Perognathus longimembris pacificus (Pacific pocket mouse): 125358539
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Entry
125358539 CDS
T08928
Symbol
Arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40 isoform X1
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125358539 (Arhgef40)
Membrane trafficking [BR:
plop04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
125358539 (Arhgef40)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
RHG20_PH
DUF5610
PH_10
Motif
Other DBs
NCBI-GeneID:
125358539
NCBI-ProteinID:
XP_048211682
LinkDB
All DBs
Position
10:32049303..32069808
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AA seq
1528 aa
AA seq
DB search
MPVPLSFFPPMFVGIEEPEPVEDCVQSTLAALYPPFEATAPTLLGQVFQVVERTYREDAL
RYTLDFLVPAKHLLAKVQQEACAQYSGFLFFHEGWPLCLHEQVVVQLAALPWQLLRPGDF
YLQVVPSAVQAPRLALKCLAPGGGRVQELPVPNEACAYLFTPEWLQGINKDRPTGRLSTC
LLSAPSGIQRLPWAELICPRFVHKEGLMVGHQPSTLPPELSSDPPELPSPPLSEEVLGTR
SPGDGHNAPAEGPEGEYVELLEVTLPARGISTDAEGSSGLSRTRTVPPRRNAGGKGRHRR
HRAWMHQKGLGPRDQDGTRPPGEGSSTRASPGSPQGSETVPEAIVLEGSEAPAENLEETS
ESCPLRLGEAGGGGLGTEGPPGTPRRTGKGNRRKKRAAGRGAVSQGGDNGPLSPGDKEET
RYQETLLNLPSPNEHKLPECGLVKEDEGLRKLESVPIEELTPADKKENRPPEDSEPTEDG
ALETEQEDMSLVHTAGSISPEEFLSEPPTQTLETGQEVKGESTPEEATISDDPDVAWDLM
ASGFFVLTGGVDHCGRALLTITPPCPPEESPASQDTLSSALHYLHSLLRPDLQVLGLSIL
LDLRRAPPLPPALISILNQLQDSGDPPLIQRLLILTQDALQTELCGFQGAELLSENELKR
VAKPEELQWDLGGHRDPSPSHWVEVHQEVARLCMLCQGVLSSVRQAIEELEGKAELEGEE
VVGMPEPLKKVLADPRLTALQRDGGAILMRLRSTHSSKVEGPGPATLYQEVDEAIHQLVR
LSNLHVQQQEQQQRRHRLQQVLQWLSGPGEEQLASFAVPGDSLSALQEKELQFRAFNTEV
QERLAQAREALDLEEDTTSQKVLDVFEQRLEQMESGLHRALRLQRFFQQAHEWVDESFAR
LAGAGPSRESVLAALALRRAPEPSAGTFQEMRSLALDLGSPAALREWGRCRARCQELEKR
IQQQLGEEASPQGHRRQRADSASSTGGQQGSHSPLPSLRSLLLTSSPGPRGAPSHCSLAP
CGEDYEDEDLELAPEADSRPARAVLIRGLEVTSTEVVDRTCSPREHVLLGRAGGPDGPWG
VGTPRIERKRSISAQQRLVSELIACEQDYVTTLSEPVLPPGPELTPELRGTWAAALSTRE
RLRSFHRTHFLRELQGCAAHPLRIGACFLRHGDQFSLYAQFVKHRHKLENGLAVLSPPTK
GSMESGPSLPRALQQPLEQLARYGRLLEELLREVGPELSSERQALRAAVQLLREQEARGR
DLLAVEAVRGCEIDLKEQGQLLHRDPFTVVCGRKKCLRHVFLFEHLLLFSKLKGSDGGLE
TFVYKQAFKTADMGLTENIGESGLCFELWFRRRRAREAYTLQATSPEIKLKWTSSIAQLL
WRQAAHNKELRVQQMVSMGIGNKPFLDIKALGERTLSALLTGRAARTRASVAVSSFEHAG
PSLPGFSPGACSLPARVEEEAWDLDVKQISLAPETLDSSGDVSPGPRSSPSLQGPHPGSS
TPTLASGGILGLSRQNHARALSDPTTPL
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atgccagtccccctgtccttcttcccacccatgtttgtgggtatagaggagcctgagccc
