Perognathus longimembris pacificus (Pacific pocket mouse): 125359004
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Entry
125359004 CDS
T08928
Symbol
Vps45
Name
(RefSeq) vacuolar protein sorting-associated protein 45
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
125359004 (Vps45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359004 (Vps45)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
125359004 (Vps45)
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Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF5617
Motif
Other DBs
NCBI-GeneID:
125359004
NCBI-ProteinID:
XP_048212390
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Position
11:complement(44328578..44381247)
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AA seq
570 aa
AA seq
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MNVVFAVKQYISKMIEDSGPGMKVLLMDKETTGIVSMVYTQSEILQKEVYLFERIDSQNR
EIMKHLKAICFLRPTKENVEYLIQELRRPKYSIYFIYFSNVISKSDVKSLAEADEQEVVA
EVQEFYGDYIAVNPHLFSLNILGCCQGRNWDPAQLSRTTQGLTALLLSLKKCPMIRYQLS
SEAAKRLAECVKQVITKEYELFEFRRTEVPPLLLILDRCDDAITPLLNQWTYQAMVHELL
GINNNRIDLSRVPGISKDLREVVLSAENDEFYANNMYLNFAEIGSNIKNLMEDFQKRKPK
EQQKLESIADMKAFVENYPQFKKMSGTVSKHVTVVGELSRLVSERNLLEVSEVEQELACQ
NDHSSALQNVKRLLQNPKVTEFDAARLVMLYALHYERHSSNSLPGLIMDLRNKGVSEKYR
KLVSAVVEYGGKRVRGSDLFSPKDAVAITKQFLKGLKGVENVYTQHQPFLHETLDHLIKG
KLKENLYPYLGPSTLRDRPQDIIVFIIGGATYEEALTVYNLNRTTPGVRIVLGGTTVHNT
KSFLEEVVASGLHSRGRESSQVTSRSASRR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtttttgcggtgaaacagtacatttccaaaatgatcgaggacagcgggccc
ggaatgaaagtactgctcatggataaagagacgaccggcatcgtgagtatggtatataca
caatcagagattcttcagaaggaagtatacctctttgaacgcattgattctcaaaatcga
gagatcatgaaacacctgaaggcaatttgttttcttcgacctacaaaggagaatgtggaa
tatctgattcaggagctccgaagacccaaatacagtatatattttatttatttcagtaat
gtgatcagcaagagtgatgtgaagtcattagctgaagctgatgaacaggaagttgtggct
gaggttcaggaattttatggtgattacattgctgtgaacccacatttgttttccctcaat
attttgggttgctgtcagggtcgaaactgggatccagcccagctatccagaacaactcaa
ggactgacagctctccttttatctctgaagaaatgtcccatgattcgttatcagctctca
tcagaggcagcaaagagacttgccgaatgtgttaagcaagtgattactaaagaatatgaa
ctgtttgaattccggcggacagaggtgcctccactactgcttattttagatcgctgtgat
gatgccatcactccattgctcaaccagtggacataccaggccatggttcatgaactacta
ggcataaacaacaatcggattgatctttccagagtgccggggatcagtaaagacttaaga
gaggtggtcctttctgctgaaaatgatgaattttatgctaataatatgtacctaaatttt
gcagagattggtagcaatataaagaatcttatggaagacttccagaagaggaaaccaaaa
gaacaacaaaaactagaatcaatagcagacatgaaggcctttgttgaaaattatccacag
tttaagaagatgtccgggactgtatcaaagcatgtgacagtagttggagaactgtctcgg
ttggtcagtgagcggaatctgctggaagtttcagaggttgagcaagaattggcctgtcaa
aatgaccattctagtgctctccagaatgtaaagagacttctgcagaaccccaaagtgaca
gagtttgatgctgctcgtctggtgatgctttatgctctacattatgagcgacacagcagc
aacagcctgccaggactaataatggatctcaggaataaaggtgtttctgagaagtatcga
aagcttgtatctgcagttgttgaatatggtggtaaacgagttagaggaagtgacctcttc
agccccaaagatgctgtagctattaccaaacagttcctcaaaggactgaagggagtagaa
aatgtgtatacacagcatcagcccttcctgcatgagaccttggaccatctcatcaaagga
aaacttaaagaaaacctctatccttacctaggccccagcacactcagagacagacctcag
gatatcattgtgtttataattggaggagccacctatgaagaggcactaacagtttataac
ctgaaccggaccacacctggagtgaggattgtcctgggaggaacaacagtgcacaacaca
aaaagtttcctagaggaagttgtggcttctggactgcacagccgaggcagggagagctct
caagtcacctcgaggtcagcaagcagaagatga
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