Perognathus longimembris pacificus (Pacific pocket mouse): 125359411
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Entry
125359411 CDS
T08928
Symbol
Tdrd5
Name
(RefSeq) tudor domain-containing protein 5 isoform X1
KO
K18407
tudor domain-containing protein 5
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125359411 (Tdrd5)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125359411 (Tdrd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Motif
Other DBs
NCBI-GeneID:
125359411
NCBI-ProteinID:
XP_048213088
LinkDB
All DBs
Position
11:complement(22407794..22451097)
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AA seq
1050 aa
AA seq
DB search
MSEQERIQECLRKEIRSLLISTKNGLTVQQLEKEYLLMVGNHLPLRILGYRSTMELVLDM
PDVVSVCPCGNGTVILKAIPDESTKGIANLVAKQRSSNKVRNSIQKGRASACSGPTSRRV
PYRGRVPPILPAVVKSELKDLLALSPVLLSDFEKAFVKRFGRPFQYVQYGFLSMFEVLNA
ASDIISVEQTRAGSLLMLKKNVSEEKHRGWPAGKNFSPPFRMKQQGSYSTGCPVAKAPFS
QPTSNMEPPKQILTPEKTSFNAVETSRLNHTEKLNQLENTFKSVIAQIGPGGTINPELKH
KIKLVVAKFPEGLFISKLLGEFEIVFKEQLSPKKLGFLNITELVGALSDILRVEFREGEQ
DLLVFDAEMRPVQPDTTISSVKNPWLVQPTKKVEAKGWVSSPPRNSLSTAAVKETAWDGL
LKTCKDPEQKICKKPNLVVKPLQLQVETDKSQLNLAIANHDIPPDAARKKKLCKLPPLDT
STLIGVFVEYIVSPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYIMPEYFIQPG
HLCCVKISEDKWWYRVIIHRILGKKEVEVFYPDFGNIGIVQKSSLRFLKCCYTKLPAQAI
PCSLAWVRPIEEHWTSRAILQFQKLCGLKPLVGVVNEYIDGILNIFLCDTSSNEDIYFHH
VLKTEGHAIICRENVPSKGFKNLNPLALYTKSSREPDDVVLTELGYPSQQHCLTDNPEKS
PQAKDSTLHTLQDVNNEKSLSDLKSVPKELLNDSEFSPLKTHKTCEGDPKWAILEPNNPK
EVNEDEVPSGMPCLESVTTGDDIWDENWLPLRARMGKGDAAPHLFTSSLVGKKQYSLCEE
MPQKDWCFSTSEDVWDGSGQHAGLVSGMNVEIQKAEGLSAQEKKSGTARIEMDPLDSSTL
PKLEELYISLTPSQLSTEGSQFEPRHIQTQPKYSQLSTQLSNSTPAVDESPEKFSPSVES
SPGSIKNEDFSSSDAVTLFKDKSQGGIDQLSLILSPTHQISQKLYIPRSTATAALGAAAR
LATSTSLLHWYPSMKGWKHEGQGEEGAEEK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacaggagcgtatacaggaatgtctgaggaaagaaataagatcacttcttatt
tctaccaaaaatggtttgaccgtgcagcagttggaaaaggagtacctgttgatggttggc
aaccatctaccactccggatcctggggtatcggtccaccatggagttggtgttagacatg
cctgatgtggttagtgtctgcccctgtggaaatggtaccgtaatactgaaagcaattcca
gatgaatctacaaaaggaatagcaaacttagttgcaaagcagaggagcagcaataaggtt
cgaaattccatacaaaagggaagagccagtgcttgctcagggccaacctctcgtcgagtg
ccttaccgaggaagggtgcctcccattctcccagctgttgtgaagagtgagttgaaagac
ctcttggcattgtctccggttctcctttctgattttgaaaaggcatttgtcaagcgattc
ggacgaccatttcaatatgtgcaatatggattcctctctatgtttgaggtgttgaatgca
gcttcagatatcatttctgttgagcagaccagagcaggttctttattgatgctaaagaaa
aatgtatctgaggaaaagcatagaggatggccagcaggtaaaaatttcagtccaccattt
agaatgaaacagcaggggtcatattccacaggctgcccagttgcaaaggcacccttttca
