Perognathus longimembris pacificus (Pacific pocket mouse): 125358317
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Entry
125358317 CDS
T08928
Symbol
Cdh16
Name
(RefSeq) cadherin-16
KO
K06810
cadherin 16, KSP-cadherin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125358317 (Cdh16)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125358317 (Cdh16)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
125358317
NCBI-ProteinID:
XP_048211335
LinkDB
All DBs
Position
10:13522163..13531709
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AA seq
863 aa
AA seq
DB search
MQTYRRSLCLCLWDGTPLAIHLGWIFTSTSPRPILIMALAWLWLLCLSTSQAEAQAAELY
VEVPENYGGSFPLYLVKLPLPPKEAGSHIVLSESLDVAAEAPFAVDPDSGFLLATRALDR
EEKAEYQLQVTLESDDGRILWGPQPIIVLVKDENDQVPHFSQTVYRAQLSQGTRPGVPFL
FLEATDGDEPGTANSDLRFHILSQAPAQPSPDLFLLEPQLGALALSSEGSSSLDHALEAS
YQLLVQVKDMGDQATGHQATATVEISILENTWVPVEPIHLVENLKVPYPHRIAQVHWSGG
NVHYYLDSQPPGPFSVDAEGEIRVTRELDREAQAEYLLQVRAQNSRGEDYTEPLELRVVV
MDENDNAPVCSPHGPSISIPELSPPGTEVIKLSAEDADAPGSPNSHIVYRLLSPEPEEET
EERTFQLDPTSGSITLGTIPLQAGQNIRLQVLATDLAGAEGGLSSTCEVEVSVMDINDHA
PEFTTSQIGPVNLPEDAEPGTLVATLMATDADLEPAFRLMDFAIEAGDPEGIFGLDGEPD
SSHVQLRLRKNLSYETAPHHEVVVVVRNVEELVGPGPGPASTATVTVLVERVIPPLKLDQ
ESYEANVPVSTPAGSLLLTIQSSYPRSRPLRFSLVNDSEGWLCIKEASGEVHTAQSLKGA
RPGDTYTVLVEAEDTDEPGLSTSATLMVHFLKAPPIPALSLAPTPSRHLCTPRQDYGVVI
SGPSEDSNLSSGHGPYSFALGPNPTVQRDWRLQPFNDSHAYLTLALHWVEPGEHMVPVVV
QHNTQTWQIMVRVIVCRCNVDGQCLRKVGHMKGMPTKLTAVGVLVGTLAAIGFFLILIFT
HLALARKKDLDQPADSMPLKATV
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgcagacctacagaagatctctctgcctgtgtttatgggatggaacccctcttgccatc
catctgggctggattttcacttccacatcccccaggcccatcctgattatggcccttgcc
tggctgtggctgctttgtctctccacttcccaggctgaggcccaggctgcagagctgtat
gtggaagtccctgaaaactatggtggaagtttccctttgtacctggtcaagctaccactg
ccccccaaagaggctggaagccacattgtgctgtcagagagcttagatgtggcagcggaa
gccccttttgctgtggatccagattctggcttcctgttagcaaccagagccctagaccga
gaagaaaaggcagagtaccaactacaggtcaccttggagtctgatgatggacgtatcttg
tggggcccacagcctataattgtgcttgtgaaggatgagaatgaccaggtgcctcacttc
tcccagactgtctacagagctcagctgagccagggcaccaggcctggtgtccccttcctc
ttccttgaggcgactgatggggatgaaccaggaactgccaactcagaccttcgattccac
atcctgagccaggccccagcccaaccttcgccagacttgttcctactggagcctcagctg
ggagctctggcactcagctctgagggaagctccagcctagaccatgccctagaagcatcc
taccagctcttggtacaggtcaaggacatgggtgaccaggccacaggccaccaggccacc
gctactgtagagatctccatactagagaacacctgggtgcccgtagagcctattcacctg
gtggagaacctcaaagtcccatatccacaccgaattgcccaggttcactggagtggaggg
aatgtgcactattacctggacagccagcctcctgggcctttcagtgtggatgcagagggg
gagatccgtgtgaccagggagctggaccgggaggcccaagctgagtacctgctccaggtg
cgagctcagaattcccgtggtgaggactacacagaacccctggagttgcgtgtggtggtg
atggatgagaacgacaacgcacctgtttgctcccctcatggtccttcaatcagcatccct
gaactcagccccccaggtactgaagtgattaagctgtcagcagaggatgcagatgcccct
ggctctcccaactctcacattgtatatcggctgctgagccctgagcccgaggaggagacg
gaagagagaacctttcagctggatcccacttcaggaagtatcacattggggactatccca
ctccaagctggccagaacattcggcttcaagtgctggccactgacctggcaggagcagag
ggtggcctcagcagcacatgtgaagttgaagtctcagtcatggacatcaatgaccatgct
cctgaattcaccacttcccagattgggcctgtgaacctccctgaggatgcggaacccggg
accctggtggccacgctcatggccactgatgctgatctcgagcctgccttccgtctcatg
gactttgccattgaggcgggagacccagaagggatctttggcttggatggagagccagat
tctagtcatgtccaactgagactccgcaagaacctcagctatgagacagctcctcatcat
gaggtggtggtggtagtgcgaaatgtggaagaacttgtgggccctggcccaggacccgca
tccacggccactgtcactgtgctggtggaaagagtgataccccccctcaagctggaccag
gagagctatgaggctaatgtcccagtcagcaccccagccggttccctcctgctgaccatc
cagtcctcataccccaggagcagacctctcaggttctccctggtcaatgactcagagggt
tggctctgtatcaaagaggcctccggagaggtccacacagcccagtccctgaagggtgcc
cggcctggagacacatacacagtgcttgtggaggccgaggacacagatgagccaggactg
agcacctctgccaccctcatggtccacttcctgaaggcccctccgatcccggccctgtct
ctggcccccacgccatcccgacatctctgcacaccccgccaggactatggcgtggtcatc
agtggacccagcgaggactccaacctgtccagtgggcacggcccctacagctttgcactt
ggtcccaaccccacagtacagcgagattggcgtctccagcctttcaatgattcccatgcc
tacctcaccctggccctgcactgggtggagccaggtgaacatatggttccagtggttgtt
caacacaatacccagacatggcagatcatggtccgagtgatcgtgtgtcgttgcaatgtg
gatgggcagtgcctgcgcaaggtgggccacatgaaaggcatgcctacgaagctgacagca
gtgggtgtccttgtaggcactctggcagccataggcttcttccttatcctcatcttcacc
cacctggccttggcaagaaagaaggacctggatcaaccagcggacagcatgcccctgaag
gcgactgtctga
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