Perognathus longimembris pacificus (Pacific pocket mouse): 125358610
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Entry
125358610 CDS
T08928
Symbol
Nisch
Name
(RefSeq) nischarin isoform X1
KO
K24095
nischarin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125358610 (Nisch)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Phox homology (PX) domain-containing proteins
Other PX domain-containing proteins
125358610 (Nisch)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
LRR_4
LRR_8
LRR_9
LRR_NXF1-5
PH_PLEKHM2
LRR_14
BSP_II
Motif
Other DBs
NCBI-GeneID:
125358610
NCBI-ProteinID:
XP_048211835
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All DBs
Position
10:complement(37565184..37603478)
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AA seq
1523 aa
AA seq
DB search
MAAAARSFGPEREAEPAKEARVVGSELVDTYTVYIIQVTDGSHEWTVKHRYSDFHDLHEK
LVAERKIDKNLLPPKKIIGKNSRSLVEKREKDLEVYLQTLLAAFPGVAPRVLAQFLHFQF
YEINGITAALAEELFEKGEQLLGAGEVFAIRPLQLYAVTQQLLQGKPTCASGDAKTDLGH
ILDFTCRLKYLKVSGTEGPFGTSNIQEQLLPFDLSIFKSLHQVEISHCDAKHIQGLVTSK
PTLATMSIRFSATSMKEVLVPEASEFDEWEPEGTALEGPVTAVIPTWQALTALDLSHNSI
SEIDESVKLIPKIEFLDLSHNGVLVVDNLQHLYNLVHLDLSYNKLSSLEGVHTKLGNIKT
LNLAGNLLKSLSGLHKLYSLLNLDLSDNRIEQMEEVRSIGSLPCLEHVALLNNPLSIIPD
YRTKVLAQFGERASEVCLDNTATTEKELDTVEVLKAIQKAKDVKSKLSNPEKKVGEDSRL
PAAPCTRPSGSPPTTAPTSASLPQPILSNQGIMFVQEEALASSLSSTDSLTSEDRPIAQG
CSDSLESIPTAQAASDDLRDVPGAVGGASPEHAEPEVQVVPGSGQIIFLPFTCIGYTATN
QDFIQRLSTLIRQAIERQLPAWIEAANQREEGQGEEEEEEEEEEEEEDVAENRYFEMGPP
DTEEEEGGIQGEEEEEEEEEEDEEAEEERLALEWALGADEDFLLEHIRILKVLWCFLIHV
QGSIRQFAACLVLTDFGIAVFEIPHQESRGSSQHILSSLRFVFCFPHGDLTEFGFLMPEL
CLVLKVRHSENTLFIISDAANLHEFHADLRSCFAPQHMAMLCSPILYGSHTSLQEFLRQL
LTFYKVAGGCQERSQGCFPVYLVYSDKRMVQTAAGDYSGNIEWASCTLCSAVRRSCCAPS
EAVKSAAIPYWLLLTPQHLNVIKADFNPMPNRGTHNCRNRNSFKLSRVPLSTVLLDPTRS
CTQPRGAFADGHVLELLVGYRFVTAIFVLPHEKFHFLRIYNQLRASLQDLKTVVIAKTPA
TGARPQNPLVDGQPAEGRASNDECPQEAAADALAPAPAPTEVQTPGPAASAPGPAKTPAL
AEALAPAPPTMEAPAPASATEEAPVETTVEAPAEASVQAEALVQYPSEHLIQSTSEENQI
PSHLPVCPSLQHIASLQGSAIIELFHSSIAEVENEELRHLLWSSVVFYQTPGLEVTACVL
LSTKAVYFVLHDSLRRYFSEPLQDFWHQKNNDYNNSPFHISQCFVLKLSDLQSVNVGLFD
QHFRLTGSSPTQVVTCLTRDSYLTHCFLQHLMLVLSSLERTPSPEPVDKDFYSEFGNKST
GKMENYELIHSSRVKFTYPSEEEVGDLTYIVAQKMADPENAPTVSILLYVQAFQVGPPPP
GRCRSPLRPKTLLLTSAEIFLLDEDYVHYPLPEFAKEPPQRDRYRLDDGRRVRDLDRVLM
GYQPYPQALTLVFDDVQGHDLMGSVTLDHFGEVPGGLARGSQGREVQWQVFVPSAESREK
LISLLARQWETLCGRELPVELTG
