Perognathus longimembris pacificus (Pacific pocket mouse): 125358625
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Entry
125358625 CDS
T08928
Symbol
Adamtsl1
Name
(RefSeq) ADAMTS-like protein 1 isoform X1
KO
K24429
ADAMTS-like protein 1/3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
plop04990
]
125358625 (Adamtsl1)
Domain-containing proteins not elsewhere classified [BR:
plop04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
125358625 (Adamtsl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
I-set
Ig_3
TSP_1
Ig_2
ig
ADAMTSL1
TSP1_CCN
V-set
ADAMTS_CR_3
TSP1_spondin
ADAMTS_spacer1
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
125358625
NCBI-ProteinID:
XP_048211900
LinkDB
All DBs
Position
1:118716457..119077504
Genome browser
AA seq
1765 aa
AA seq
DB search
MECCRRATPGTRLLVLAFLLLSSRTARSEEDPDGLWDAWGPWSECSRTCGGGASYSLRRC
LSSKSCEGRNIRYRTCSNVDCPPEAGDFRAQQCSAHNDVKHHGQFYEWLPVSNDPDNPCS
LKCQAKGTSLVVELAPKVLDGTRCYTESLDMCISGLCQIVGCDHQLGSTAKEDNCGVCNG
DGSTCRLVRGQYKSQLSATKLDDTVVAIPYGSRHSRLVLKGPDHLYLEIKTLQGVKSENS
LSSTGTFLVDNSSVDFQKFPDKEILRMAGPLTADFIVKIHDSGPADSTVQFIFYQPIIHR
WRETDFFPCSATCGGGYQLTSAECYDLRSNRVVADQYCHYYPENIKPKPKLQECNLDPCP
ASDGYKQIMPYDLYHPLPRWEATPWTACSSSCGGGIQSRAVSCVEEDIQGHVTSVEEWKC
MYTPKMPIVQPCNIFDCPKWLAQEWSPCTVTCGQGLRYRVVLCIDHRGLHTGGCSAKTKP
HIKEECIIPTPCYKPKEKLPVEAKLPWYKQAQELEEGAAVSEEPSFIPEAWSTCSVTCGV
GTQMRIVRCQVLLSFSQSVADLPVDECEGPKPASQRACYAGPCNGEIPEFNPDVTDRLLG
GLQDLEELYDWEYEGFTKCSESCGGGVQEAVVSCLNKQTRELADENLCVTSRRPPQLLKS
CNLDPCPARWEIGKWSPCSLTCGVGLQTRDVFCSHLLSKEMNEMVILADELCHHPKPNTV
QACNRFNCPPAWYPAQWQLCSRSCGGGVQKREVLCKQRMADGSFLELPETFCSASKPTSQ
QACKKDDCPSEWLLSEWTECSTSCGEGTQTRSAICRKLLKTGISTVVNSTLCPPLPFSSS
IRPCMLGTCARPGRPSTKHSPHIAAARNVYIQTRRQRKLHFVVGGFAYLLPKTAVVLRCP
TRRFRKPLITWEKDGQHLISSAHVTVAPFGYLKIHRLKPSDAGIYTCSAGPAREQFVIKL
IGGNRKLVARPLGLPSEEEAFLVRKSNPKEALHSHKHQNGILSNGSKAEKRGLAADAGSR
YDDLVSRLLEQGGWPGELLASWEVQDSMERNTSSEEDPSTEQVLLHLPFTMVTEQKRLDD
ILRNLSQQPEELRDVYSKHLVAQLAQEIFRSHLEHQDMLLKPSEQRFPPVAIPPHKHVSG
FTSSLRTSSAEAGGISRRPHRKPTILRKISAAQQLSASEVVTHLGQTVALASGTLSVLLH
CEAIGNPRPTITWARNGEEVQFGDRILLQPDDSLQILAPVEADVGFYTCNATNALGYDSV
SIAVTLAGKPLVKASRMTMVNTEKPAVTVDIGSTLKTVQGVNVTINCQVAGVPEAEVTWF
RNRSKLGSSHHLHEGSLLLTNVSLSDQGLYACRAANLHGELTESTQLLILDPPQVPTQLE
DIRALLSATGPNLPSVLTSPLGTQLVLDPGNSALLGCPVKGHPTPNITWFQDGQPIAMAI
GLTHRIMAAGQILQVANLSGGSRGEFNCLAQNEAGVLTQKATLVTQDYWWSVDRLATCSA
SCGNRGVQQPRLRCLLNHTEVDPEHCTGKPRPAVQPVACNRRDCPSRWMVTSWSACTRSC
GGGVQTRRVTCQKLKASGISTPVSNDLCSQLAKRPVDTQACNQQLCVEWTFSSWGQCNGP
CIGPRLAVQHRQVFCQTRDGIALPSEQCSTLPRPVSTQNCWSEACSVHWRVSLWTLCTAT
CGNYGFQSRRVECVHVRTNKAVPEHLCSWGPRPANWQRCNITPCENSTFQSQRTFCKFPT
GHRVQRAVPETEPQPGVLDQVPQGL
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atggaatgctgccgtcgggcaactcctggcacacggctcctggttctggctttcctactc