gtggaggactgtgtgcagagcacacttgctgccttgtacccaccctttgaagccacagcc
ccaaccctgctgggccaggtgttccaggtggtggagagaacttaccgggaggatgcattg
agatacacactggatttcctggtgccagccaagcacctgcttgccaaggtccagcaggaa
gcctgtgcccagtacagtggattcctcttcttccatgagggctggcccctctgcctgcat
gagcaggtggtggtacagctagcagccttgccctggcagctgctgcgcccaggagatttc
tacctgcaggtagtaccttcagcagtccaagcacctcggctggcactcaaatgcctggcc
ccagggggcggaagggtgcaggagttgcctgtgcccaatgaggcttgtgcctacttgttc
acacctgagtggctacaaggcatcaacaaggaccggccaacaggtcgcctcagcacttgt
ctactctctgcaccatctggaatccagcggctgccctgggctgagctcatctgtccacgg
tttgtacacaaagaaggcctcatggttgggcatcagccaagcacactgcccccagaactg
tcatctgaccccccagagcttcccagccctccactctctgaggaggtgctaggtacccgg
agtcctggggatgggcataatgctcctgcagaaggcccagagggtgagtatgtggagctg
ttggaggtgacgctgcctgcaagggggatctctacagatgctgagggctcttcaggtctc
tccaggacacggacagtaccccctcgcaggaatgctgggggaaagggccggcaccggcga
catcgggcatggatgcaccagaagggcctggggcctcgggaccaggatgggacacgacca
cctggtgaggggagcagcactcgagcctcccctgggtctccccaaggatctgagactgtg
ccagaggcaatagtcctggaaggatctgaggccccagcagagaacttggaagaaacatct
gaatcttgcccccttcggctaggggaggctggaggaggaggcctggggactgaaggacca
cctggtacccctcgaagaacagggaagggaaacaggagaaaaaagcgagctgcaggcaga
ggggctgttagccaaggaggagacaatggccctctcagccctggagacaaggaagagacc
agataccaggaaactcttctcaatctgccctcaccaaatgaacacaagcttccagaatgt
ggtctggttaaggaggatgaaggcttgaggaaattggaatctgtgccaatagaggaactc
acaccagcagataaaaaagaaaataggcccccagaagacagtgagcctacagaagatggt
gccttagagacagagcaagaggacatgagcctggtacatacggcaggatccataagtcca
gaggagttcctgtctgaacctccaacacagaccctggaaactgggcaggaagtaaaaggg
gagagcactccagaagaggccaccatctctgatgaccctgatgtagcttgggatttgatg
gcatctggattcttcgtcctgactggtggggtagaccactgtgggcgagctctactgacc
attacccctccgtgccctcctgaggagtccccagcctctcaagacactctgagctctgct
cttcattacctgcactcattgctcaggcctgatctgcaggtattggggctgtccattctg
ttggaccttcgcagggcacccccactccctcctgcactcatttccatcctgaatcaactt
caggactcaggagaccctccccttattcagcggctactaattctcacccaggatgccctt
cagactgaactctgtggatttcagggtgctgagttgctttcagagaatgaattgaaaaga
gtggccaagccagaggaattgcaatgggacctaggaggtcacagggacccctccccaagc
cactgggtagaggtacatcaggaagtggcgaggctatgtatgctgtgtcaaggtgtgctg
agttctgtacgacaggcaattgaggagctggagggaaaagcggagctagagggagaggag
gtagtgggaatgcctgagcccctgaagaaggtactagcagatcctcggctgacagcttta
cagagggatggaggagccatcctgatgagacttcgctccacccacagcagcaaggtggag
ggcccaggtccagccacattataccaggaagtggatgaagccatccaccagcttgtgcgc
