Perognathus longimembris pacificus (Pacific pocket mouse): 125358255
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Entry
125358255 CDS
T08928
Symbol
Cdh3
Name
(RefSeq) cadherin-3 isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
125358255 (Cdh3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125358255 (Cdh3)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125358255 (Cdh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_2
Cadherin_4
BACON_2
Motif
Other DBs
NCBI-GeneID:
125358255
NCBI-ProteinID:
XP_048211203
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All DBs
Position
10:complement(12047513..12085047)
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AA seq
828 aa
AA seq
DB search
MGLLRRRLAPLLLLFQAQVCWPRCAASEPCPPSIGAAEVTLEAASTELQPGPALGPAAFT
GSPGQQGPLLGIANDDFSVLARETAQERKEAEVSPLKRILRRRKREWVVPPISVPENGKG
PFPQRLNQLKSNKDRGTKIFYSITGPGADSPPEGIFSIEKETGWLLLNKPLDREMIAKYE
LFGHAVSENGASVEDPMNISVIVTDQNDHKPKFTQDVFRGSVLEGVLPGTSVMQVTATDE
DDAINTYNGVIAYTIHSQEPKDPHDLMFTVHRSTGTISVISSGLDREKIPEYTLTIHATD
LDGDGSSATAVAIIEILDANDNAPMFKPQKYEARVPENKVGQEVQRLTVTDLDAPSSPAW
RASYRIVGGDAADHFTITTHPESNQGILTTRKGLDFEAQNQHTLYIEVTNEAPFMVMLPT
STATVVVYVEDVNEAPVFVPPTKVIEAQEGISVGETVCVYTAQDPDKEGQQISYHILRDP
AEWLAVDPDSGQVTAAGTLDREDERFVKNNVYEVMVLATDNGSPPATGTGTLLLTLTDIN
DHGPLPEPRQITICNQSPVPQVLNITDKDLSPHSSPFQAQLMHDSDIHWMAEVNEKGDTV
ALSLKKFLKQDEYDVYLSLSDLGNKEQLTVIRATVCDCQGHVEACPEPWKGSFVFPILGA
ILALLFLLLVLLLLVRRKRKVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGL
EARPEVALRNDVAPTFIPTPMYRPRPANPDEISNFITENLKLANTDPTAPPYDSLLVFDY
EGSGSDAASLSSLTSSASDLDQDYDYLSEWGSRFKKLADMYGGGDDED
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggggctcctccgaaggcgcctcgcgcccctcctcctcctcttccaggcacaggtttgc
tggcctcggtgcgcagcctccgagccgtgcccgccgagtatcggggcggctgaagtgacc
ttggaggcggccagcaccgagctgcagcccggcccggcgctggggccagcagcatttacc
ggctctcctgggcaacaggggcccctgctcggcattgctaatgacgacttcagtgtcctg
gcccgggaaactgcccaggaaaggaaggaagcagaggtctccccattaaaacggatctta
cgaagacgcaagcgagagtgggtggtgccacctatatctgttcctgagaatggcaagggc
cctttcccccagaggctgaatcagctcaagtctaataaggacagaggcaccaagattttc
tatagcatcacagggcctggagcagacagcccccctgagggcatcttctccatagagaag
gagacaggctggctgctgctgaacaaaccactggaccgggagatgatcgccaagtatgag
ctcttcggccatgccgtgtcggagaatggggcctcagtggaggatcccatgaacatatcg
gtcatcgtgacagaccagaacgaccacaaacccaagttcacccaggatgtcttcagaggg
agtgtcttggagggggtgctgcctggaacttctgtgatgcaggtgacagccacggacgag
gatgacgccatcaacacgtacaacggcgtgattgcctacaccatccacagccaggaaccc
aaggacccgcatgacctcatgttcactgtccaccgcagcaccggcactatcagtgtcatc
tccagtggcctggaccgggagaaaatccctgagtacacgctaaccatccacgctacagac
ctggacggggacgggtcctctgccacagcagtggccatcatagagattcttgatgccaat
gacaacgctcccatgtttaagccccagaagtacgaggcccgagtgcctgagaacaaagta
ggccaggaggtgcagaggctgacggtgaccgacctggatgcccccagctctccagcgtgg
cgggcctcctaccgcatcgtggggggtgacgccgcagaccatttcaccatcaccacgcac
cccgagagcaaccagggcatcctgaccaccagaaagggcttggactttgaggcccagaac
cagcacaccttgtacatcgaagtgaccaacgaggcacccttcatggtgatgctccccacc
tccacagccaccgttgtggtctacgtggaagatgtgaatgaggcccccgtgtttgtcccg
cctaccaaagtcattgaggcccaggagggcatctccgtcggggagactgtctgtgtctac
actgcacaagaccctgacaaggagggtcagcagatcagctaccacatcctgagagacccc
gcagagtggctggccgtggacccagacagcggacaggtcactgccgcaggcacattagac
cgagaagatgagcggtttgtaaagaacaacgtctatgaagtcatggtcttggccacggac
aatgggagcccacctgctactggcacggggaccctcctactgacacttacggacatcaac
gaccatggcccgctccccgaaccccgtcagatcaccatctgcaaccaaagcccggtgcct
caagtgctgaacatcacagacaaggacctgtcaccccactcctcccctttccaggctcag
ctcatgcacgactcagacatccactggatggcagaggtcaatgaaaaaggagacacggtg
gccttgtccctgaagaagttcctgaagcaagacgagtatgatgtgtacctctctctctct
gacctcggcaataaggaacagctgacagtgatcagggccactgtgtgtgactgccagggc
cacgtggaagcctgtccggagccctggaagggcagtttcgtcttccctatcctgggggct
atcctggccctgctgttccttctgctggttctcctcctactggtgagaaggaagcggaag
gtcaaagagcccctcctgcttccggaagatgacacgcgcgacaatgtcttctactacggc
gaggagggtggtggcgaggaggaccaggactatgacatcactcagctgcaccgggggctg
gaggccaggcctgaggtagcccttcgtaacgacgtggcgcccaccttcatccccacgccc
atgtaccgcccccggcccgccaatcctgatgagatcagcaacttcatcactgagaacctg
aagttggccaacacggaccccacggccccaccctacgactccctgctggtgttcgactac
gagggcagtggctcggacgccgcgtcgctcagctccctcacgtcctccgcctccgacctg
gaccaggactacgactacctgagcgagtggggcagccgcttcaagaagctggccgacatg
tacggcggcggcgacgacgaggactaa
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