ctgagttccaggacagcacgctcagaggaagaccctgatggtctctgggatgcctggggt
ccatggagcgagtgttcccgcacctgcggtgggggggcctcctactcactgcgacgatgc
ctcagtagcaagagctgtgaaggacgaaatattcgatacagaacatgtagcaatgtggat
tgcccaccagaagcaggtgacttccgagcgcagcaatgctcagctcataatgacgtgaag
catcatggccagttttatgaatggcttcctgtttccaatgatcctgacaacccatgttca
ctcaagtgccaagccaaaggaacctccctggttgttgagctagcaccgaaggttttagat
ggtacacgatgctacacagaatcgttggatatgtgcatcagtggtttatgccaaattgtt
ggctgcgaccatcagctgggaagcacggccaaggaggacaactgtggtgtgtgcaacgga
gatggctctacctgtcgactggttcgagggcagtataaatcccagctctctgcaactaaa
ttggatgatacagtggttgccattccctatggaagtcgacacagtcgccttgtcttaaaa
ggaccagatcatttgtatctggaaatcaaaaccctccaaggtgttaaaagtgaaaacagt
ctcagttctacaggcacctttcttgtggacaattctagtgtggacttccagaaatttcca
gacaaagagatactgagaatggctggaccactgacagcagatttcattgtcaagatccat
gactcagggcctgcagatagcacagtccagttcatcttctaccaaccgatcatccatcga
tggagagagacagatttcttcccttgctcagcaacctgtggaggaggttaccagctgaca
tcggctgagtgttatgatctccggagcaaccgtgtggttgctgatcagtactgtcactat
tacccagagaatatcaagcccaaacccaagcttcaggagtgcaacttggatccttgtcca
gccagtgacggatacaagcagatcatgccttatgacctctaccatccccttcctcggtgg
gaggccaccccatggaccgcgtgctcctcctcatgtggggggggcatccagagccgtgca
gtttcctgtgtggaggaggacatccaggggcatgtcacatcagtggaagagtggaaatgc
atgtacacccctaagatgcccatcgtgcagccctgcaacatttttgactgccctaaatgg
ctggcacaggagtggtctccgtgcacggtgacatgtggccagggcctcaggtaccgtgtg
gtcctctgcattgaccaccgaggactgcacacaggaggctgcagtgcaaagacaaagccc
cacataaaagaggaatgcatcatacctacgccctgctacaagcccaaagagaaacttcct
gttgaggccaagctgccatggtacaagcaagctcaagagctggaagaaggagcagccgtg
tcagaagagccctcgttcatcccagaggcttggtccacctgctcagtcacttgtggtgtg
gggactcaaatgcgaatagtcaggtgccaggtgctcctgtctttctctcagtcggtggcg
gacctgcctgttgatgagtgtgaaggacccaagcctgcatcccaacgtgcttgttacgca
ggaccatgcaacggggagattcctgagtttaatccagatgtcacagacaggctcttgggt
ggcctgcaggatcttgaagagctgtatgactgggagtatgaaggattcaccaagtgctct
gagtcctgtggaggaggtgtccaggaggctgtggtgagctgcctgaacaaacagacccgg
gagcttgctgatgagaacctgtgcgtgaccagccgccggcccccacagctcctgaaatct
tgcaatttggacccctgcccagcaaggtgggaaattggcaagtggagtccatgtagtctt
acgtgtggggttggccttcagacccgagatgtcttctgctcccacttactttccaaagaa
atgaatgaaatggtaatcctggctgatgagctgtgtcaccaccccaagcccaacacagtc
caagcttgcaaccgtttcaattgccccccagcctggtatcctgcacaatggcagctgtgc
tccaggagctgtggcggaggtgttcagaaacgtgaggttctttgcaagcaacgcatggct
gatggaagtttcctggaactccctgagaccttctgttctgcttccaaaccaacatctcag
caagcatgcaagaaagatgactgccccagtgaatggcttctctcagagtggaccgagtgt
tccaccagctgtggggagggcactcagactcgaagtgccatttgccggaagttgctgaaa
actgggatctccaccgtggtcaactccaccctgtgcccgcccctgcctttctcttcttcc
atccggccatgcatgctgggaacctgtgcccggcccgggcggccatccacaaagcacagc
cctcacatcgcagccgccaggaacgtctacatccagacccgcaggcagaggaagctgcac
ttcgtggtgggaggattcgcctacttgctccccaagacggccgtggtactgcggtgcccc
