Perognathus longimembris pacificus (Pacific pocket mouse): 125358194
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Entry
125358194 CDS
T08928
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125358194
03015 mRNA surveillance pathway
125358194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125358194
Enzymes [BR:
plop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
125358194
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
125358194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
125358194
NCBI-ProteinID:
XP_048211094
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All DBs
Position
10:8548354..8568403
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AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMNSLQIKEEKVKADTNGVIKTSTPAEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPADRYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEDSVWQFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNNRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNKIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggccctagcggtggacgagcaagaagcggctgtcaaatcgatg
aacagcttacagatcaaagaagagaaagtcaaagcagacactaatggtgttatcaaaacc
agtactcctgcggagaagacagatgaagaggagaaagaggacagagctgcgcagtcttta
ctcaataagctgatcagaagcaaccttgtggataacacaaaccaagtggaagtcctgcag
cgggatcccaactccccgctctactcggtgaaatcttttgaagagcttcgcctgaagcca
cagcttctgcaaggcgtgtacgccatgggcttcaaccgaccatctaagatacaagagaat
gcattacccatgatgcttgctgaacccccacagaacctaattgcccagtcccagtctggc
actggaaaaacagctgcctttgtcctggccatgctcagcagagttgaaccagcagacaga
taccctcagtgtctgtgcctctccccaacctatgagctggcacttcaaacaggaaaagtg
atcgagcagatgggaaaatttcatccagaactaaagcttgcctatgccgttcgtggcaat
aaattggaaagaggtcagaagatcagtgagcagattgtcattggcactccggggactgtc
ctggactggtgctccaagctcaagttcattgaccccaagaagatcaaggtgtttgttctg
gatgaggcagacgtgatgatagctactcagggccaccaggaccaaagcatccgcatccag
aggatgctgcccaagaactgccagatgctgcttttctctgccacttttgaagactcggtg
tggcagtttgcccagaaggtggtcccggaccccaatattatcaaactgaagcgcgaagag
gagacgttggacaccatcaagcagtactacgtcctgtgcaataacagagatgagaagttc
caggccttgtgcaacctgtatggggccatcaccatcgctcaagccatgatcttctgccat
acccgcaaaactgccagctggctggcagcagagctctccaaagaagggcaccaggtggct
ctgctgagtggcgagatgatggtggagcagagggctgccgtgattgagcgcttccgagaa
ggcaaagagaaagttctagtgaccaccaatgtgtgcgcccgggggatcgatgttgaacaa
gtgtctgttgtcatcaacttcgaccttcctgtggacaaggatgggaaccccgacaatgag
acctacctgcaccggatcggccgcaccggccgctttggcaaaagaggcctggccgtgaac
atggttgacagcaagcacagcatgaacatcctgaacaaaatccaggagcattttaataag
aagatagaaagattggatacggatgacttggatgagattgaaaagatagctaactga
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