Perognathus longimembris pacificus (Pacific pocket mouse): 125359146
Help
Entry
125359146 CDS
T08928
Symbol
Dennd4c
Name
(RefSeq) DENN domain-containing protein 4C isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359146 (Dennd4c)
Membrane trafficking [BR:
plop04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125359146 (Dennd4c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
DUF2464
PPR_2
PPR_3
PPR_long
Motif
Other DBs
NCBI-GeneID:
125359146
NCBI-ProteinID:
XP_048212688
LinkDB
All DBs
Position
1:119339018..119435189
Genome browser
AA seq
1950 aa
AA seq
DB search
MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDTKSAGPKAPITDIAVINKSAGETVPEG
YTCVEATPSALQANLNYGSLKSPEVFLCYKRGRDKPPLTDIGVLYDGKERLISGCEVIAA
TPYGRCANVNNSSTSSQRIFITYRRAPSVRPQNSLAVTDICVIITSKGETPPHTFCKVDK
NLNCGMWGSSVFLCYKKSVPASNALAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATI
ECWDPQTKHPLPVFSTFVLTGSSAEKVYGAAIQFYESYSRELLTEKQLMQLGLLTPVERK
MVIKSINSNKCICLLSHWPFFEAFKKFLMFIYKLSVSGPHPLPIEKYISHFMQNIPFPSP
QRPRILVQLSVHDALILSQPVCTPLPLSGANFSTLLMNLGPENCATLLLLVLLESKILLH
SLRPAVLTGVAEAVVAMIFPFHWECPYIPLCPLSLAAVLSAPFPFIVGVDSRYFDLHDPP
QDVVCIDLDTNMLYVSDEKKNMNWKHLPKKPCKNLLGTLKKLYPQVCSVHQKTQEGSAIE
MTPIEADFSWQKKMTQLEMETQEAFLRFMASILKGYRTYLRPITEAPSNKATAVDSLFDR
QGFLKSRDRAYTKFYTLLSKTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGIEKT
DKVDWDSAEDTKLIELDDSQKSEHTVFIMPPEPPPDDGKDLSPKYSYNFFPRLDLKLFDR
PQELKLCFSRHPTGNNITNSPALMAKRTKQEIKTAHKLAKRCYTNPPQWAKCLFSHSYSL
WFICLPAYVRVSHLKVRALQHAYDVLIKMRKIDVDPLDEVCYRVVMQLCGLWSHPVLAVR
VLFEMKTAKIKPNAITYGYYNKVVLESQWPSTTRSGIFLWTKVRNVVHGLAQFRKPLKKT
MQNSPVSSISAPQNATGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLDSIDNHSSTG
GQSDQGYGSKDELIKDDPETHVSEEQVAQELITKTKVQIQDVSDGSAVVVKYSQPSPETQ
SPVDPPAWGNSIVKAPSGIFDINNRKGSTGSTSNTLFSTQDPLEDTVFEVTNFKKNGDKG
ERRQKHFSERSCSFSSESRAGMLLKKSSLDLNSSEMAIMMGADAKILTAALTCPKTSPLH
VTRTHSFENASGHLVDTSTHVSENIWDSERRSSTMLEMLEESQEFLEPVIDDNVAKTTPV
TFDSLQNNSNSNQSRDLKAGSKHLMNKRSSSHGAVKAIEREDVETGLDPLSLLATECTEE
KSPDSEENILSPVISRNLADEIESYMNLKSPLGSKSSSMELSGEGNTGVAASHPLERRSS
LPFDHGPPAQENPESEKYSSVVSRSKTFTGRFKPQTPYRTHKDRSSLSALVRSSPHSPLG
SVVNSLSGLKLDNILSGPKIDVLKSGMKQAATVASKMWVAVASAYNYSDDEEETGRDYSF
PAGLEDHILGENVSTNTSVSGLVPSELTQSNTSLGSSSSSGDVGKMQYSTGDVPFPRGIK
RQDFEKSDHGSSQNTSMSSIYQNCAMEVLMSSCSQCRACGALVYDEEIMAGWTADDSNLN
TTCPFCKSNFLPLLNVEFKDLRGSASFFLKPSTSGDSLQSGSLPLASEPLEHKPVCNSAE
PDLINFMDFPKHNQTITEEASHTVDSSGELKQASGDVQTMKISSVPNSSSKRNVSLTRSH
SVGGPLQNIDFSQRPYHGISTVSLPNSLQEVVDPLGKKPNPPPVSVPYLSPLVLRKELES
LLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILTSEHCNEGVQLPLSSL
SQDSKLVYIQLLWDNINLHQEPEEPLYVSWRNSNSEKKLSLLSEEQEATSTLVEAIRQSI
RHNDVLRPIHLLSQQMKPDMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYGLAYNSLS
SEILKKLQRIDAPPSISAQWCRKCFGAPLI
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagacaaaggtccaagagtgacagactactttgttgtggcaggtctcacagat
acatcaactcttttggatcaagaaataaatcgtttagatactaagtcagctgggcctaag
gctccaattacagatattgctgttattaacaaatcagctggggaaacagtacctgaaggc