ctctccaaccttcatgtgcagcaacaagagcaacagcaacgccggcaccgactccaacag
gtgctacaatggctctcaggcccaggggaggagcagctggctagctttgctgtgcctggt
gactccctgtctgccttgcaagagaaagagcttcaattccgggctttcaacactgaggtt
caggaacgcctggcccaggcccgggaggccttggatctggaggaggacactacttctcag
aaggttctagatgtctttgaacagcgcttggagcagatggaaagtggcctccatcgggcc
ctgaggcttcagcgcttcttccaacaggcacacgagtgggtggatgagagcttcgctaga
ctagcaggagctgggcccagtcgtgagtctgtactggcagccctagccttgcggcgggct
ccagagcccagtgctggaaccttccaggagatgcggtctctggctttggacctgggcagc
ccagcagccctgagagaatggggtcgttgccgagcccgctgccaagagctggaaaaaagg
attcaacaacagctgggagaagaggccagtcctcagggccaccggcgacaacgggcagac
agtgccagcagcacagggggccagcagggctcacacagccccttacccagcctcaggtcc
ctgctgctgactagcagccctgggccacgcggggccccatcccattgctccctggccccc
tgtggggaagactatgaagatgaggaccttgaactggccccagaagcagacagcagaccc
gcaagggctgtgctaatccgaggccttgaagtcaccagtactgaggtggtagacagaaca
tgttcacctcgggaacatgtactgctgggccgggctggggggccagatggtccttgggga
gtaggcacccctcggatagaacgcaaacgaagtatcagtgcccagcagcgcctggtgtct
gaactgattgcctgtgagcaagactatgtgaccactctgagtgagccggtgctacccccg
gggcctgagctgactccagaacttcggggcacctgggctgctgccctgagtacccgggag
agacttcgaagcttccaccgcactcacttcctgcgggagcttcagggctgtgccgcccac
cccctgcgcatcggggcctgcttccttcgacatggggaccagttcagcctctatgcccag
ttcgtgaagcaccgacacaaactcgaaaatggtctggctgtgctcagccccccaaccaag
ggctccatggaaagtggtcctagtttgccccgagctctgcagcagcccctagaacagctg
gctcgatatgggaggctcttggaggagctcctgcgtgaagttgggcctgagctgagttct
gagcgccaggccctcagggctgctgtgcagttgctccgggaacaagaggcccgaggaaga
gatctgctagctgtggaggcagtgcgaggctgtgagatagatctgaaggagcaagggcag
ctcttgcatcgggacccattcactgttgtttgtggccggaagaaatgccttcgtcacgtc
tttctttttgaacacctgctcctattcagcaaactcaaaggctctgatgggggtttggag
acctttgtttacaagcaggcttttaagactgctgacatggggctgacagaaaacattggg
gaaagtggactgtgttttgagctgtggtttcggcggcggcgtgcacgagaggcatacact
ctgcaagcaacctcaccagagatcaaactcaagtggacaagttctattgcccagctgcta
tggagacaggcagcccataacaaggagctccgagtgcagcagatggtctccatgggcatt
gggaataaacccttcctggacatcaaagctcttggggagcggacactgagcgccttgctt
actggaagagctgcccgcacccgggcctcagtggccgtgtcatcctttgagcatgctggc
ccctcccttccgggtttctcgccgggagcctgctccctgcctgctcgcgtcgaggaggag
gcctgggatctggacgtcaagcaaatttccctggccccagaaacactcgactcttctgga
gatgtgtccccaggaccaagaagcagtcccagcctgcaaggccctcaccctgggagcagc
accccgactctggccagtggaggaatcttagggctatctcgacagaatcatgcccgagcc
ctgagcgaccccaccactcctctctga
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integrated database retrieval system
