Perognathus longimembris pacificus (Pacific pocket mouse): 125359041
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Entry
125359041 CDS
T08928
Symbol
Prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125359041 (Prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
plop03041
]
125359041 (Prpf3)
Spliceosome [BR:
plop03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125359041 (Prpf3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
Motif
Other DBs
NCBI-GeneID:
125359041
NCBI-ProteinID:
XP_048212455
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Position
11:complement(44130843..44160976)
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AA seq
683 aa
AA seq
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MALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTL
RFVDKLFEAVEEGRSSRHSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVE
EEPEVIPGPPSESPGMLTKLQIKQMMEAATRQIEERKKQLSFISPPTPQPKTTSSSQPER
LPIGNTIQPSQAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGI
APPKVELKDQTKPTPLILDEQGRTVDATGKEIELTHRMPTLKANIRAVKREQFKQQLKEK
PSEDMESNTFFDPRVSIAPSQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEISQAAR
KTGIHTSTRLALIAPKKELKEGDIPEIEWWDSYIIPNGFDLTEENPKREDYFGITNLVEH
PAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVRISN
LMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKKIKKLKEDISQG
VHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKAQKKFKRLMLH
RIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKFKQCPTENMAREH
FKKHGAEHYWDLALSESVLESTD
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggcactgtctaagagggagctggatgagctgaaaccatggatagaaaagacagtaaag
agagtgctgggtttctcagagcccaccgtggtcacagcagcattgaactgtgtggggaag
ggcatggacaagaagaaggcagctgaccacctgaaacctttccttgatgattctactctt
cgatttgtggacaaattgtttgaggctgtagaggaaggccgaagttctaggcattccaag
tccagcagtgacaggagcagaaaacgagagttaaaggaggtgtttggtgatgactctgag
atctccaaggaatcatcaggagtaaagaaacgacgaataccccgttttgaggaggtagaa
gaagagccagaggtgattcctggacctccatcagaaagccctggcatgttgactaaactc
cagatcaaacagatgatggaagcagcaacacgacaaattgaggagaggaaaaaacagctg
agcttcattagccctcctacgcctcagccaaagactacttcttcctcccagccagagcga
cttccaattggcaatactattcaaccctcccaggctgccacttttatgaatgatgccatt
gagaaggcaaggaaagccgctgaactacaagctcgaatccaagctcaactggcactgaag
ccagggctaattggcaatgccaacatggtgggcctcgctaatctccatgccatgggcatt
gctccaccgaaggtagagttaaaagatcaaactaaacctacaccactgatcctagatgag
caaggtcgaactgtagatgccacaggcaaggagattgagctgacacatcgtatgcctact
ctgaaagccaacattcgtgctgtgaagagagaacaattcaagcaacagctgaaggaaaag
ccatcagaagacatggagtccaataccttttttgacccccgagtctcaattgccccctca
cagcgccagagacgtacttttaaatttcatgacaagggcaaatttgagaagatcgctcaa
cgattacgaacaaaggctcaactggagaagctacaggcagagatttcacaggctgctcga
aaaacaggcattcatacttcaactaggcttgccctcattgctcctaaaaaggaactaaag
gaaggagatatccctgaaattgagtggtgggactcttacataatccccaatggctttgac
cttacagaggaaaatcccaagagagaagattattttggaatcacaaatcttgttgaacat
cctgcccagctcaatcctccagttgacaatgatacaccagttactctgggagtatatctt
acgaagaaggaacagaagaaacttcggagacaaacaaggagggaagcacagaaagaacta
caggagaaagtcaggctaggcctgatgcctcctccagagcccaaagtgagaatttctaat
ttgatgcgagtattaggaacagaagctgttcaagaccctacgaaggtagaagcccatgtt
agagctcagatggcaaaaagacagaaagcgcatgaagaggccaacgctgcccggaaactt
acagcagaacagagaaaggtcaagaaaattaaaaagcttaaagaagacatttcacagggg
gtacacatatctgtatatagagttcgaaatttgagcaacccagccaagaagttcaagatt
gaggccaatgctgggcaactctacctgacaggggtggtggtactgcacaaggatgtcaac
gtggtagtagtggaagggggccccaaggctcagaagaaatttaaacgcctcatgctgcat
cggataaagtgggatgaacagacctctaacacgaagggagatgatgatgaagagtctgat
gaggaagctgtgaagaaaaccaacaaatgtgtactagtttgggagggtacagccaaagac
cggagttttggagagatgaagtttaaacagtgccccacagagaacatggctcgagagcat
ttcaaaaagcatggagctgaacactactgggacctcgcactcagtgaatctgtgttggag
tccactgattga
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