tacacctgtgttgaagccaccccatctgcactccaagcaaacttgaactatggaagtctg
aaaagcccagaagttttcctgtgttacaagagagggagagataaaccaccccttacagat
attggggttttatatgatgggaaagaaagacttatttcaggatgtgaagtgattgctgcc
actccctatggtcgctgtgccaatgtcaacaacagttccacttcttcacagagaatcttt
atcacttaccgaagagctccttcagttcgaccccagaactccttggctgtaactgatatt
tgtgttattataaccagcaaaggagaaacccctcctcataccttctgcaaagttgacaaa
aatctaaattgtggcatgtggggttccagcgtgtttctatgttataagaagtctgtgcct
gcttcaaatgcattagcatataaagctggtttaatatttaggtatccagaagatgactat
gagtctttcccactctccgaatctgtgcctctcttctgccttccaatgggagccactatt
gaatgttgggatccccaaaccaaacatccacttccagttttttcaacttttgttctgaca
ggttcttcagctgaaaaggtatatggagctgctatccagttttatgaatcctattctcgg
gaacttctaacagagaaacagctgatgcagctgggcctgttgacacccgtggagaggaaa
atggtcatcaaatccatcaattcaaacaaatgcatttgtttactgtcacactggcctttt
tttgaagcttttaaaaaatttcttatgtttatctacaaactctctgtgtctggaccacat
cctcttcccattgagaagtacatttcacattttatgcagaacatcccttttccttcacca
caaagaccaagaatacttgtacagctgtcagttcatgatgcattaatattatcacagcct
gtttgtacacctttaccactaagtggagccaactttagcactttgctgatgaacctgggt
cctgagaactgtgcaacattgctgctcttggttttacttgagagtaagattctactgcat
tctcttaggccagctgtcttgactggggtagctgaagcagttgttgctatgatctttcca
tttcattgggaatgcccctacatccccctttgtcctctgtcattggctgcagtgcttagt
gcacccttcccattcatagttggagttgactcaaggtattttgatcttcatgacccacca
caagatgttgtttgcattgacttggatacaaacatgttgtatgtatcagatgaaaagaag
aacatgaactggaagcatcttcccaaaaagccatgcaaaaatctacttggtaccttaaag
aaattgtatcctcaggtttgttcagttcaccaaaaaactcaagaaggttcagcaattgaa
atgactccaattgaagcagatttctcctggcaaaagaagatgacacaacttgagatggaa
actcaagaggcatttttgcgatttatggcatctattttaaaagggtatagaacatatctc
agaccaattacagaggctccttcaaataaagccacagctgtagattcattgtttgatcga
caaggatttttaaaaagccgagatcgtgcctatacaaaattctatacccttttatccaaa
acacagatttttattcgttttatcgaagaatgcagttttgtaagtgataaagacactgga
ctggcattttttgatgactgcatagagaagttgtttcctgataaaggcatagagaaaaca
gataaggttgattgggattcagcagaagataccaaattgatagaattagatgattcacag
aaaagtgagcacactgtatttataatgccacctgagccacctcccgatgatggaaaggac
ctgtcaccaaagtacagttacaatttctttccaagactggatcttaagctttttgacaga
ccacaggagttgaaactttgttttagtagacaccctactgggaataacattacaaacagt
ccagctctcatggctaaaagaactaaacaggagataaagacagctcataaattggcaaag
agatgttacacaaatccaccacaatgggccaaatgtctgttcagtcatagttacagttta
tggtttatttgtctcccagcctatgttagagtttctcatctaaaggtcagagcacttcaa
catgcatatgatgtacttattaagatgaggaaaatagatgtggatccactggacgaggtg
tgctatcgagtagtaatgcagctttgtggactttggagtcatcctgttttagcagtaaga
gtcttatttgaaatgaaaactgctaaaataaagccaaatgctattacttatggttattac
aataaggtagttttggagagccagtggcctagcactacccgcagtggtatctttctgtgg
acaaaagtacggaacgtggtacatggcttggcacagtttaggaagccacttaaaaagact
atgcaaaactcaccagtttcctcaatatcagctcctcagaatgccacaggtggaagtgat
ggggacacggtgagccacggtagcgtggatagttctaatgatgctaacaatggggagcac
acagtcttcgtcagagacttaatcagacttgattccattgataatcactctagcacaggt
ggtcagtctgaccaaggctatgggtctaaggatgaactgataaaggatgatccagaaact
catgtgtctgaagaacaagtggcacaggagttgataactaaaacaaaagttcagatacaa
gatgtgagtgatgggtctgctgttgtggtaaaatattcacaacctagtcccgagactcag
