Perognathus longimembris pacificus (Pacific pocket mouse): 125358197
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Entry
125358197 CDS
T08928
Symbol
Exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125358197 (Exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125358197 (Exosc6)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125358197 (Exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
125358197
NCBI-ProteinID:
XP_048211096
LinkDB
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Position
10:complement(8505666..8507188)
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AA seq
272 aa
AA seq
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MPGDHRRIRGPEESQPPQLYAADEDEEPAARDPTRLRPVYARAGLLSQAKGSAYLEAGGT
KVLCAVSGPRQAEGGERGGGPAGTGGEAPAALRGRLVCDFRRAPFSGRRRRAPPGGGEER
ELALALQEALEPAVRLGRYPRAQLEVSALLLEDGGSALGAALTAAALALADAGVEMYDLV
VGCGLSLAPGPAPTWLLDPTRLEEEHAAAGLTVALMPVLNQVAGVLGSGEGGQTESWAEA
VRLGLEGCQRLYPVLQQCLVRAARRRGAASPS
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgcccggggaccaccgccgcatccgcgggccggaggagtcccagcctccgcagctgtac
gccgccgacgaggacgaggagcccgccgcccgtgacccgacgcggctgcggccggtgtac
gcgcgcgccgggctgctgagccaggccaagggctcggcctacctggaggcgggcggcacc
aaggtgctgtgcgccgtgtcgggcccgcgccaggccgagggcggggagcgcggcggcggc
ccggccgggacggggggcgaagccccggccgcgctgcgcggccgcctggtctgcgacttc
cgccgcgcgcccttctcggggcgccggcgccgcgcgcccccgggcggcggcgaggagcgc
gagctggcgctggcgctgcaggaggcgctggagcccgcggtgcgcctgggccggtacccg
cgcgcgcagctcgaggtgtcggcgctgctgctggaggacggcggctcggcgctgggcgcc
gcgctcacggccgccgcgctcgccctggccgacgcgggagtggagatgtacgacctggtg
gtgggttgcggcctgagcctcgcgccggggcccgcgcccacctggctgctggatcccacg
aggctcgaggaggagcacgccgccgccggcctcaccgtggccctcatgccggtcctcaac
caggtggccggggtgctaggcagcggggaaggcggccagactgagagctgggccgaggcc
gtgcgcctgggcctcgagggctgccagcggctctacccggtgctgcagcagtgtctggtg
cgggctgcccgtcggaggggcgccgcctccccttcctaa
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