KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125358793
Entry
125358793         CDS       T08928                                 
Symbol
Sec13
Name
(RefSeq) protein SEC13 homolog
  KO
K14004  protein transport protein SEC13
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03013  Nucleocytoplasmic transport
plop04141  Protein processing in endoplasmic reticulum
plop04150  mTOR signaling pathway
plop05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    125358793 (Sec13)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125358793 (Sec13)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    125358793 (Sec13)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    125358793 (Sec13)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plop03019]
    125358793 (Sec13)
   04131 Membrane trafficking [BR:plop04131]
    125358793 (Sec13)
Messenger RNA biogenesis [BR:plop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     125358793 (Sec13)
Membrane trafficking [BR:plop04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    125358793 (Sec13)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    125358793 (Sec13)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    125358793 (Sec13)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 NBCH_WD40
Other DBs
NCBI-GeneID: 125358793
NCBI-ProteinID: XP_048212218
LinkDB
Position
10:complement(68287283..68297986)
AA seq 324 aa
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPV
WQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHAGHDSSVNSVCWAPHDYGLIL
ACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLLDQPSGQKPSFIK
KFASGGCDNLIKLWREEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRV
FIWTCDDASGSMWSPKLLHKFSDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCI
SDVNKGQGSGSASASAADGQQNEQ
NT seq 975 nt   +upstreamnt  +downstreamnt
atggtgtcggtaattaacactgtggacacgtcccacgaggacatgattcacgacgcccag
atggactactacggcacccgcctggccacctgctcctccgacaggtctgtcaagatcttc
gacgtgcgcaacggagggcagatcctcatcgccgacctccggggccacgagggccccgtg
tggcaggtggcctgggcccaccccatgtacggcaacatcctggcgtcctgctcctacgac
cgcaaagtcatcatctggaaagaggaaaacggcacgtgggagaagacccacgaacacgcg
ggacacgactcctcagtgaactctgtgtgctgggccccccacgactatgggctgatcctg
gcctgcgggagctcggacggggccatctccctgctcacctacacgggggaaggccagtgg
gaagtgaagaagatcaacaacgcccacaccatcggctgcaacgccgtcagctgggcccct
gccgtggtccccggcagcctcctggaccagccctcgggccagaagcccagtttcatcaag
aagtttgcctcgggcggctgcgacaacctcatcaagctgtggagggaagaggaggacggc
cagtggaaggaggagcagaagctggaggcccacagtgactgggttcgagacgtggcctgg
gccccctccatcggcctgcccaccagcaccatcgccagctgctcccaggacggccgcgtg
ttcatctggacctgcgacgacgcgtcgggcagcatgtggtcgccgaagctgctgcacaag
ttcagcgacgtggtgtggcacgtgagctggtccatcaccgccaacatcctggccgtctcg
ggcggcgacaacaaggtgacgctgtggaaggagtcggtggacggacagtgggtttgcatc
agtgacgtcaacaagggccaggggtccgggtccgcgtcggcgtcggccgcagacggccag
cagaacgagcagtga

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