Perognathus longimembris pacificus (Pacific pocket mouse): 125359093
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Entry
125359093 CDS
T08928
Symbol
Pogz
Name
(RefSeq) pogo transposable element with ZNF domain isoform X1
KO
K22594
pogo transposable element with ZNF domain
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125359093 (Pogz)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
125359093 (Pogz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_1
HTH_Tnp_Tc5
zf-C2H2_4
HTH_28
HTH_23
Motif
Other DBs
NCBI-GeneID:
125359093
NCBI-ProteinID:
XP_048212565
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All DBs
Position
11:43197919..43260078
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AA seq
1411 aa
AA seq
DB search
MADTDLFMECEEEELEPWQKISDVIEDSVVEDYNSVDKTTVSVSQQPVSAPVPIAAHASV
AGHLSTSTTVSSSGAQNSDSTKKTLVTLIANNNAGNPLVQQGGQPLILTQNPAPGLGTMV
TQPVLRPVQVMQNANHVTSSPVASQPIFITTQGFPVRNVRPVQNAMNQVGIVLNVQQGQT
VRPITLVPAPGTQFVKPTVGVPQVFSQMTPVRPGSTMPVRPTTNTFTTVIPATLTIRSTV
PQSQSQQTKSTPSTSTTPTATQPTSLGQLALQPAGQSNQTSNPKLAPSFTSPPAVSIASF
VTVKRPGVTGENSNEVAKLVNTLNTIPSLGQSPGPLVVSNNSSTHVAQRTSGPESSMKVT
SSIPVFDLQDGGRKICPRCNAQFRVTEALRGHMCYCCPEMVEYQKKGKSLDSEPSVPSAA
KPSSPEKTAPVTSTPSSTPIPALSPPTKVPEPNENVGDAVQTKLIMLVDDFYYGRDGGKV
AQLSSFPKVATSFRCPHCTKRLKNNIRFMNHMKHHVELDQQNGEVDGHTICQHCYRQFST
PFQLQCHLENVHSPYESTTKCKICEWAFESEPLFLQHMKDTHKPGEMPYVCQVCQYRSSL
YSEVDVHFRMIHEDTRHLLCPYCLKVFKNGNAFQLHYMRHQKRNVYHCNKCRLQFLFAKD
KIEHKLQHHKTFRKPKQLEGLKPGTKVTIRASRGQPRTVPIPSSDTLPSTLQEAAPLTST
DPLPVFLYPPVQRNVQKRAVRKMSVMGRQTCLECSFEIPDFPNHFPTYVHCSLCRYSTCC
SRAYANHMINNHVPRKSPKYLALFKNSVSGIKLACTSCTFTTSVGDAMAKHLVFNPSHRS
SSILPRGLNWLSHSRHGQTRDRVHDRNLKNMYPPLSLPPNKAATVKSAGATPPEHEELPM
PVAQALPSPASTATPPPTPTHSQPLALPPLAPEGTKCLNVDDQDEGGLVTQEPEPASGGG
GNGGIGKKEQLSVKKLRVVLFALCCNTEQAAEHFRNPQRRIRRWLRRFQASQGENLEGKY
LSFEAEEKLAEWVLTQREQQLPVNEETLFQKATKIGRSLEGGFKISYEWAVRFMLRHHLT
PHARRAVAHTLPKDVAENAGLFIEFVQRQIHNQDLPLSMIVAIDEISLFLDTEVLSSDDR
KENALQTVGTGEPWCDVVLAILADGTILPTLVFYRGHIDQPANVPDSILLEAKESGYSDD
EIMELWSSRVWRKHTACQRSKGMLVMDCHRTHLSEEVLALLSASSTLPAVVPAGCSSKIQ
PLDVCIKRTVKNFLHKKWKEQAREMADTACDSDVLLQLVLVWLSEVLGVIGDCPELVQRS
FLVASVLPGPDGNINSPTRNADMQEELIASLEEQLKLSGEQSEEPSASTPRLRSSPEETV
EPESLHQLFEGESETESFYGFEEADLDLMEI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgacttgtttatggaatgtgaggaggaggagttggagccatggcagaaa
attagtgatgtcattgaggactctgtagttgaagattataattcagtggataaaactaca
gtttctgtgagccagcagccagtctcggctccagtgcccatcgctgcccatgcttctgtt
gctgggcacctctctacatccaccaccgttagtagcagcggggcacagaacagcgacagt
acaaagaagactcttgtcacactaattgcgaacaacaatgctggcaatcctttggtccag
caaggtggacagccacttattttgacccagaatccagcaccaggcctgggaacaatggtt
actcaaccagtattgagacctgtccaggtcatgcagaatgcaaatcatgtgactagttcc
cctgtggcctcccaaccaatattcatcactactcagggatttcctgtaaggaatgttcgg
cctgtacaaaacgcaatgaatcaggttgggattgtgctgaacgtacagcaaggccaaacg
gttagaccaattacactagtcccagccccaggtacacagtttgttaagccgacagttgga
gtcccacaagtgttctctcagatgaccccagtgaggccaggctccacaatgcctgtgagg
ccaaccaccaacaccttcaccactgtcatcccagctactctaaccattcggagcaccgtc
ccacagtcccagtcacagcagaccaagtccactcccagcacttccaccactcccactgcc
acacagccaacctcattggggcagctagctcttcagcctgcaggccagtccaaccagacc
tcaaatcccaagctagctccctccttcacctctccacctgcagtgagcattgccagcttt
gtcactgtgaagcgaccaggggttactggtgaaaatagcaatgaagtggccaaattggtg
aatactcttaacaccatcccttccctgggtcagagtcctgggccattggtggtatccaac
