Perognathus longimembris pacificus (Pacific pocket mouse): 125358449
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Entry
125358449 CDS
T08928
Symbol
Irx3
Name
(RefSeq) iroquois-class homeodomain protein IRX-3 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125358449 (Irx3)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
125358449 (Irx3)
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BUD22
MRP-S32
Motif
Other DBs
NCBI-GeneID:
125358449
NCBI-ProteinID:
XP_048211538
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Position
10:22682056..22685229
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AA seq
505 aa
AA seq
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MSFPQLGYQYIRPLYPPERPGAAAGGGSAGARGGPGAGASELAASGSLSNVLSSVYGAPY
AAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQHPAAAAAFPHPHPAFYPY
GQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEEDEEDGKRELELEEEELGGEEEDT
GGEGLAEDDEDEEIDLENLDGAAAGAELTLAGAARRDGDLGLRPISDSKNSDSEDSSESL
EERPLPILNLAPAPPTAASTPPSPTSPPTGLDACAPAPPPSSALQKPKIWSLAETATSPD
NPRRSPPGAGGSPPGAAVAPAALQLSPAAAAAAAAAHRLVSAPLGKFPSWTNRPFPGPPP
GPRPHPLSLLGSAPPHLLGLPGATGHPAATAVAAYARPAEPEGGTDRYSALEVEKKLLKT
AFQPVPRRPQNHLDAALVLSALSSS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccccagctcggataccagtatatccgccctctctacccacccgagcgcccg
ggagcggcagcgggcggcggcagcgccggggcccggggtggcccgggcgccggagcctcg
gagctggcggcctccggctccctatccaacgtgctctcgtcggtgtacggggcgccctac
gccgcggctgccgctgcggccgccgccgctcagggctatggagccttcctgccctacgcc
gcggagctgcccatcttcccgcagctgggcgcccagtacgagctgaaggacagccccggg
gtgcagcatccggccgcggccgctgcgtttccgcacccgcaccccgctttctacccgtac
ggccagtaccagttcggggacccgtcccgtcccaagaacgccacccgggagagcaccagc
accctcaaggcctggctcaacgagcaccgaaagaacccctaccccaccaagggcgagaag
atcatgctggccatcatcaccaagatgaccctcacccaggtgtccacctggttcgccaac
gcgcgccggcgcctcaagaaggagaacaagatgacgtgggcgccccgcagccgcaccgac
gaagagggcaacgcttacgggagtgagcgggaggaagaagacgaagaggaagacgaggaa
gatggcaaacgcgagctggagttggaggaggaggagctcggaggggaggaggaggacacg
gggggcgaggggctggcagaggacgacgaagacgaggagatcgatctggagaacttggac
ggcgcggcggctggggctgagctgaccctagctggggcagcgcgtagggacggcgacctc
gggctgagacccatttcggactccaaaaatagcgactccgaagacagctctgagagtttg
gaggagcggccactgccgatcctgaacctagccccagcgccacccaccgcggcctcgacc
ccaccgtcgccaacttcgccccccacaggcctggacgcctgcgctccagcccctccgccc
tcctccgccctgcagaagcccaaaatctggtccttggccgagacggccaccagcccagac
aacccccgtcgctcgcctcccggagcgggagggtctcctcccggggccgccgtcgcgccc
gcggccctgcagctctctccagccgcggccgctgcagccgccgccgcgcacagactcgtc
tcggcgccgcttggcaaattcccttcctggaccaaccggcccttcccaggcccgccgcct
ggcccacgcccgcacccgctctccctgctcggctcggcccctccgcacctgctgggactt
cccggagccaccggccatccggctgccacggccgtagccgcctacgctaggcccgcagaa
ccagagggcggaacagatcgctatagtgccttggaagtggagaaaaagttactcaaaaca
gctttccagccggttcccaggcggcctcaaaaccacctggatgctgctctggtcctatca
gctctctcttcgtcctag
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