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcggcgcgcagcttcgggcccgagcgggaggccgagccggccaaggaggct
cgcgtagtgggctcggagctcgtggacacgtacacggtttatatcatccaagtcacagat
ggcagccatgaatggacagtcaaacaccgctacagtgattttcatgacttgcatgaaaag
cttgttgcagagagaaaaattgacaaaaatctacttccacccaaaaaaattattggcaaa
aactcaagaagcttggtggagaagagggagaaggatctggaagtatatctccaaacactt
ctggctgccttccctggcgtggcccctagagtgctggcccagttcctgcattttcagttc
tatgagataaatggtatcactgcagcattggctgaagaactctttgaaaaaggagaacag
ctcttgggggctggtgaggtctttgccatcaggcccctgcaactgtatgcagttacccag
cagctgctacaagggaagcccacatgtgccagtggggatgccaagactgaccttgggcat
attctggatttcacctgtcgccttaagtaccttaaggtttctggcacagaagggcctttt
gggaccagcaacattcaggagcagctcctgccatttgatctgtcaatattcaagtctctt
caccaggtggagatcagtcactgtgatgccaagcacatccaagggctggttacctcaaaa
cccaccttagccacaatgagcatccgcttctcagcaacctccatgaaggaagtccttgtt
cctgaagcctcagaatttgatgagtgggagcctgaaggcacagccctggaaggccctgtg
actgctgtcatccccacatggcaagcactgactgctcttgacctgagccacaatagcatc
tctgagatcgacgagtctgtgaaactgatcccaaagattgagttcttggacctgagtcac
aacggtgtgctggttgtggataacctacagcacctgtataacctcgtgcacctggacctg
tcctacaacaagctctcctccttggaaggcgtccacaccaaactggggaacataaagacc
ttgaacctggcaggcaacctcctaaagagcctgagtggcctgcataagctctactccctc
cttaacttggacctcagtgacaacagaatcgagcagatggaggaagtcaggagcattgga
agcctcccgtgtctggagcacgtagccctgctgaacaatcctctcagcatcatccctgac
taccggaccaaggtgctcgctcagttcggagagcgggcctctgaggtgtgcctggataac
acagcaaccacagaaaaggagctggacactgtggaagtgctaaaagcaattcagaaagcc
aaggacgtcaagtccaaactgagcaacccagagaagaaggttggtgaggattctcggctc
ccagctgccccctgcaccagacccagtggctcccctcccaccacggctcccacctctgcc
tccctgccccagcctatcctctccaaccaaggaatcatgtttgtgcaggaggaggccttg
gccagcagcctctcatccacagacagcctgacgtctgaggaccggcccattgcccagggc
tgctctgactccttggagtccatccctacagcacaggcagcttctgatgacttaagggat
gtaccaggagctgttggtggtgcaagcccagaacacgcagagccagaggtgcaggtggtg
cctgggtctggccagatcatcttcctgcccttcacctgcattggctacacagccaccaac
caggacttcatccagcgcctgagcacactgatccgccaagccatcgagcggcaactgcct
gcctggattgaggctgccaaccagcgggaagagggccagggggaggaggaggaagaggag
gaggaggaggaagaggaggaagatgttgctgagaaccgctactttgagatgggaccccca
gacacagaggaagaggagggtggtatccagggggaggaagaagaagaggaggaagaagag
gaggatgaggaggctgaggaggagcgcctggcactggagtgggccctgggcgcggatgag
gatttcctgctggagcacatccgcatcctcaaggtgctgtggtgctttctgatccacgtg
cagggcagcatccgccagtttgctgcctgcctcgtgctcactgacttcggcattgctgtc
tttgagattcctcaccaggagtcacgaggcagcagccagcacatcctgtcctccctgcgc