agtcctgttgaccctcctgcctggggcaacagtattgtgaaagctccgtctgggatattt
gatatcaacaacaggaaaggtagcactggtagtacatcaaatacattattttctactcaa
gatccacttgaagatacagtatttgaagttactaatttcaagaagaatggtgacaaagga
gaaagaaggcaaaagcatttttcagagaggagttgtagttttagttctgaaagtcgagca
ggaatgttacttaagaagagcagtttggatttgaattcaagtgaaatggctatcatgatg
ggagcagatgccaagattctcacagcagcattgacatgtcctaagacttctccacttcat
gttacaagaactcacagctttgagaatgctagtggtcatctagttgacaccagtactcac
gtatctgaaaacatttgggattctgaacgtaggtcatctaccatgttagagatgcttgag
gaaagtcaagaattcttagagcctgtcattgatgataatgtagctaaaactacaccagtt
acatttgacagtctacaaaataatagtaacagcaatcaatccagagacttaaaagcagga
tccaaacatctaatgaataaaagaagcagttcacatggtgctgttaaggccattgaaagg
gaagatgttgaaactggacttgatcctctgtctcttttagctactgaatgtacagaagaa
aaatctcctgattctgaagaaaatatactttctccagttatttcaaggaatctggctgat
gaaattgaaagctacatgaacttaaaaagtcccctggggagtaaatcttctagtatggag
ttgagtggagagggaaacactggtgttgcagctagtcaccctttagaaaggagatcaagc
ctcccttttgatcatggtccaccagcacaagaaaatccagaaagtgaaaagtactcctct
gtagtgtcccggtctaaaacttttactgggcgttttaagccacaaactccatatcgaact
cataaggatcgttcgtctttatcggcattggtacgatcttcaccacatagcccactgggc
tctgtagtaaattcattatcagggctaaagctggataatatactctcagggcccaagata
gatgtcctaaaatctggtatgaaacaagcagcaacagtagcaagtaagatgtgggtggct
gtagcatctgcctacaactactcagatgatgaggaagaaactggtagagattatagcttc
ccagctggcctagaagaccatattttgggggagaatgtatcaactaacacaagtgtttca
ggattggttcccagtgaacttacccagagcaacacaagccttggaagtagcagcagcagt
ggagatgttggaaaaatgcaatactcaacaggtgacgttccatttccaagaggaataaaa
aggcaagactttgaaaaatcagatcatggttcatctcaaaataccagcatgtctagcatc
tatcagaattgtgcaatggaggttttgatgtcaagttgttcacaatgtagagcttgtgga
gcattagtttatgatgaagaaattatggctgggtggacggcagatgattcaaatttgaat
acaacctgtccattctgtaaaagcaactttttgcctctcctcaatgtagaatttaaagac
ttgagaggttctgcaagctttttcttgaaaccaagtacgtctggtgacagtttgcaaagt
ggcagcctgcctttggctagtgagcccctggagcacaaacctgtatgcaattcagcagaa
ccggacttgattaactttatggatttcccaaaacataaccagactataacagaagaagca
agccatacagttgactcgagtggtgaattaaagcaagccagtggagatgtccaaactatg
aaaatttcatctgtgcctaatagttcatcaaaacgaaatgtatctttgactcgaagccac
agtgttggaggccctttgcaaaatattgacttctcccaaagaccatatcatggcatttct
acagtcagtcttccaaatagtctgcaggaagttgtggaccctttaggaaagaaacctaat
cctccccccgtatctgtgccgtatttgagtcctctggtacttcgtaaagaacttgaatct
ctgttagaaaatgaaggtgatcaggtgattcatacatcctctttcatcaatcaacatcca
atcatattctggaaccttgtgtggtatttcagacgtttggacctacctagcaacttacca
ggacttattctcacatctgaacattgtaatgaaggtgtacagcttcctctgtcatctttg
tctcaagatagcaaacttgtatatattcagctgttatgggataatatcaatcttcatcag
gaaccagaagaacctctgtatgtttcttggaggaattctaattctgaaaagaagttgtct
cttctgtcagaggaacaagaagccacaagcactttagtagaagctattaggcagagtatt
cgacataatgatgtgcttagacccatccacctgctttcccaacaaatgaagccagacatg
aaaagacaaaggagtttatacagagaaatccttttcttatcattagtgtctcttggaaga
gaaaatattgatattgaggcttttgacaatgaatatggacttgcgtacaatagtctgtct
tcagagattcttaaaaaattacagagaattgatgccccaccaagtatcagcgcacagtgg
tgcaggaagtgttttggagcacctctcatttaa
DBGET
integrated database retrieval system