aacagttctacccatgttgctcaaagaaccagcggacctgaatcttcaatgaaagtgacc
tcttccatcccagtgttcgacctccaggatggtggacggaaaatatgtccccggtgtaat
gctcaattccgtgttactgaagctttgagaggtcacatgtgttactgttgcccagaaatg
gttgaataccagaagaaaggaaagtccctggattcagaacccagtgtcccatcagctgca
aagccctcatcccctgagaagacagctcctgtcacttccacaccctcttctacacctatt
cctgctctgtcaccacctactaaagtaccagagccaaatgagaatgttggtgatgccgtc
cagaccaagctcattatgctagtagatgatttctactacggacgggatggtggaaaagta
gcccagctctcaagctttcctaaggtcgccacatctttccgatgcccacattgtactaaa
aggctaaaaaacaacattcgatttatgaaccatatgaaacaccacgtagaacttgatcag
cagaatggtgaggtagatggtcataccatctgccaacattgttaccgccagttttccact
cccttccagctccagtgccacttggaaaatgttcatagtccctatgaatctactaccaaa
tgcaagatctgtgagtgggcatttgaaagtgaaccactgtttctccagcatatgaaggat
actcacaagcctggagagatgccttatgtttgtcaggtgtgtcaatatcgctcctcactc
tactctgaggttgatgtccattttcggatgatccatgaagatacccggcatttgctctgc
ccttattgcttgaaggtcttcaaaaatggcaatgccttccaactacattacatgaggcac
cagaagagaaatgtttatcactgcaacaagtgccggctgcagtttctctttgccaaggac
aaaattgaacacaagcttcagcatcataaaaccttccgtaaacctaagcagcttgagggc
ttgaaaccaggcaccaaggtgacaatccgcgcttcacgagggcagccgagaactgttcca
atcccctccagtgatacacttcccagcaccttgcaggaggcagcaccactgacgtcaacg
gaccccctgcccgttttcctttatccccctgtccaacgcaatgtccagaagagagctgtt
aggaaaatgagtgtcatgggccgacagacatgtctggaatgtagctttgagatcccagat
ttccctaaccatttccctacttacgtccactgctcactctgtcgctatagtacctgctgc
tcccgagcttatgccaaccatatgatcaacaatcatgttccacggaagagccccaaatat
ttggctttgtttaaaaactctgtgagtggaatcaagctagcctgcacttcatgtaccttt
actacctctgtgggagatgccatggccaaacatttggttttcaacccctcccacagatcc
agcagtatcctgccacggggactcaattggctatctcactcaaggcatggtcagactcgt
gaccgagtacatgaccggaacttgaagaatatgtaccctcctctttctttgccacctaac
aaagctgccactgtgaaatctgcaggagccaccccacctgagcatgaagagctcccaatg
cctgtggctcaagcactcccatcaccagcctcaactgcaaccccgccgccaacccccact
cactcgcagcctttagcccttccacccttggccccagaggggaccaagtgtctgaatgtt
gatgaccaggatgaaggtggcctagtcacccaggaacctgagccagcatcaggtggcgga
ggtaatggtggaattggtaagaaagagcagctatcagtaaagaagcttcgcgtagtactg
tttgccctatgctgcaatacagaacaggcagctgaacacttccggaacccccagcgacgt
attcggcgttggcttcgtcgattccaggcctcccagggggagaatctagagggcaaatac
ctcagctttgaggcagaagagaaactggctgagtgggtactgacccaaagggagcagcag
ctccctgtgaatgaggagaccttgttccagaaggccaccaaaataggacgttctttggag
ggggggtttaagatctcctatgaatgggctgtgcgcttcatgttgcggcaccatctgact
ccccatgcccggcgagctgtggctcacaccctaccaaaggatgtagcagaaaatgcagga
ctcttcattgaatttgtacagcggcagattcacaaccaggacttacccttgtctatgatt
gtggctattgatgagatctctttgttcctggatacagaggtgctgagcagtgatgaccgc
aaggagaatgccctgcagactgtgggcacaggggagccttggtgtgacgtggtgctggcc
attctagcagatggcaccatcctcccaaccctggttttctatcgaggacacatagatcag
cccgctaatgtgccagactctatattgctagaagcaaaggaaagtggctacagtgacgac
gagatcatggagctgtggtcatctcgagtgtggaggaagcacacagcttgccagcgtagc
aagggaatgctagtgatggactgtcatcgcactcatttgtctgaagaggtactggctctg
cttagtgcctctagcacattgcctgcagtggtaccggcaggctgcagctccaaaatccag
ccattagatgtatgcatcaaacggactgtgaagaactttctgcacaaaaagtggaaggaa
caggctcgggaaatggcagacactgcttgtgattcagatgttctgcttcagctagtgcta
gtttggctgagtgaggtgctgggtgtcattggagactgcccagagctagttcagcgctcc
ttccttgtggctagtgttctgccaggccctgatggcaacattaactcacctactcgcaat
gctgacatgcaggaggagctcattgcctccctagaggagcagctaaagctgagtggggaa
cagtctgaggagccctcagcttccaccccccgactcagatcatctcctgaagagacagtt
gagcctgaaagccttcaccagctgtttgagggggaaagtgaaacagagtctttctatggc
tttgaggaggctgacttagatctgatggagatctga
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