Perognathus longimembris pacificus (Pacific pocket mouse): 125358193
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Entry
125358193 CDS
T08928
Symbol
Ddx19b
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125358193 (Ddx19b)
03015 mRNA surveillance pathway
125358193 (Ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125358193 (Ddx19b)
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125358193 (Ddx19b)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125358193 (Ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125358193
NCBI-ProteinID:
XP_048211093
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All DBs
Position
10:8530160..8542232
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AA seq
479 aa
AA seq
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MATDSWALAVDEQEAAAASLSNLHLKEEKIKPDINGAVVKTNANAEKTDEEEKEDRAAQS
LLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELHLKPQLLQGVYAMGFNRPSKIQE
NALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRYPQCLCLSPTYELALQTGK
VIEQMGKFYPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWQFAQKVVPDPNIIKLKRE
EETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQV
ALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNKIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggccacggactcgtgggccctggcggtggacgagcaggaagcggcggctgcgtcgttg
agcaacttgcatcttaaggaagagaaaatcaaaccagacatcaatggtgctgttgtcaag
accaatgctaatgcagagaagacagatgaagaagagaaagaggacagagctgcgcagtct
ttactcaataagctgatcagaagcaaccttgtggataacacaaaccaagtggaagtcctg
cagcgggatcccaactccccactctactccgtgaagtcttttgaagagcttcacctgaaa
ccacagcttctccagggagtgtatgctatgggtttcaaccgtccatccaaaatacaagag
aatgcattgcctttgatgcttgctgaacctccacagaacttaattgcccagtctcagtct
ggtactggaaaaactgctgccttcgtgttggccatgctcagtcaagttgaacctgcaaac
agatacccccagtgcctgtgcctctctccaacatatgagctggcacttcagacaggaaaa
gtcattgagcagatgggcaaattttatcctgaactgaagttagcttatgctgttcgaggc
aataaattggaaagaggtcaaaagatcagtgagcagattgtcattggcactccggggact
gtcctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgtt
ctggatgaggcagacgtgatgatagctactcagggccaccaggaccaaagcatccgcatc
cagaggatgctgcccaagaactgccagatgctgcttttctctgccacttttgaagactcg
gtgtggcagtttgcccagaaggtggtcccggaccccaatattatcaaactgaagcgcgaa
gaggagacgttggacaccatcaagcagtactacgtcctgtgcaataacagagatgagaag
ttccaggccttgtgcaacctgtatggggccatcaccatcgctcaagccatgatcttctgc
catacccgcaaaactgccagctggctggcagcagagctctccaaagaagggcaccaggtg
gctctgctgagtggcgagatgatggtggagcagagggctgccgtgattgagcgcttccga
gaaggcaaagagaaagttctagtgaccaccaatgtgtgcgcccgggggatcgatgttgaa
caagtgtctgttgtcatcaacttcgaccttcctgtggacaaggatgggaaccccgacaat
gagacctacctgcaccggatcggccgcaccggccgctttggcaaaagaggcctggccgtg
aacatggttgacagcaagcacagcatgaacatcctgaacaaaatccaggagcattttaat
aagaagatagaaagattggatacggatgacttggatgagattgaaaagatagctaactga
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