Perognathus longimembris pacificus (Pacific pocket mouse): 125358817
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Entry
125358817 CDS
T08928
Symbol
Pparg
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome proliferator-activated receptor gamma
KO
K08530
peroxisome proliferator-activated receptor gamma
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03320
PPAR signaling pathway
plop04148
Efferocytosis
plop04152
AMPK signaling pathway
plop04211
Longevity regulating pathway
plop04380
Osteoclast differentiation
plop04714
Thermogenesis
plop04932
Non-alcoholic fatty liver disease
plop05016
Huntington disease
plop05200
Pathways in cancer
plop05202
Transcriptional misregulation in cancer
plop05216
Thyroid cancer
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
125358817 (Pparg)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
125358817 (Pparg)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
125358817 (Pparg)
09158 Development and regeneration
04380 Osteoclast differentiation
125358817 (Pparg)
09149 Aging
04211 Longevity regulating pathway
125358817 (Pparg)
09159 Environmental adaptation
04714 Thermogenesis
125358817 (Pparg)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125358817 (Pparg)
05202 Transcriptional misregulation in cancer
125358817 (Pparg)
09162 Cancer: specific types
05216 Thyroid cancer
125358817 (Pparg)
09164 Neurodegenerative disease
05016 Huntington disease
125358817 (Pparg)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125358817 (Pparg)
09167 Endocrine and metabolic disease
04932 Non-alcoholic fatty liver disease
125358817 (Pparg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plop03000
]
125358817 (Pparg)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
plop03310
]
125358817 (Pparg)
Transcription factors [BR:
plop03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
125358817 (Pparg)
Nuclear receptors [BR:
plop03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
125358817 (Pparg)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPARgamma_N
zf-C4
Hormone_recep
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
125358817
NCBI-ProteinID:
XP_048212247
LinkDB
All DBs
Position
10:69297400..69343712
Genome browser
AA seq
521 aa
AA seq
DB search
MGETPGDSPVDPEGHCFADTLPVAATQEAAMVDTEMPFWPTSFGLGSVDLAVMDEHPHAF
DIKPFTTVDFSSISNPHYEDIPFARAEPILNTADYKYDLKLQEYQSMRFMSSLQPAEAGG
AIKVEPASPPYYSEKTQLYNRPHEEPSSSLMAIECRVCGDKASGFHYGVHACEGCKGFFR
RTIRLKLIYDRCDLNCRIHKKSRNKCQYCRFQKCLAVGMSHNAIRFGRMPQAEKEKLLAE
ISSDMDQLNPESADLRPXGQALYDSYIKSFPLTKAKARAILTGKTTDKSPYVIYDMNSLM
MGEDKIKFKLITPLQEPSKEVAIRIFQGSQFRSVEAVQEITEYAKSIPGFVTLDLNDQVT
LLKYGVHEIIYTMLASLMNKDGVLISEGQGFMTREFLKSLRKPFGDFMEPKFEFAVKFNA
LELDDSDLAIFIAVIILSGDRPGLLNVKPIEDLQDSLLQALELQLKLNHPESSQLFAKLL
QKMTDLRQIVTEHVQLLHVIKKTETDMSLHPLLQEIYKDLY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagacgccgggagattctcctgtggacccggagggccactgcttcgccgacacc
ctgcctgtcgccgccacgcaagaagccgccatggtcgacacggagatgcccttctggccc
accagtttcggcctgggctcggtggacctggcggtgatggacgagcacccccacgccttc
gacatcaagcccttcaccaccgtggacttctccagcatctccaacccgcactacgaagac
atcccgttcgccagggccgagccgatcctcaatacggcggattacaaatacgacctgaag
ctgcaagaataccaaagtatgcggttcatgtcctcccttcagcccgctgaggccggaggt
gccatcaaggtggagccggcctccccgccttactactcggagaagacgcagctctacaac
cggccccacgaggagccctccagctccctcatggccatcgagtgccgcgtgtgcggggac
aaagcgtccggcttccactacggggtccacgcctgcgagggctgcaagggcttcttccga
aggactatccgattgaagcttatttatgacaggtgtgatctcaactgtcggatccacaaa
aaaagcagaaataaatgtcagtactgtcggttccagaagtgccttgctgtggggatgtca
cacaacgccatcaggttcgggcggatgccgcaggcggagaaggagaagctgttggcggag
atctccagcgacatggaccagctgaacccggagtcggccgacctccggcccnntggccaa
gcactgtacgactcctacatcaagtccttcccgctgaccaaggccaaggcgagggccatc
ctgaccggcaagaccacggacaaatcaccctacgtcatctacgacatgaactccctcatg
atgggggaagacaagatcaagttcaagctcatcacccccctgcaggagcccagcaaggag
gtggccatccgcatcttccagggctcgcagttccgctccgtggaggccgtgcaggaaatc
accgagtacgccaagagcatccccggcttcgtgaccctggacctgaacgaccaagtgact
ctgctcaaatacggcgtccacgagatcatctacaccatgctggcctcgctgatgaataag
gacggcgtgctcatctccgagggccagggcttcatgaccagggagttcctcaagagcctg
cgcaagcccttcggtgactttatggagcccaagttcgagttcgcggtgaagttcaatgca
ctggaattagacgacagcgacttggccatcttcatcgccgtcatcatcctcagcggagac
cgcccgggcctgctgaacgtgaagcccatcgaggacctccaggacagcctcctgcaggcc
ctggagctgcagctcaagctgaaccaccccgagtcctcgcagctcttcgccaagctgctg
cagaagatgacggacctcaggcagatcgtcacggagcacgtgcagctgctgcacgtgatc
aagaagaccgagaccgacatgagcctccacccgctgctgcaggaaatctacaaggacctg
tactag
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