Perognathus longimembris pacificus (Pacific pocket mouse): 125358309
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Entry
125358309 CDS
T08928
Symbol
Phaf1
Name
(RefSeq) phagosome assembly factor 1
KO
K27411
phagosome assembly factor 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125358309 (Phaf1)
Membrane trafficking [BR:
plop04131
]
Autophagy
Other autophagy associated proteins
Others
125358309 (Phaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHAF1
Motif
Other DBs
NCBI-GeneID:
125358309
NCBI-ProteinID:
XP_048211327
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All DBs
Position
10:complement(13187523..13211282)
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AA seq
422 aa
AA seq
DB search
MLDLEVVPERSLGNEQWEFTLGMPLAQAVAILQKHCRIIKNVQVLYSEQSPLSHDLILNL
TQDGIKLLFDAFNQRLKVIEVYDLTKVKLKYCGVHFNSQAIAPTIEQIDQSFGATHPGVY
NSAEQLFHLNFRGLSFSFQLDSWTEAPKYEPNFAHGLASLQIPHGATVKRMYIYSGNSLQ
DTKAPVMPLSCFLGNVYAESVDVLRDRTGPSGLRLRLLAAGCGPGLLADAKMRVFERSVY
FGDSCQDVLSMLGSPHKVFYKSEDKMKIHSPSPHKQVPSKCNDYFFNYFTLGVDILFDAN
THKVKKFVLHTNYPGHYNFNIYHRCEFKIPLAIKKENEDGQTETCTTYSKWDNIQELLGH
PVEKPVVLHRSSSPNNTNPFGSTFCFGLQRMIFEVMQNNHIASVTLYGPSRPGAHLRTAE
LP
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgctggacctggaagtggtgcctgaacgctctctggggaacgagcaatgggaattcacg
ctgggaatgcctctggctcaggcagtagctattcttcagaagcactgccgcatcatcaaa
aatgtccaggttctctacagtgagcagtctcctctaagccatgacctcatccttaacctg
actcaggacgggatcaaactactgtttgatgctttcaatcagagacttaaggtgattgaa
gtatatgacttgactaaagtaaagttaaaatattgtggagtgcattttaactctcaggcc
atagctcccaccattgagcaaattgatcagtcttttggagcaacccatcctggagtatac
aactctgctgagcagctcttccatctcaacttcagaggactatctttctcatttcagcta
gactcatggactgaagctcccaagtatgagcccaactttgcccatggtctagcttctctc
caaataccccatggagcaactgtaaaaagaatgtatatctacagtgggaatagcctacag
gataccaaggctcctgtgatgcccctgagctgtttcctgggcaacgtatatgctgagagt
gtagatgttcttcgagatcgaacaggaccatcaggtttacggcttcgcctacttgctgca
ggctgtggacctggcctattagcagatgcgaagatgcgggtatttgaacgctcggtgtat
tttggtgattcctgtcaagatgttctaagcatgcttggttctccacacaaggtcttctat
aaatcagaagacaagatgaaaattcattctccctctcctcataaacaagtcccatctaag
tgcaatgactacttttttaattacttcactcttggagtggatatcctctttgatgcgaat
acacacaaagtaaagaagtttgtcctgcataccaattaccctgggcattataattttaac
atctatcaccgctgtgagttcaagatcccattagccataaagaaagaaaacgaagatggt
cagacagaaacatgcaccacctacagtaagtgggacaatattcaggagctcctgggccac
cctgtggagaagcctgttgttctacataggtcctcttctccaaacaacaccaacccgttt
ggctccacattctgctttggtctccagaggatgatctttgaggtcatgcagaacaaccac
attgcctcagtgactctttatggcccctctaggcctggtgcccatctgagaacagcagag
ctcccctag
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