Perognathus longimembris pacificus (Pacific pocket mouse): 125359211
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Entry
125359211 CDS
T08928
Symbol
Fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00900
Terpenoid backbone biosynthesis
plop01100
Metabolic pathways
plop05164
Influenza A
plop05166
Human T-cell leukemia virus 1 infection
Module
plop_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125359211 (Fdps)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
125359211 (Fdps)
05164 Influenza A
125359211 (Fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
plop01006
]
125359211 (Fdps)
Enzymes [BR:
plop01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125359211 (Fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125359211 (Fdps)
Prenyltransferases [BR:
plop01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125359211 (Fdps)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
125359211
NCBI-ProteinID:
XP_048212774
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All DBs
Position
11:complement(40186811..40201452)
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AA seq
449 aa
AA seq
DB search
MIRGAATMHPLVLAPCRECLVPPPYATPTMPLSRWLRSVGVFFLPAPCWVPRERWLCSPR
RPSLVHWYPAMGSWHGARCWCQVWTDEPRAFCSSLRMNGDQKSNAYAQEKQDFIQHFSQI
VKVLTEDEIGSPETGDAIARLKEVLEYNAIGGKYNRGLTVLVAFRELVEPKNQDADSLQR
ALTVGWCVELLQAFFLVSDDIMDSSLTRRGQTCWYKKPGIGLDAVNDALLLEACIYRLLK
FYCREQPYYLNLIELFLQSSYQTEIGQTLDLITAPQGHVDLGRYTEKRYKSIVKYKTAFY
SFYLPVAAAMYMAGIDGEKEHANAKKILLEMGEFFQIQDDYLDTFGDPSVTGKVGTDIQD
NKCSWLVVQCLQRGTPEQRQILQENYGQKDAKKVAQVKALYEELDLPAVFLQYEQDSYSR
LMSLIQQHAAPLPPAIFLGLANQIYKRKK
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgataaggggagctgccaccatgcatcctttggtgcttgccccctgcagggagtgcttg
gtgccccctccctatgccacccccacgatgcccctgtcccgttggctgagatctgtaggg
gtcttcttcctgccagccccctgctgggtaccccgggagagatggctatgttccccacgg
aggccctctctggtgcactggtacccagccatggggtcctggcatggtgcccgctgctgg
tgccaagtgtggacagatgagcctcgagctttctgctcctctctcagaatgaatggggac
cagaaatcgaatgcttatgcccaagagaagcaggatttcatccagcacttctcccagatt
gtcaaggtgctgactgaggatgagatagggagcccagagactggagacgccatagcgcgg
ctgaaggaggtcctggagtacaatgccatcggaggcaagtataaccgaggcttgacagtg
ctggtagcattccgggagctggtggagccaaagaatcaggatgcagacagtctccagcgc
gccctgaccgtgggctggtgtgtggaactgctgcaagctttctttctggtgtcagatgac
atcatggactcttccctcacccgcagggggcagacttgctggtataagaagcccggcata
ggtttggatgctgtcaatgacgctctgctcctggaagcgtgtatttaccgcctgctaaag
ttctattgccgggagcagccatactacctgaacctgatcgagctcttcctgcagagttcc
tatcagactgagattgggcagaccctggacctcatcacagctcctcagggccatgtggat
cttggcagatacactgagaaacggtataaatctatcgtcaagtacaagacggccttctac
tccttctacctgcccgttgcggctgccatgtacatggcaggcattgatggggagaaggaa
catgccaatgccaagaagatccttctggagatgggagaattctttcagatccaggatgat
taccttgacacctttggggaccccagtgtgacaggaaaggttggcactgatatccaggac
aacaaatgcagctggctggtggtccagtgtctgcagcggggcactccagaacagcgccag
attttgcaggaaaactacgggcagaaggatgccaagaaggtggcgcaggtgaaggcactt
tacgaggagctggacctgccggccgtgttcctgcaatacgagcaggacagttacagccgc
ctgatgagcctcatccagcagcacgcagctcctttgccgcctgccatcttcctggggcta
gccaaccagatctacaagcggaaaaagtga
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