Perognathus longimembris pacificus (Pacific pocket mouse): 125359070
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Entry
125359070 CDS
T08928
Symbol
Sema6c
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6C
KO
K06842
semaphorin 6
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
125359070 (Sema6c)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
125359070
NCBI-ProteinID:
XP_048212522
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All DBs
Position
11:43521719..43539360
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AA seq
966 aa
AA seq
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MPRAPYLMPLLLLLLLLLLSLPHTQAAFPQDPLPLLTSDLQGTSPLTWFRGLEDDAVAAQ
LGLDFQRFLTLNRTLLVAARDHVFSFDLQAQEEGEGLVPNKYLTWRSQDVENCAVRGKLT
DECYNYIRVLVPWDSQTLLACGTNSFSPVCRSYGITSLQQEGEELSGQARCPFDATQSNV
AIFAEGSLYSATAADFQASDAVVYRSLGPQPPLRSAKYDSKWLREPHFVHALEHGDHVYF
FFREVSVEDARLGRVQFSRVARVCKRDMGGSPRALDRHWTSFLKLRLNCSVPGDSTFYFD
VLQALTGPVNLHGRSALFGVFTTQTNSIPGSAVCAFYLDDVERGFEGKFKEQRSLDGAWT
PVSEDRVPSPRPGSCAGVGGAALFSSSQDLPDDVLTFIKAHPLLDPAVPPATHQPLLTLS
NRALLTQLAVDGMAGPHSNTTVLFLGSNDGTVLKVLPPGGQSGEPEAILLEEIDAYSPSR
CSGKRAAHTARRIIGLELDTEGHRLFVAFSGCIVYLPLSRCARHGACQRSCLASXDPYCG
WHSSKGCVDIRGPGGTDVDQVGDHESTEQGDCRDGATGSRSGPGDSAYVLLGPGPSLETP
SSPRDAHPGPLSSTLGAHTEGVRRDLLPASASRSVPIPLLLASVAAAFALGASLSGLLVS
CVCRRTHRRRSKDVETPVLPRPLSLRSLARLHGAGLEPPPPPKDGDAAPTPQLYTTFLPP
AEAGPPPELACLPTPESTPELPVKHLRASGGPWEWNQNGNNAKEGAGRARGGHAAGGPAP
RVLVRPPPPGCPGQAVEVTTLEELLRYLHGPQPPRKAAEPPAPFTCRPLPPEPAPSPPLF
ADSGALPRECAPPLRLDVPPDGQAAAPAAAPAPARPALSAPAPRLGVGGSRRLPFPTHRA
PPALLTRVPSGGPSRYSGGPGRHLLYLGRAEGYRSRAPKRVDVDKSPLSPKSPLVGAAPH
GSHFNF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgccccgagccccctacctcatgcccttgctgctactgctactgctgctgctgctctca
cttccccacacccaggctgcctttcctcaggaccccctccctctgttgacctctgacctg
caaggtacttccccattaacttggttccggggcctggaggacgatgctgtggctgcacaa
cttgggttggactttcagagattcctgaccttgaaccggaccttgctagtggctgcccgg
gaccacgtcttctccttcgatcttcaagcccaagaagaaggggaggggctggtgcccaac
aagtatctaacatggaggagccaagatgtggagaactgtgcagtgcgggggaagctaacg
gatgagtgttacaactacattcgcgttctcgttccctgggactcccagacactcttggcc
tgtgggacaaactcgttcagccctgtgtgccgcagctatgggatcacttcactgcagcag
gagggtgaagagctgagtgggcaagctcgatgcccctttgatgccacccagtccaatgtg
gccatctttgcagagggcagtctgtactcagccaccgccgccgacttccaggccagcgat
gctgtcgtttaccgaagcctcgggcctcagcctccactccgttcggccaagtacgactcc
aagtggctccgagagccacactttgtccatgccttggagcatggggaccatgtttacttc
ttcttccgagaggtgtctgtggaggatgcccggctgggaagagtgcagttctcccgcgtg
gcgcgggtgtgtaaacgggacatgggtggctcgccccgtgccctggaccgccactggaca
tccttcctaaagctgcggctcaactgctctgttcctggggactctaccttctactttgac
gtcctgcaggccttgactgggcctgtgaacctgcatggtcgctctgctctcttcggggtc
ttcaccactcagaccaatagcattcctggctctgcagtctgcgccttctacctggacgat
gttgaacgtgggtttgagggaaagttcaaggagcagaggagtctggatggggcctggacc
cctgtgtctgaggacagggttccttcacccaggccaggctcctgtgcaggtgtgggaggc
gctgccttgttctcctcttctcaagacctcccggatgatgtcctgaccttcatcaaggct
cacccactgctcgaccctgctgtgccacccgccacccaccagcctctcctcactctcagt
aacagggcgctactgacccagctagctgtggacggtatggctggcccccatagtaacacc
accgtcctgttccttggctccaatgacgggacagtgctgaaggtgctgcccccagggggg
caatccggggaacctgaggccatcctactggaagagatcgatgcctacagcccctcccgg
tgcagtgggaagcgggcagcccacacagcacgacggattatagggctggagctggacaca
gagggccacaggctttttgtggccttctctggctgtattgtctacctccctctgagccgc
tgtgcccggcatggggcctgtcagaggagctgtctggcttctncggacccatactgcgga
tggcatagctccaaaggctgcgtggatatcagaggacccggtgggactgatgtggaccag
gttggggaccacgagtccacggagcagggtgactgtcgagatggagccacagggagtcgg
tctggccctggggactctgcttatgtgcttctgggtcctggcccttcccttgagaccccc
agttccccccgtgatgcccaccccgggcccctgtcttccactctcggagctcacactgag
ggcgtgcgccgggacctcctcccagcctcggcctcccgctccgtccccatcccgctgctc
ctggccagcgtggccgccgccttcgccctgggcgcctcgctctccggcctcctggtgtcc
tgcgtgtgccgccgcacccaccgacgtcggagcaaggacgtggagacgccggtgctgccg
cgcccgctgtccctgcgcagcctggctcggctgcacggggcgggcctggagcccccgccg
ccgcccaaggacggggacgcggcgcccacgccgcagctctacaccaccttcctgcctccg
gccgaggccgggcccccgcccgagctggcctgcctgcccacgcccgagtccacgcccgag
ctgccggtcaagcaccttcgcgcctccgggggcccgtgggagtggaaccagaacgggaac
aacgccaaggagggtgcggggcgcgcgcggggcggccacgcggccggcgggcccgcgccg
cgcgtgctggtgaggccgccgccgccgggctgcccggggcaggcggtggaggtgaccacg
ctggaggaactgctgcgctacctgcacggcccgcagccgccccgcaaggccgccgagccc
ccggccccgttcacctgccggccgctgccgcccgagccggcccccagccctcctctcttc
gcggactcgggggcgctcccccgcgagtgcgcgccgccgctgcggctggacgtgcccccc
gacggccaggccgccgcgcccgccgccgcccccgccccggcgcggcccgcgctctccgcc
ccggctccccgcctcggcgtcgggggcagccgccgcctgcccttccccacgcaccgggcg
cccccggcgctgctcacccgagtcccctcgggggggccctccaggtactccggggggccc
gggagacacctcctgtatctgggccgtgccgagggctaccgcagccgcgcccccaagagg
gtggacgtcgacaagtccccgctgtcccccaagtctcccctcgtcggggccgcccctcac
ggcagccacttcaacttttag
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