Perognathus longimembris pacificus (Pacific pocket mouse): 125359033
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Entry
125359033 CDS
T08928
Symbol
Cry1
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K02295
cryptochrome
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
125359033 (Cry1)
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
125359033
NCBI-ProteinID:
XP_048212448
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Position
1:11511310..11554853
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AA seq
587 aa
AA seq
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MGVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLE
DLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEA
GVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLISKMEPLEIPVETITSEVIEKCTT
PLSDDHDEKYGVPSLEELGFDTDGLPSAVWPGGETEALTRLERHLERKAWVANFERPRMN
ANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAA
TNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHA
VACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGR
RTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLN
IERMKQIYQQLSRYRGLGLLASVPSNPNGNGGLMGYAAGDNLPGSSSSGSCSQGSGILHY
AHGDSQQMHLLKQGRSSMGTGLSSGKRPSQEEDAQGIGPKVQRQSTN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggggtgaacgcggtgcactggtttcgaaaggggctccggctccacgacaaccccgcc
ctaaaggagtgcatccagggcgccgacaccatccgctgcgtgtacatcctcgacccctgg
ttcgccggatcctccaacgtgggcatcaacaggtggcgatttttgcttcagtgtcttgag
gatcttgacgccaatctacgaaaattaaattctcgtctatttgtgattcgtggacaacca
gctgatgtgtttcccagacttttcaaggaatggaacattaccaaactttcgattgagtat
gattctgagccttttggaaaggaacgagatgcagcaattaagaagctggctacggaagct
ggggtagaagtcattgtgaggatttcacacacattatatgacctagacaagatcatagaa
ctcaatggtggacaaccacctctaacttataaaagatttcagactctcatcagcaaaatg
gagccactagagataccagtagagacaattacttcagaagtgatagaaaagtgtacaact
cctctgtcagatgaccatgatgagaaatatggagtcccttccctggaggagctaggtttt
gatacagatggcttaccctctgcagtctggccagggggagaaactgaagcacttacacgt
ttggagaggcatttggaaagaaaggcttgggtggcgaactttgaaagacctcgaatgaat
gcaaattccctgcttgcaagcccgactggactcagtccttatcttcgatttggttgtttg
tcatgtcggttattttacttcaaattgactgatctctacaaaaaggtaaagaagaacagt
tccccacccctttctctttatgggcaactattatggcgtgaatttttctatacagcagca
acaaataatccccggtttgacaaaatggaagggaatcccatctgtgttcagattccttgg
gataagaatcccgaggctttggccaaatgggcagaaggccggacgggtttcccatggatt
gacgccatcatgacacagcttcgtcaggagggctggattcaccatttagccagacacgca
gtggcctgcttcctgacacgaggcgacctgtggattagctgggaggaaggaatgaaggta
tttgaagaattactccttgatgcagattggagcataaatgctggaagctggatgtggctg
tcttgtagttcctttttccaacagttttttcattgctattgccctgttggttttggtagg
agaacagatcccaatggagactatatcagacgttatttacctgtcttaagaggcttccct
gcgaaatacatctatgatccctggaatgcaccagaaggtatccaaaaagtagccaaatgt
ttgattggagttaattatccgaaaccaatggtgaaccacgctgaggcgagccgtttgaat
attgaaaggatgaaacagatctatcagcagctgtcccgataccgtggactagggcttctt
gcatcagtgccttctaacccaaacgggaatggaggactcatggggtatgcagctggagac
aatctcccaggttccagcagcagtggaagttgctctcaagggagtggtattttacattat
gctcatggagacagtcagcaaatgcacctgctaaagcaaggaagaagctcgatgggcact
ggtcttagcagtgggaaacgccccagtcaggaagaggacgcgcagggtatcggccccaaa
gtccagagacagagcaccaactaa
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