acgcgcaggttccgcaagcccctcatcacctgggagaaagatggccagcacctcatcagc
tcggcgcatgtcaccgtggccccttttggctacctgaagatccatcgcctgaaaccctcc
gatgcaggcatctacacctgctctgcgggacctgcccgggagcagtttgtgattaaactt
atcggaggcaaccgcaagctggtggcccgacccctgggcctaccgagcgaagaggaggct
ttcctggtgagaaagtccaaccccaaagaggccttgcactcccacaaacaccaaaacggg
atcctctccaatggcagcaaggctgagaagcggggtcttgctgcagacgccgggagccgc
tatgatgaccttgtctcccggctgctggaacagggaggctggccgggagagctcttggcc
tcctgggaggtgcaggactcgatggaaaggaacacatcctccgaggaagatcccagcact
gagcaggtcctcctacatctccccttcaccatggtgaccgagcagaagcgcctggatgac
atcctcaggaacctttcccagcagcccgaggagctccgagatgtctacagcaaacatctg
gtggcccagctagcccaggagatcttccgcagccacctcgagcaccaggacatgctcctc
aaaccctcggaacagaggtttcctcctgtggccattcctcctcataaacacgtgtctggc
ttcaccagctccctgaggacctcctctgccgaggctgggggcatctctcgaaggccacac
cgcaagcccaccatcttgcgaaagatctccgctgcccaacagctctcagcctctgaggtg
gtcacccacctggggcagaccgtagctctggccagcgggacactgagtgtgctgctacac
tgcgaggccataggaaacccaaggcctaccatcacctgggccaggaatggagaagaagtt
cagtttggtgacaggattctcctgcaacctgatgactccttacaaatcttggcaccagtg
gaagctgatgtgggtttctatacatgcaatgccacaaatgccttgggatatgactcagtt
tccattgccgtcacattagcaggaaagccactggtgaaagcatcacggatgacgatggtc
aacacagagaagcccgcggtcacagtggatataggaagcactctcaaaacagtgcagggg
gtgaacgtgacaattaactgccaagttgcaggtgtgcctgaagctgaagtgacttggttc
aggaatagaagcaaactgggctcctctcaccatctgcatgagggctccttgctgctcaca
aatgtatccctctcagatcaaggcctgtatgcctgtagggcagccaatcttcatggcgag
ctaaccgagagcacccagctcctaattctagatcccccccaggtccctacacagttggaa
gacatcagagccttactctcagccactggaccgaaccttccttcagtgctgacgtctcct
ctgggaacacagctggtcctggatcctgggaattctgctctccttggctgccctgtcaaa
ggtcaccccacccccaatatcacctggtttcaggacggccagccaatcgctatggccata
gggctgacgcatcgtatcatggcagctgggcagatacttcaggttgcaaatctcagtgga
ggatctcgaggggaattcaactgccttgctcagaatgaggcaggggtgctcacgcaaaag
gcaaccctagtgacccaagattactggtggtctgtggacagactggcaacctgctctgca
tcttgtggtaaccgaggggttcagcagccccgcctgaggtgtctgctgaaccacaccgag
gttgaccctgagcactgtacaggaaagccacgccctgctgtccaacctgttgcctgcaac
cgtagagactgcccttctcggtggatggtgacttcctggtctgcctgtacccggagttgt
ggtggaggtgtccagactcgccgggtgacctgtcagaagctgaaagcctctgggatctcc
acccctgtgtccaatgacttgtgctcccagcttgccaaacgaccagtggatacacaggcc
tgtaaccagcagctgtgtgtggagtggaccttctccagctggggccagtgcaatgggcct
tgcatcgggcctcgcctcgccgtgcaacacagacaagtcttctgccagacccgggatggc
atcgccttaccatcagaacaatgcagcacccttcccaggcctgtgagcacccagaactgc
tggtcagaggcctgcagcgtacactggagagtcagtctgtggaccctgtgcacagcgacc
tgtggcaactatggcttccagtcccggcgggtagagtgtgtgcatgtccgcaccaacaag
gccgtgcctgagcacctgtgctcctgggggccccgccctgccaactggcagcgctgcaac
atcaccccatgtgaaaacagtacgttccaatcccaaagaacattctgcaaattccccacg
gggcatcgggtgcagagggcagtccctgaaactgaacctcaacccggggtattggatcag
gttccccaaggattgtga
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