Perognathus longimembris pacificus (Pacific pocket mouse): 125359140
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Entry
125359140 CDS
T08928
Symbol
Thbs3
Name
(RefSeq) thrombospondin-3
KO
K04659
thrombospondin 2/3/4/5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04145
Phagosome
plop04151
PI3K-Akt signaling pathway
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop04820
Cytoskeleton in muscle cells
plop05144
Malaria
plop05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125359140 (Thbs3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125359140 (Thbs3)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
125359140 (Thbs3)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125359140 (Thbs3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125359140 (Thbs3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
125359140 (Thbs3)
09174 Infectious disease: parasitic
05144 Malaria
125359140 (Thbs3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359140 (Thbs3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plop04147
]
125359140 (Thbs3)
00536 Glycosaminoglycan binding proteins [BR:
plop00536
]
125359140 (Thbs3)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Phagocytosis
Opsonins
125359140 (Thbs3)
Exosome [BR:
plop04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
125359140 (Thbs3)
Exosomal proteins of colorectal cancer cells
125359140 (Thbs3)
Exosomal proteins of bladder cancer cells
125359140 (Thbs3)
Glycosaminoglycan binding proteins [BR:
plop00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
125359140 (Thbs3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
cEGF
EGF
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
125359140
NCBI-ProteinID:
XP_048212635
LinkDB
All DBs
Position
11:40300186..40311935
Genome browser
AA seq
956 aa
AA seq
DB search
MEAQELRGALALLLLCSFASASQDLQVIDLLTVGESRQMVAVAERIRTALLTAGDIYLLS
TFRLPPKQGGVLFGLYSRQDNTRWLEASVVGKINKVLVRYQREDGKVHAVNLQQAGLADG
RTHTALLRLRGPSRPSPGLQLYVDCKLGDQYAGLPALAPIPPAEVSGLEIRTGQKAYLRM
QGFVESMKIILGGSMARVGALSECPFQGEESIHSAVANALQSILGEHTKALVTQLTIFNQ
ILVELRDDIRDQVKEMSLIRNTIMECQVCGFHEQRSHCSPNPCFRGVDCMEVYEYPGYRC
GPCPPGLQGNGTHCDDINECAHADPCFPGSSCINTMPGFHCEACPRGYKGTQVSGVGIDY
ARASKQVCNDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQSQGCLPARTCHS
PTHSPCHVHAHCLFERNGAVSCQCNVGWAGNGNVCGPDTDIDGYPDQALPCMDNNKHCKQ
DNCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPNKDQQNSDTDSFGDACD
NCPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRDEDGVGDACDS
CPEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCPQLPNSSQLDSDNDGLGDECD
GDDDNDGIPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDDFDNDAVVDPLDVCPESAE
VTLTDFRAYQTVVLDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTVTDDDYAGFLFSYQDSGRFYVVMWKQTEQTYWQATPFRAVAQPGLQLKAVTSVTG
PGEHLRNALWHTGHTPDQVRLLWTDPRNVGWRDKTSYRWQLLHRPQVGYIRVKLYEGPQL
VADSGVIIDTSMRGGRLGVFCFSQENIIWSNLQYRCNDTVPEDFEPFRRQLLQGRV
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcaggaacttcggggcgccctggctcttctcctcctttgctcttttgcatct
