Perognathus longimembris pacificus (Pacific pocket mouse): 125358507
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Entry
125358507 CDS
T08928
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125358507 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125358507 (Vps35)
Membrane trafficking [BR:
plop04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
125358507 (Vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
Imm5
FerA
Motif
Other DBs
NCBI-GeneID:
125358507
NCBI-ProteinID:
XP_048211644
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All DBs
Position
10:29164989..29199902
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AA seq
796 aa
AA seq
DB search
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYKNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPIEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSKVDDRWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSVYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESRESEGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcacctcaggatgagcaggaaaagctcctggatgaagccatt
caggctgtgaaagtacaatcctttcagatgaagagatgcctggacaaaaacaagcttatg
gatgctctgaaacacgcttctaacatgcttggtgaactccggacatccatgttatcacct
aagagctactacgaactctatatggctatttctgatgagctgcactacttggaggtctac
ctgacagatgaatttgctaaaggaagaaaagtagcagatctctatgagcttgtacagtat
gctggaaacataatcccaaggctctatctgttgattacagttggagttgtatatgtcagg
tcatttcctcagtccaggaaagatattttgaaagatttagtagaaatgtgccgtggtgta
caacatccattgaggggtttatttcttcgaaattatcttcttcaatgtaccagaaacatt
ttacctgatgaaggcgagccaacagatgaagagacaactggtgatattagtgactccatg
gattttgtactgctcaactttgcagaaatgaacaagctctgggtgcgaatgcaacatcaa
ggacatagccgagatagagaaaaaagagaacgagaaagacaagaactgagaattttagtg
ggaacaaatttggtgcgcctcagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttgacaggtatactggaacaagttgtaaattgtagggatgctttggctcaagaa
tatctcatggaatgtattattcaggtttttcctgatgaatttcatctccagacattgaat
ccttttcttcgggcctgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatc
gctttaattgacagattagctttgtttgcccatcgtgaagatggacctggaatcccagct
gatattaaactttttgacatattttcacaacaggtggctacagtgatacagtctaggcaa
gacatgccatcagaggatgtggtgtctttacaagtctctctaattaatcttgcgatgaaa
tgttacccagatcgtgtggactatgttgataaagttctagaaacaacagtggagatattc
aataagctcaaccttgaacatattgctaccagtagtgcagtttcaaaggagctcaccaga
cttttgaagatacctgttgatacttataaaaatatcttaacagtcttaaaattaaaacat
ttccacccactctttgagtattttgactatgagtccaggaagagcatgagttgttatgtg
ctgagtaatgttctggattataacacagaaattgtctctcaagaccaggtggactctata
atgaatttggtatccactttgatacaagatcagccagatcagcctatagaagaccctgat
ccagaagactttgctgatgagcagagccttgtgggtagattcattcatcttctgcggtct
gatgaccctgatcagcagtatttgattttaaacacagcacgaaagcattttggagctggt
gggaatcaacggattcgctttacactaccacccttggtatttgcggcttaccagctggct
tttcgatacaaagagaattctaaagtggatgacagatgggaaaagaagtgccagaagatc
ttttcatttgctcaccaaactatcagtgctttaattaaagcagagctggcagaattacct
ctaagactttttcttcagggagcgctagctgctggagaaattggttttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctgtgtatgaagatgaaatcagtgat
tcaaaggcacagctggctgccataactttgatcattggtacttttgagaggatgaagtgc
ttcagtgaggagaatcatgagcccttgaggactcagtgtgcgctcgctgcatccaaactt
ctgaaaaaacctgatcagggtcgagctgtgagcacttgtgcacatctcttctggtctggc
agaaacacagataaaaatggggaggagcttcatggaggcaagagggtaatggaatgccta
aagaaagctctaaaaatagcaaatcagtgcatggacccctctctacaagtgcagcttttt
atagaaattctgaatagatatatatatttttatgaaaaggaaaatgatgcggtgacaatt
caggttttgaaccagcttatccaaaaaattagagaagatcttccaaatctagagtccagt
gaagaaacggagcagattaacaaacatttccataacacactggaacatttgcgcttgagg
cgggaatcacgagagtctgaggggccaatctatgaaggtctcgtcctttaa
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