Perognathus longimembris pacificus (Pacific pocket mouse): 125358303
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Entry
125358303 CDS
T08928
Name
(RefSeq) F-box/LRR-repeat protein 2-like isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125358303
Ubiquitin system [BR:
plop04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
125358303
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GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
LRR_Zer-1
F-box-like
LRR_14
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
125358303
NCBI-ProteinID:
XP_048211306
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Position
10:13113339..13136131
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AA seq
618 aa
AA seq
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MAESLPLEMLTYILSFLPLSDQKEASLVNRAWYCAAQNALRETKVRYNIPVSSASLSAIK
SLGLRGISCISLTNLDGSPASHQVLQSIAYHLGPHLQSLCLSGGSPTEASFVALVLRCPA
LRILDLSGCNSLFTSGMLLAQPETAQRVRQALSGLRELNLAGLRDLTDLSFNQLSSCVPS
LERLSLAYCHLTFESSPTWGPQGSPPFELSFQNLLKFVKERAGSLRALDLSGTGLPPEAL
KALSQVTGLQLQELSLHSCRDLSTEAVATLCRQQPGLTSLDLSGCSELTDGALLAVSRSL
RHLRHLSLGKLQRLTDAGCTALGGLRELQSLDMAECCLVSGRELAQALGTVRGTPPPLTS
LRLAYCSSLKDASVLSMIPVLSSNLRVLDLSSCVALTNRTMQAICYYLTHLSVLRLAWCK
ELCDWGLLGLEEPNEKPALGPQSHPELKHQASDSTDLSPKSQGPSLLMLQALQELDLTAC
SKLTDASLAKVLQFPQLRRLSLSLLPALTDMGLVAVARGCPSLERLVLSHCSHLSDEGWA
QAARFWPRLQHINLSSCSQLTEQTLDTITQTCKQLQVLDVAMCPGINIAAVRRFQEQLPQ
VTCIQSRFVGGADLTLTL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtcgctgcccctggagatgctcacatatattctgagtttcctgcctctgtca
gatcagaaagaggcctccctggtgaaccgggcttggtactgtgcagcccagaatgccctt
cgagagacaaaagtgcggtacaacatccctgtgtcctctgcctcactctcggctatcaag
agcttgggcctccggggcatctcctgcatcagcttgaccaacctggatggctcacccgcc
tcccaccaggtgctgcagtccattgcctaccacctcggcccacacctgcagagcctgtgc
ctgagtgggggcagtcccacagaggcctcctttgtggctctggtcctgcgatgcccagcc
ttgcgcatccttgacctcagtggctgcaacagcctctttacatcaggcatgctactggct
cagcctgagacagcacagcgtgtacggcaggcactgagtggcctccgtgagctcaacctg
gccggcctgcgggacctgactgacctcagcttcaaccagctcagcagctgtgtacccagc
ttggaacgcctctctttggcttactgccaccttacctttgagtcaagcccaacttggggt
ccccagggctctcctccctttgaactatccttccaaaacctgctgaaattcgttaaggag
cgggctggcagtttgcgtgccctggacctaagtggcactggcttaccacctgaggcccta
aaggccctcagccaggtgactgggctgcagctgcaggagctgagcctgcacagctgccgg
gacctctctacagaggcggtggccactctgtgccgtcagcaacctggccttacgtccctg
gacctcagcggctgctcagaactgacagatggggcgcttttggctgtgagcaggagccta
cggcatctgcggcacctgagcctggggaagctgcagcggctgacagatgcggggtgtaca
gccctggggggcctgagggagttgcaaagcctggacatggctgaatgctgcttggtgagc
gggcgggagttggcccaggccctgggcacagtacgcggaactccacccccactgacctct
ctcaggctggcctactgttcttcactgaaggatgcatccgtgctctccatgatcccagtg
ctgagctcaaacctgagggtgctagacttgtcctcttgtgtggccctcaccaaccggacc
atgcaggccatctgctactacctcacccacctctcagtcctgcgcctggcttggtgcaag
gagctctgtgactgggggcttctggggctagaggaaccaaatgagaagcctgcattaggc
ccccagtcacacccagagctgaaacatcaggcctcagactctacggacctttctcccaaa
tcacagggcccctccctgctcatgctgcaggccctccaggagttggacctcacagcctgc
agcaagctgaccgatgccagtttagccaaggtgcttcagttcccccagctgaggaggttg
tcactgagcctattgccagcactcacagacatgggtttggtggctgtggccaggggctgc
cccagtctggagcgtttggtgctgagtcactgcagccatcttagtgatgagggctgggcc
caggcagccaggttctggccaaggttgcagcacatcaacctatccagctgtagtcaactc
acagagcaaacactggataccattactcagacatgcaagcagctccaagtgttggatgtg
gccatgtgtcctggtatcaacatagcagctgtcaggcgctttcaagaacagctgcctcag
gtgacctgcatccagtctcgcttcgtaggaggggctgacctgaccctcacactctaa
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