gccagtcaggatctgcaggtaattgacctgctgactgtgggagagtcccggcagatggtg
gctgtggcagagaggatccggacggcattactcactgctggggacatctacctcttgtct
accttccgcctgccccccaagcaaggtggcgtcctctttggcctctattctcgccaagac
aacactcgatggctggaggcctctgttgtgggcaagatcaacaaagtactggtgcggtac
cagcgggaggatggcaaagtccatgcagtgaacctacagcaagcaggcctggctgatggg
cgcacgcacacggctctcctgaggcttcgaggaccatcccgacccagccccggcttgcaa
ctctatgtggactgcaaactgggtgaccaatatgctggccttccagcactggcccccatt
cctccagcagaggtcagtgggctggagattaggacaggacagaaggcttatctgaggatg
cagggctttgtggaatcgatgaaaattattctgggcgggtcaatggctcgggtaggagcc
ctgagtgagtgcccattccaaggtgaagagtcaatccacagtgcagtggcgaatgcactg
cagtccattctaggggaacataccaaggcattggtcacccaactcaccatcttcaaccag
atcctagtggagctgcgggatgacattcgagaccaggtgaaggaaatgtccctcatccga
aacactatcatggagtgtcaggtgtgcggtttccacgagcagcgttctcactgcagcccc
aacccctgcttccgaggtgtggactgcatggaagtatatgaatacccaggctatcgctgt
ggtccctgtcccccgggcctgcagggcaacggcacccactgcgatgatatcaatgagtgt
gctcatgctgatccctgtttccctggctccagctgtatcaacaccatgcctggcttccat
tgtgaggcctgtcctcgaggatacaagggcacccaggtgtctggtgtgggcatcgactat
gcccgggccagcaaacaggtctgcaatgacattgatgaatgtaatgatggcaataatggt
ggctgtgacccaaactccatctgcaccaacactgtggggtctttcaaatgtggtccctgc
cgcctgggtttcctgggcaaccagagccaaggatgcctaccagcaaggacctgccacagc
ccaacccacagcccctgccacgtccatgcccactgtctctttgaacgcaatggtgcagtg
tcctgccagtgtaatgtgggctgggcagggaatgggaacgtgtgtggacctgatacggac
atcgatggctacccagaccaggcgcttccctgcatggataacaacaaacactgcaagcag
gacaactgccttttgacacccaactctgggcaggaagatgctgataatgacggtgtaggg
gaccagtgtgatgacgatgctgatggggacgggatcaagaatgtcgaggacaactgtcga
ttatttcctaacaaggaccagcagaactcagatacagattcatttggtgatgcctgtgac
aactgccccaatgttcccaacaacgaccagaaggacacagatggcaatggagaaggagat
gcttgtgacaacgacgtggatggggatggcatccccaacggactggacaattgtcctaaa
gtacccaacccacttcagacagacagggatgaggatggagtgggagatgcttgtgacagc
tgccctgaaatgagcaatcctacccagacagatgcagacagcgacctggtgggtgatgtg
tgtgacactaatgaggacagcgatggggatggacatcaggacaccaaggacaactgccct
cagttaccaaacagctcccagttggactcagacaatgatggacttggagatgagtgtgat
ggagatgatgacaatgatggtatcccagattatgtaccacctggccctgataactgtcgc
ctggtacccaatcccaatcagaaggactcagatggtaatggtgttggtgatgtatgtgag
gatgactttgacaatgatgcagtggttgatcctctggatgtatgccccgaaagtgcagag
gtaaccctcacagattttcgggcctatcagactgtcgtcctggatcctgaaggtgatgct
cagattgacccaaactgggttgtactcaaccagggcatggaaattgttcagaccatgaac
agtgaccctggcctggcagttggatatacagccttcaacggtgtggactttgaaggcacc
ttccatgtgaacacagtcactgacgatgactacgcaggctttctcttcagttaccaggat
agtggacgcttctatgtggttatgtggaagcagacagagcagacctactggcaggctaca
cctttccgggctgttgctcagcctggcctgcaactcaaggcggtgacatcagtgactggc
ccaggtgagcatctccggaatgccttgtggcatactggccacacccctgatcaggtccga
cttctgtggactgatccacgaaatgtgggctggcgtgacaagacctcctatcgctggcag
ctgttgcatcggccccaagttggttacattcgggtgaagctctatgagggtccccagctc
gtggcagattctggggtgatcatcgacacatccatgcgagggggacgtcttggtgtcttc
tgcttctcccaagaaaacatcatatggtccaatctccagtaccgatgcaatgatacagtg
cctgaggactttgagccattccggaggcagctactacagggaagggtgtga
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