Perognathus longimembris pacificus (Pacific pocket mouse): 125359296
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Entry
125359296 CDS
T08928
Symbol
Tars2
Name
(RefSeq) threonine--tRNA ligase, mitochondrial isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
125359296 (Tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
plop01007
]
125359296 (Tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plop03016
]
125359296 (Tars2)
Enzymes [BR:
plop01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
125359296 (Tars2)
Amino acid related enzymes [BR:
plop01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
125359296 (Tars2)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
125359296 (Tars2)
Prokaryotic type
125359296 (Tars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
125359296
NCBI-ProteinID:
XP_048212920
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All DBs
Position
11:complement(44041775..44055293)
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AA seq
723 aa
AA seq
DB search
MGLYRRWRPFWLRLSRSQACELHTVREASLPSPPYWLTERFGLFEELWEAQVKRLANTAQ
KEPRTIKISLPGGQKVDAVAWNTTPYQLAQQISSTVANTAVAAQVNGELYDLERPLETDS
NLRFLTFDSPEGKAVFWHSSSHVLGAAAEQLLGALLCRGPSTEYGFYHDFFLGKARTVRG
SELCVLEQICREMAAASQPFRRLEVSRDQLQQLFKDNPFKLRLIEEKVTGPTATVYGCGM
LVDFCRGPHLRHTGQIGGLKLLTNSSSLWRSSGAPETLQRVSGISFPTAELLRDWEARKE
EAVLRDHRRLGKEQELFFFHELSPGSCFFLPRGTRVYNALVAFIRAEYTRRGFSEVKTPT
LFSTKLWQLSGHWEHYKEDMFTLQPPGTNRAASTQSDPPAGLPTDTLALKPMNCPAHCLM
FAHRPRSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPDQLEAEIQGC
LDFLRSVYQVLGFSFRLALSTRPSDFLGEPSLWDQAEQILQQALEEFGEPWDLNPGDGAF
YGPKIDVRLHDALGRPHQCGTIQLDFQLPLRFGLQYKGQAGAPEHPVLIHRAVLGSVERL
LGVLAESCGGKWPLWLSPFQVVVIPVGPEQEEYARQVQQSLQAAGLASDLDADSGVTLSR
RVRRAQLAHYNFQFVVGQKEQSKRTVNIRTRDNRRLGEWDWTAAVHRLLELQNTRVPNAE
DIF
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggggctgtatcggcggtggcggcccttctggctccggctctcgcgatcacaagcctgc
gagttgcacacggtgcgtgaggcatccctgccttcccctccatattggttgaccgagagg
tttggcctttttgaggagctgtgggaagctcaggtaaagaggttggcaaacacggcacag
aaggaaccccggactattaagatttcacttcctggaggccagaaagtggatgctgtggcc
tggaatacaaccccttatcaactagcccagcagatcagttctacagtggctaatactgca
gtggctgctcaagtgaatggagaactttatgatctggagcggcccttggagacagattct
aatctcagatttctgacatttgactccccagaagggaaagcggtgttctggcactccagc
agccatgttctgggagcagccgccgagcagcttctgggtgctcttctctgccggggccca
agtacagaatatggtttctaccatgattttttcctgggaaaagctcggacagtccgtggc
tcggagttgtgtgtcctggagcagatttgccgggagatggcagctgcttcacaaccattc
cggaggctggaggtgtctcgggaccagctgcagcagctcttcaaggataacccctttaag
cttcgtctgatcgaggagaaagtgacaggcccaacagcaacagtgtatgggtgtggcatg
ttggtcgacttttgccggggcccccaccttcggcacactggacagattggagggctgaag
ctcctaacgaactcatcctccttgtggaggtcctcaggggctccagagacactgcagaga
gtgtcaggcatttcctttcccacagcagagctgctgagggactgggaagcacgaaaggaa
gaagcagtcttgcgggaccacagacgccttgggaaggaacaggagctcttcttcttccac
gaactgagccctgggagctgcttcttcctgccacggggaacaagggtgtataatgccctg
gtggcttttatcagggctgaatacacccgccgtgggttctcagaggtgaaaactcccaca
ctgttctctacaaaactctggcaactgtcaggccactgggagcattataaggaagacatg
ttcacactgcagcccccaggcacaaacagggctgccagcacccagagcgacccccctgcc
gggcttcccacagacacactggccctcaagcccatgaactgccctgcacactgcctaatg
ttcgcacaccggcccagatcttggcgggagctgcctgttcgcctggctgactttggagtc
ctgcatcgagcagaagcctcgggcagcctgggagggctgacccggctctggcgcttccag
caggacgatgcacatatcttctgtgcgccagatcagctggaagcagagatccaaggctgt
cttgatttcctccgctctgtgtatcaagtccttggcttctccttccgcctggcattatcc
acccggccatctgacttcctgggagagcccagcctttgggatcaggctgagcagatcctt
cagcaggccctggaggaatttggagaaccctgggaccttaatcctggagatggtgccttc
tatgggccaaagattgatgtacgcctccacgatgcccttggccgcccccatcagtgtggg
acaatccagctcgacttccaactacccctgagattcggcctccagtataaggggcaggcg
ggggcccccgagcatccggtcctcatccaccgagcagtgcttgggtctgtggaaaggctg
ttgggagtgctggcggaaagctgtggggggaaatggccactgtggctgtccccgttccag
gtagtggtcatccctgtggggcctgagcaagaggagtatgcccggcaggtacagcagagt
cttcaggctgcaggactggccagtgatctggacgcagactccggagtgaccctcagccgc
agagtccgccgggcccagctcgcccactacaacttccagtttgtagttggccaaaaagag
cagagtaagagaacagtgaacattcggactcgcgataatcgacggctcggggagtgggac
tggactgcggctgtgcacaggctgctggagctgcagaacaccagggtccctaacgctgaa
gacattttctga
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