caaccaacttcaaacatggaaccaccaaagcaaatactgaccccagagaagacttcattc
aatgcagtggaaacttcaaggctgaatcacactgaaaaactaaaccagttagagaacaca
ttcaagtcagttattgcacaaattggacctggagggaccatcaatccagaactaaaacat
aaaataaaacttgttgtggctaaatttccggagggtttgtttatttctaaactgcttgga
gagtttgagatagtttttaaagaacagctttcacctaagaaattgggcttcttaaacata
acagaacttgttggagctcttagtgacattctccgtgttgagtttagggaaggagaacaa
gacttgctggtgtttgatgctgagatgaggcctgtacaacctgataccactatttcatca
gttaaaaacccatggctagttcaaccaactaagaaagtagaagccaaaggttgggtctcc
agtccccctagaaattcactgtctactgctgctgtaaaggaaactgcatgggatggcctc
ttgaaaacctgtaaagacccagaacagaagatatgcaagaagcctaatctggtggtaaag
cctttacaactgcaagtagaaacagacaaatcacagctcaacttggcaattgcaaaccat
gatatcccaccagatgctgcccggaagaagaaattatgcaaacttccaccattggatacc
agtactcttataggagtctttgtggaatatattgtttctcctagtcaattctacattcga
atctacagtagagattcatcagagttacttgaggacatgatgattgaaatgcggcgttgt
tactctaaccagctggtttctgatcgatacatcatgccagaatattttatccaaccagga
catctctgttgtgtaaagatttctgaggataagtggtggtatcgagttattatccatcgc
atccttgggaaaaaggaagttgaagtattctacccagacttcggaaatattggaattgtt
cagaaatcctctctgaggttcctcaagtgctgctacacaaagcttccagctcaggctatc
ccttgttctttggcttgggtgagaccaatagaggaacattggacatcccgagctattttg
cagttccagaagttgtgtggtttgaagccattagtgggagtggtgaatgaatacatagat
ggaatcctaaacatttttctgtgtgatacatcatcaaatgaggacatctatttccatcat
gtcttgaaaacagagggtcatgctattatatgccgagaaaatgtaccttctaagggtttc
aaaaacctaaaccctttagctttatatactaaatccagtagagagccagatgatgtggtc
ttgacagaactgggttatccttcccagcagcactgtttaactgacaacccagagaaaagt
ccacaggccaaagatagcacgttacataccttgcaggatgttaataatgaaaagtcttta
agtgaccttaaatctgtgccaaaggaactattaaatgattctgaatttagtccattgaaa
acccataagacctgtgagggagatcctaagtgggccatcctggagccaaacaacccgaag
gaagtaaatgaggatgaggttcctagtggaatgccatgcctggagtcagtgaccacaggt
gatgatatttgggatgagaactggttacctctgcgggctagaatgggaaaaggtgatgct
gccccccatctgttcacctcaagccttgttggaaagaaacagtactcattgtgtgaagaa
atgccacagaaggactggtgtttttctacatctgaagatgtatgggatggttcagggcaa
catgcaggccttgtgagtggaatgaatgtagaaattcaaaaagcagaagggctgagtgct
caagaaaaaaagtctggtacagccagaattgaaatggatcctttggattcttccacactg
cctaaactggaggaactctacatctctcttaccccatcacagctatcaacagaagggagc
cagtttgaacctagacacattcagactcaaccaaagtacagtcagctgtccacacagttg
tccaattcaactcctgctgtggatgagtctccagaaaaattctctccgtctgtggagagc
tctccaggaagcataaagaatgaagatttttctagtagtgatgctgtcactttgttcaag
gacaagagtcaagggggcatagatcagctgtctttgattttgtcccccacgcaccagatt
tctcagaagctctacattcctcgaagtacagccactgctgccttaggagctgctgcccgg
ctagctacatccacaagcctcctgcactggtacccgagtatgaaagggtggaagcatgag
ggacagggggaggaaggggctgaagagaaatag
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