Perognathus longimembris pacificus (Pacific pocket mouse): 125358767
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Entry
125358767 CDS
T08928
Symbol
Bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125358767 (Bhlhe40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125358767 (Bhlhe40)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
125358767 (Bhlhe40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
125358767
NCBI-ProteinID:
XP_048212151
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Position
10:65339315..65367691
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AA seq
412 aa
AA seq
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MERIPSAQPPPACLPKTPVLEPGDLPGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGELSGRSVEAGQEMFCSGFQTCAREVLQYLAKHENARDVKSSQLVAHLHRVVS
ELLQGGPARKPSDSASKAVDLKEKPGSLVRGSEGPGKNCVPVIQRTFAASSGEQSGSDTD
TDSGYGGESEKGDPRGEQPYFKGEHGRRFALGDRVSTIKQESEEPPSKKSRMQLPDDEGP
FPGGDLISSPFLAPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYPGLNASAA
ALTTFMNPDKISAPLLMPQRLPSPLTAHPALDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcagccaccccctgcctgcctgcccaaaacgccggtgctg
gagcccggagacctgcccgggatggacttcgcccacatgtaccaagtgtacaaatcgcgg
cggggcatcaagcggagcgaggacagcaaggagacctacaaactgccacaccggctcatc
gagaaaaagagacgtgaccggattaacgagtgcatcgcccagctgaaggacctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttctggaacttacc
ttgaagcacgtgaaagcgctaacaaatctaattgatcagcagcagcagaaaatcattgcc
ctgcagagcggtttacaagctggtgagctgtctgggagaagcgtggaagcaggccaagag
atgttctgctcgggtttccagacctgtgcccgggaggtacttcagtacctggccaagcac
gagaacgcgcgggacgtgaagtcctcgcagctggtggcgcacctgcaccgcgtggtctcc
gagctgctgcaggggggcccggccaggaaaccctcggactcggcctccaaagccgtggac
ttgaaggagaagcccggctccctggtccgaggctccgaaggccccgggaagaactgcgtg
ccggtcatccagcggactttcgccgcctcgagcggggagcagagtggcagcgacacggac
acagacagcggctacgggggggagtcggagaaaggcgacccgcgtggggagcagccctac
ttcaaaggcgagcacgggcgcaggttcgccctgggagaccgggtcagcaccattaagcag
gagtccgaagagcccccctccaagaagagccgcatgcagctcccggacgacgagggccct
ttccccggcggcgacctcatcagctcccctttcctggctcctcacccacaccagcctccc
ttctgcctgcccttctatctgatccccccctccgccacggcctatctgcccatgctggag
aaatgctggtaccccacctccgtgcccgtcctctacccgggcctcaacgcctcggcggcc
gccctcaccaccttcatgaacccggacaagatctccgcccctctgctcatgcctcagaga
ctcccttcccccctgacagcccacccggccctcgactcctccgccctgctccaggctctg
aaacagatcccccctttaaacttagaaaccaaagactaa
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