Perognathus longimembris pacificus (Pacific pocket mouse): 125358708
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Entry
125358708 CDS
T08928
Symbol
Thoc7
Name
(RefSeq) THO complex subunit 7 homolog isoform X1
KO
K13176
THO complex subunit 7
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013
Nucleocytoplasmic transport
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125358708 (Thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
125358708 (Thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plop03019
]
125358708 (Thoc7)
03041 Spliceosome [BR:
plop03041
]
125358708 (Thoc7)
Messenger RNA biogenesis [BR:
plop03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
125358708 (Thoc7)
Spliceosome [BR:
plop03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
125358708 (Thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
Zw10_N
UPF0193
OVT1
Peptidase_S10
Motif
Other DBs
NCBI-GeneID:
125358708
NCBI-ProteinID:
XP_048212040
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All DBs
Position
10:complement(53256899..53276082)
Genome browser
AA seq
203 aa
AA seq
DB search
MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQC
EFSMGKTLLVYDMNLREMENYEKIYKEIDRSIAGAHEKIAECKKQILQAKRIRKNRQEYD
ALAKVIQHHPDRHETLKELEILGKELEHLSHIKETVEDKLELRRKQFYVLLSTIHELQQT
LENDEKFCEIEAPEAGIKTAPKP
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggagccgtgacggacgatgaagtcataaggaagcgactcttaattgatggagatggt
gctggtgatgatcggaggattaatttgctagtgaaaagtttcattaaatggtgcaactct
ggatcccaagaagagggatatagccagtaccaacggatgcttagcaccctgtctcaatgt
gaattttcaatgggcaaaactctgctggtatatgatatgaatctcagagaaatggaaaat
tatgaaaaaatttacaaagaaatagatagaagcattgctggagcccatgaaaaaattgct
gagtgtaaaaagcagattcttcaagcaaaacgaataagaaaaaatcgccaagaatatgat
gctttggcaaaagtgattcaacatcatccagatagacatgagacattaaaggagctagag
attctggggaaagaattagaacatctctcacatattaaagaaactgttgaagataagcta
gaattgaggcggaagcagttttatgttcttcttagcactattcatgaacttcagcaaaca
ctggaaaatgatgaaaagttctgcgagatagaagctccagaagcaggcatcaaaacagct
cctaagccctag
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