Perognathus longimembris pacificus (Pacific pocket mouse): 125358215
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Entry
125358215 CDS
T08928
Symbol
Atxn1l
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04330
Notch signaling pathway
plop05017
Spinocerebellar ataxia
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
125358215 (Atxn1l)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
125358215 (Atxn1l)
05022 Pathways of neurodegeneration - multiple diseases
125358215 (Atxn1l)
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Gene cluster
GFIT
Motif
Pfam:
AXH
ATXN-1_C
Motif
Other DBs
NCBI-GeneID:
125358215
NCBI-ProteinID:
XP_048211134
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Position
10:9533280..9540028
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AA seq
689 aa
AA seq
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MKPVHERSQECLPPKKRDLPVTSEDMGRTTSCSTNHTPSSDASEWSRGVVVAGQSQAGGR
VSVGGDGAEAITGLTVDQYGMLYKVAVPPATFSPTGLPSVVNMSPMPPTFNVASSLIQHP
GLHYPPIHYAQLPSTSLQFIGSPYSLPYAVPPNFLPGPLLSPSANLATSHLPHFVPYASL
LAEEATPPPQASSPAHSFSKAPVTSPSGQLPHHSSTQPLDLAPGRMPIYYQMSRLPAGYT
LHEAPPVGANPILAPQESQSALEAAAANGGQRQRERNSVRRESEALDSPSSKGESQGLVP
VVECVVDGQLFSGSQTPRVEVVAPTHRGTPDTDLEVQRVVGALASQDYRVVAAQRKDEPS
PLNLSHHTPDHQGEGRGSARNPVELAEKNQARGFYPQSYQEPVKHRPLPKAMVVANGNLV
PPGTDPSLLPVSSEILVASSLDMQARATFPDKEPTPPPITSSHLPSHFMKGAIIQLATGE
LKRVEDLQTQDFVRSAEVSGGLKIDSSTVVDIQESQWPGFVLLHFVVGEQQSKVSIEVPP
EHPFFVYGQGWSSCSPGRTAQLFSLPCHRLQVGDVCISISLQSLNSNSVSQASCVPPGQL
GPPRERPERTVLGPRENLCDSEGKSQPAGEGSHVVEPSQSEPGAQACWPAPTFQRYSIQG
EEARAALLRPSFIPQEVKLSIEGRSNAGK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaaacctgttcatgagaggagtcaggaatgccttccaccaaagaaacgagacctcccc
gtgaccagcgaggatatggggagaactaccagctgttccacaaaccacacaccctccagt
gatgcctctgagtggtcccgaggggttgtggtcgctgggcagagccaggctggaggcaga
gtcagcgtggggggtgatggagctgaggccatcactggcctgacagtagaccagtatggc
atgctctataaggtggctgtgccacctgccacgttctcaccaactggcctcccatccgta
gtgaacatgagccccatgcctcccacgtttaatgtagcgtcttcactgattcaacatcca
ggactccactatcccccaattcactatgctcagctcccgtccacctcgctgcagttcatc
gggtctccttacagccttccctatgctgtgccacccaacttcctaccaggtcccctcctc
tctccttctgccaacctcgccacctctcaccttccacactttgtgccatatgcctcactt
ctggcagaagaagccactcctcctccccaggcttcatccccagctcattcatttagcaaa
gctcctgtcacctccccgtccggccagttgcctcatcactcgagtactcagccactggac
cttgctccaggccggatgcccatttattatcagatgtctaggctacccgctgggtataca
ttgcatgaagcccctccagtaggtgccaacccaattcttgcccctcaggagagccagtct
gctctcgaagcagctgctgccaatggaggacagagacaacgagagcgaaattcagtaaga
cgggaaagtgaagcacttgactcccccagcagcaagggtgaaagtcaaggactggtgccg
gtggtagaatgtgtggtagatggacagttgttttcaggttctcagactccacgggtggag
gtggtggcgccgacacaccgagggaccccagacaccgacctcgaggtccagcgtgtggtt
ggcgctttagcttctcaggactatcgtgtggtggcagctcagaggaaggatgaacccagc
cctctcaacctatcccatcatacccctgaccatcagggtgagggacgaggatcagccagg
aaccctgtagagctggcagagaagaatcaggcccgtgggttctaccctcagtcctatcag
gaaccggtgaaacacagacctttacccaaagcaatggttgtagccaatggcaacctggtg
ccccctggaactgacccaagcctactgcctgtgagctcagaaatcctcgtggcatcaagt
ctagacatgcaggccagagccactttcccagacaaggagccaacaccaccccccattacc
tcctcccacttgccctcccatttcatgaaaggcgccatcatccagctggctacaggggag
ctgaagcgagtggaggacctccagacccaggattttgtgcgcagtgccgaagtgagtggg
gggctgaagattgactctagcacagttgtggacatccaagagagccagtggcctggattt
gtcttgctgcattttgtggttggtgagcagcagagcaaagtgagcatcgaggtgccccct
gagcaccccttcttcgtatatggccagggttggtcctcctgcagccctgggcggactgca
caactcttctctctgccctgccatcggctacaggtgggagatgtctgcatctctatcagt
ttacagagcttgaacagtaactcagtttctcaggccagctgtgttcccccaggccagctg
ggtccccctcgagaaaggcctgagaggacagtcttggggcccagagaaaacttatgtgac
agtgaggggaagagccagcccgcaggagagggctcccatgtggtagagccctcccagtct
gagcctggtgctcaggcctgctggccagcccccaccttccaaagatacagcatccaaggg
gaggaggcacgggctgcgctgctccgtccctctttcattccacaggaggtaaagctgtct
atcgaagggcgttccaatgcgggaaaatga
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