Perognathus longimembris pacificus (Pacific pocket mouse): 125358521
Help
Entry
125358521 CDS
T08928
Symbol
Apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125358521 (Apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125358521 (Apex1)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
125358521 (Apex1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
125358521 (Apex1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
125358521
NCBI-ProteinID:
XP_048211660
LinkDB
All DBs
Position
10:31421985..31424508
Genome browser
AA seq
318 aa
AA seq
DB search
MPKRGKKGAVAEDGVEPRTEPEAKKSKAGAKKNEKAAAGEGPVLYEDPPDQKTSPSGKAA
TLKICSWNVDGLRAWIKKKGLEWVKEEAPDILCLQETKCSENKLPAELQELSELSHQYWS
APSDKEGYSGVGLLSRQCPLKVSYGIGEEEHDQEGRVIVAEFDTFVLVTAYVPNAGRGLV
RLEYRQRWDEAFCKFLKGLASHKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGF
GELLQAVSLADSFRHLYPNTAYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKI
RSKALGSDHCPITLYLAL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgtggaaaaaagggagcggtagcggaagacggggtagagcccaggactgag
ccagaggctaagaagagtaaagcgggagcaaagaaaaacgaaaaagcagcagcaggcgag
gggccagtcttatatgaggaccctccagatcagaaaacctcacccagtggcaaggctgcc
acactcaagatctgctcctggaacgtggatgggcttcgcgcctggattaagaagaaaggt
ttagagtgggtgaaggaagaagctccagatatcctttgcctccaagagactaaatgttca
gagaacaaactaccagctgaacttcaagaactgtccgaactctcacatcagtactggtca
gctccttcagacaaggaaggatacagtggtgtgggtctgctttcccgccagtgcccactc
aaggtctcttatggcattggtgaggaggaacatgatcaagaaggccgagtgattgttgct
gaatttgacacatttgtacttgtgacagcctatgtacctaatgcaggccggggtctggta
agacttgaataccggcagcgttgggatgaagccttttgcaagtttctcaagggcttggct
tctcacaaacctcttgtgctatgtggggacctcaatgtggctcatgaagaaatagacctt
cgtaaccccaagggaaacaaaaagaatgctggttttactccacaagagcgccaaggcttt
ggggaattgctgcaggctgtgtccctggctgatagctttcggcacctgtatcccaacaca
gcttatgcttacactttctggacttacatgatgaatgctcgctccaagaatgttggttgg
cgccttgattactttttgttgtcccactctcttttacctgcattatgtgacagcaagatc
cgttccaaggcccttggtagtgaccactgtcccattactttgtacctagcgctctaa
DBGET
integrated database retrieval system
