Perognathus longimembris pacificus (Pacific pocket mouse): 125358187
Help
Entry
125358187 CDS
T08928
Symbol
Rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125358187 (Rfwd3)
Enzymes [BR:
plop01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125358187 (Rfwd3)
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125358187 (Rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
Beta-prop_WDR5
EIF3I
zf-C3HC4
Beta-prop_THOC3
zf-RING_UBOX
WDR55
WD40_CDC20-Fz
zf-C3HC4_2
Beta-prop_WDR3_1st
WD40
zf-C3HC4_3
Beta-prop_EML_2
Beta-prop_WDR3_2nd
zf-rbx1
Beta-prop_WDR75_1st
WD40_WDHD1_1st
zf-RING_5
Beta-prop_ACSF4
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
zf-RING_11
Rtf2
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_2nd
zf-C3HC4_4
Nairovirus_Gn
Beta-prop_EIPR1
CFAP43_N
ANAPC4_WD40
zf-UDP
zf-RING_Vps41
zf-Nse
Beta-prop_TEP1_C
WD40_2
zf-ANAPC11
ExsD_M
Motif
Other DBs
NCBI-GeneID:
125358187
NCBI-ProteinID:
XP_048211082
LinkDB
All DBs
Position
10:8297812..8327588
Genome browser
AA seq
735 aa
AA seq
DB search
MAHEAMDYDLQDQLGDPTQPPAPAVVVNSQEGAMLQPTPPAFVDLTAEAEGVENSNPGTS
EEHRNISDANHRTRASSLASMTNFITGLQRLHGMLESLRPLPLNINHSGGPVRIRRRRES
ASHRARGGASQRTGNARSRAPLDAYFQVSRTQPQLPATPPDSETRNPGSEDTHVSGGSHS
DSESSVENEEVAVQAEEPGAVIPEEQGRVTSAQEEVTLTSEGEALSKQQSPQKSVPLGEE
EEEDEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISKWLKGQTRKCPQCNKKAKHSD
IVVLYARTLKALDNSEEERIRSDLLKEQTLRKKAELESAQCRLQLQVLTDECTKLHDRVQ
DLQKLIVWHRDQILRHPGCSQAALQTCPVFNQKQHKYHFQKSFTVSQTGNCRIMAYSDAM
SCLVISQPSPQAAFLPGFGIKMLSTANMKSSQYIPMHSKQIRGLAFNKQSRGLLLSASLD
NTIKLTSLETNTVVQTYNTGRPVWSCCWCLDENNYIYAGLANGSILVYDLRNTGFHMQEL
VPQKARCPLVSLSYMTRAASAAFPYGGVLAGTLESASFWEQKSDFSHWPHVLQMEPGGYV
DFQVENKTRHCLVSYRPDKIHKTVRSVLMELSYKVGDTGETLCSCQPVQTFVGGPTCKLL
TKNAIFQSPVNDGSILVCTGDETTNSAQLWSACSGSVLQTLKCDQPVLDICPFGVNNNSY
LATLTEKTVHIYKWE
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgaagcaatggactacgatctacaggaccagttaggtgatcctacccaacca
cctgctcctgctgtagtggtcaacagtcaagagggagcaatgctccagcctactccacca
gcgtttgttgacttgactgcagaagcagagggtgtggaaaatagcaatccaggaacttca
gaggagcacaggaacatttctgatgctaaccacagaacccgagcatcttcattggcttca
atgaccaacttcatcactgggctgcagagacttcatggcatgctggaatccctgagacct
ctacctttaaatataaaccacagtggagggccagtgagaataaggaggaggagagagtct
gcttcacatagagcaagaggtggagcctctcagagaacaggcaatgctaggtcaagagca
ccactggatgcttactttcaagtcagcaggacccagcctcaattgccagccacccctcct
gattcagaaactagaaatcccggatctgaagacacacatgtatcaggtggttctcattct
gacagtgagagctctgtagagaatgaagaggtggctgttcaggcagaagaacctggagct
gttattccagaagagcaaggaagagttacctcagcacaggaagaagtgacattaaccagt
gaaggagaggccctctccaaacagcagtctcctcagaagtctgtgcctctgggtgaggag
gaggaggaagatgaaggggacacttgcacaatatgtttggaacagtggaccaatgctggg
gaccacaggctctcagcattacgttgtgggcacctttttggatatagatgcatttctaag
tggctgaaaggacagacacgaaaatgccctcagtgcaacaagaaagccaagcacagtgac
atcgttgtcctttatgcccgaaccttgaaagctctggataacagtgaagaggagcgtata
aggagtgacttactgaaggaacaaacactcagaaagaaggcagagttagaatctgcacag
tgtcgcctgcaacttcaggtcctcactgatgaatgcactaaacttcatgatcgtgtccag
gacttgcaaaaacttattgtatggcaccgggaccagattttacggcaccctgggtgctcc
caagctgctctccagacctgcccggttttcaaccagaaacagcataaataccactttcaa
aagagctttacagtgtctcagacaggaaattgccgaatcatggcatactctgatgctatg
agctgcttggtgatctcacagccttctcctcaggctgccttccttccaggctttggtata
aagatgttgagtactgccaatatgaaaagcagtcagtacattccgatgcatagcaaacag
atccgtggactggccttcaacaagcagtctagaggtttactgctttctgcttcactagat
aacactattaaacttaccagcctggagacaaatactgtagttcagacttacaatactgga
cgtcctgtatggagttgttgctggtgtcttgatgaaaacaattacatctatgctggactg
gccaatggctcaattctggtatatgatcttcgaaacacaggctttcatatgcaagaatta
gtccctcagaaagccagatgcccactggtatccctgtcatacatgaccagagctgcttca
gctgcatttccttatggtggggtgcttgctggaactttggagagtgcttctttctgggaa
cagaaatcagatttttctcattggcctcatgtgctacaaatggagccagggggctatgtg
gactttcaggtggagaacaaaacccggcactgtcttgtaagctacagacctgataaaatc
cacaagaccgtgcgaagtgtactgatggaactatcctacaaagtgggtgatactggagag
acactgtgctcctgccagcctgtgcagacatttgttgggggacccacttgcaaactattg
accaaaaatgccattttccaaagtccagtgaatgatggcagcatcttggtgtgtactgga
gatgaaacaacaaattctgcccagctctggagtgcttgcagtggctcagtactacagacc
ctgaaatgtgatcaacctgtcttggacatctgcccatttggtgtgaataataacagctac
ttggctaccttaactgagaagactgtccatatctataaatgggagtga
DBGET
integrated database retrieval system