ttcgtcttctgcttcccgcacggtgacctcaccgagtttggcttcctcatgccggaactg
tgtctggtgctcaaggtgcggcacagtgagaacacgctcttcatcatctccgatgctgcc
aaccttcacgagttccacgctgatctgcgctcctgcttcgccccccagcacatggccatg
ctgtgcagccctatcctctatggcagccacacgagcctgcaggagttcctgcgccagctg
ctcaccttctacaaggtggctggtggctgccaggagcgcagccagggctgctttcccgtc
tacctggtctacagtgacaagcgcatggtccagacggctgccggggactactcgggcaac
attgagtgggccagctgcaccttgtgctcggcagtgaggcgctcgtgctgtgcgccctct
gaggccgtcaagtctgccgccatcccctactggctgctgctcacaccccagcacctcaac
gtcatcaaggccgacttcaaccccatgcctaaccgtggcacccacaactgccgcaaccgc
aacagctttaagcttagccgtgtgcccctctctactgtgcttctggaccctacgcgtagc
tgcacccagcctcgaggtgccttcgctgacggccacgtgctcgagctgcttgtgggctac
cgctttgtcactgccatcttcgtgctgccccacgagaagttccatttcctgcggatctac
aaccagctacgggcctcactacaggacctgaagaccgtagtcattgccaagacccctgca
actggagccaggccccagaaccccctcgtggatggccagccagctgagggcagggccagc
aatgacgaatgtccccaggaggctgcagcagatgctctggctccagctcctgctcccaca
gaagtccaaacacccggcccagcagcctcagctccaggcccagcaaagacaccagctcta
gcagaggccttggctcctgctccacctacaatggaggccccggctccagcttcggccaca
gaagaggccccagtagagaccactgtggaggccccagcagaagcctcggtgcaagctgag
gcccttgtccaatacccaagtgagcacctgatccagtccacctcagaggagaatcagatc
ccctcgcacttgccagtctgcccatcgttgcagcacatcgccagcctgcaggggagtgcc
atcattgagctcttccacagcagcattgccgaggttgaaaacgaggagctgaggcacctc
ctgtggtcgtcagtggtgttctatcagaccccaggactggaggtgactgcctgcgtgctg
ctttccaccaaagctgtgtactttgtgctgcatgacagcctccgccgctacttctccgag
ccacttcaggatttctggcatcagaaaaataatgactacaacaacagtcccttccacatc
tctcagtgctttgtactcaaactcagtgacttgcagtcagtcaatgttggcctttttgac
cagcacttccggcttacaggctcctccccaacacaggtggtcacatgcttgactcgagac
agctacctgacgcactgcttcctacagcacctcatgcttgtgctctcctctctggagcgc
acaccctcacctgagcctgttgacaaagacttctactcagagtttggcaacaagagcaca
gggaagatggagaactatgagctgatccattcaagccgtgtcaagttcacctaccccagc
gaggaggaggtcggggacctgacgtacattgtggcacagaagatggctgacccagaaaac
gccccaaccgtcagcatcctactgtatgtacaggccttccaggtcggcccaccaccacct
gggcgctgcaggagtccactgcgccccaagaccctcctgctcaccagtgccgagattttt
ctcttagatgaggactatgtccattacccactgcccgagttcgccaaagagccaccacag
agagacaggtaccggctggatgatggccgccgcgtccgggacctggaccgtgtgctcatg
ggctatcagccctacccacaggcccttaccctcgtctttgatgacgtgcagggccatgat
ctcatgggcagtgtcaccctggaccactttggggaggtgccaggtggccttgccaggggc
agccagggccgtgaagtccagtggcaggtgtttgtccctagtgctgagagccgagaaaag
ctcatctcactgttggctcgccagtgggagaccctgtgtggccgggagctgcctgttgag
cttactggctag
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