Perognathus longimembris pacificus (Pacific pocket mouse): 125359480
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Entry
125359480 CDS
T08928
Name
(RefSeq) receptor-type tyrosine-protein phosphatase V-like
KO
K18036
receptor-type tyrosine-protein phosphatase V [EC:
3.1.3.48
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
plop01009
]
125359480
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
125359480
Protein phosphatases and associated proteins [BR:
plop01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
125359480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
PTP_tm
Tc-R-P
PTP-SAK
Y_phosphatase3
PTP-NADK
DSPc
PTPlike_phytase
Y_phosphatase2
Motif
Other DBs
NCBI-GeneID:
125359480
NCBI-ProteinID:
XP_048213201
LinkDB
All DBs
Position
11:complement(60461763..60483078)
Genome browser
AA seq
1706 aa
AA seq
DB search
MGPPALLAVLLWLQGVLAVEDACHSLGGSRDLEGQGPPPSVSVSNQRTPTSLFVNWTAAE
PGGLGHALCLLRLSPLGSPEGQPLQVHTKASSFEFHNLVPGSRYQLQVTVSRPCGKNATV
TLTTRTAPSTVQELQLHSPGSPTGLEASWGEAPGERDGYQLLLYHQESQTLAQNISVSPG
NLSYRFDNLSPGSQYVLEVITWAGDLQAKTSVRQWTDPMPPDYLMLSALGTSALHASWNR
SEGAARLHLVLTDHLGSSNLTAVVSRGVSNHTFLHLTPGTRYELRLSAAAGPHWATGPNA
TEWTYPSPPLDLVLTPVPPELQASWKAGPGAWDGYLLRLSGPVERNISLGPEVHSAMIPG
PLPTGHYALELRVLAGLHHAYAQASAWLADPAAQPRQGSGAKLQLQGLKATREPGRRALL
YADGAPGLLGNISVPSGATQVTFYELVPGARYRVDIASFSGVITQSLAGHTSPLAPRSLE
VISREHPSELTIGWASAPGQREGYKVAWHQDGSQRSPNSLVDAGPDHSRLTLRDLVPGSC
YTVSVWAWAGDLHSSIQRMQACTRPAPVTNLSLSVASEPPALRASWSPPPGGRDGFRLRI
YNLRSLALEKEETLVPEARNFSWAQLAPGSEFLVQLGTLRGLDESSSANATVWTPPLAPP
EIRVTSEGPTQLRASWGHASGGRDRYQLTLFQEGTPVATSSVGPEADSTSFSALTPGTKY
EVELAAQAGLLRTAAANVSGWTPPRVPSELLVSVQAGSAVVSLAWASGPLGRGTCRVQLS
EDGHPIREEALALGQAHLVLRGLTPGCSLGLSVLCQAGPLRASTRPVVLPVEPGPVEDVQ
CRAETTRLALRWSMPPGHVGTCLVVAERLEAGGGAHLVLQANTSQDAFLLPDLAPATPYR
LSLTVLGRNGLWSRAVSLVCSTSAQAWRPPELAAAPRLELEAGLGVTITRGMFGKDDGQI
QWYGVLATNNMSLPQPPREAFNHTWFDHYYGGQDCYLAILLPNPFFPAPWAAPTTSWMVP
MGTEDCGRTREICNGPLKLGFQYRFSVAAFTRLGSPETIVSFSAFSEPRASVSSAAVPLA
GVVGTAAGVVLTAGAVMGLLCWWRQKGQGAEKDGFSHELTPHSLRWTHRPIPAHSFRQSY
EAKSAHANQAFFQEFEELKEVGREQSRLEAERPANAWKNRYPHVLPYDHSRVRLTPLAGD
PHSDYINASFIPGYAHPQEFIATQGPLKKTLVDFWRLVWEQQVPIIVMLTVGMENGRVLC
EHYWPADPTPVTLGHLTIHLLAEEREEEWTVREFQLRHGAQRRQQRVKQLQFTTWPDHST
PEAPSSLLAFVQLVRELARAAPARGPILVHCSAGVGRTGTFIALLRLLRQLEDEQTVDVF
NTVYTLRLHRPFMIQTPSQYIFLHSCLLNEILHEPSGTLSPSPRSGPISVTNFAQACAKR
AANANSGFLKEYELLLQAIKDDTGSWAPPPGHAQDSSVCYDGAQAQLSLERESPTEVVTE
AWLFPGGPSGRDHVVLTGPAGPEELWELVWEHGAHVLVSLYPLDTQEKPQEFWPTEMQPV
VTDTVTVHRMAESNIVGWPCTVFRVTHGASGAERQVQHLQFQFWESGHELPAATLLPFLA
AVGHCCSQGKSRKPGTLLSHASKGTAHLGIFLAMEQLLQQAGSECTVDVFNVALQQSQAC
GLMTPTLEQYIYLYNCLNSALVDGLP
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccagcgctgctggctgtcctcctctggctccagggagtgttggctgtggaa
gatgcatgccactccctgggagggagccgggacctggagggccaagggccacctccaagc
gtgagcgtgagcaaccagaggactcccaccagcctgtttgtgaactggacagctgctgag
cccggtggccttggccatgccctctgcctcctgcgcctcagcccccttggctctcctgaa
gggcagccgctccaagtccacaccaaggcatccagcttcgagttccacaacttggtgccg
ggaagtcggtaccagctacaagtgaccgtctcgcgcccctgtgggaagaatgccactgtc
actctcaccacccgtactgccccgtcaacggtccaagaactgcagctccacagccccggg
agccctaccggtctggaggcctcgtggggtgaagccccgggggaacgggacggctaccag
cttctcctgtaccaccaagagtcccagaccctggcacagaatatctccgtgtccccgggc
aacctgtcttaccgctttgacaacctctcgccgggtagccagtatgtattggaggttatc
acgtgggcaggtgatctccaagcaaagaccagcgtccgccagtggacggaccccatgcct
ccagactacctgatgctgagtgccctgggtaccagcgctctgcacgcctcctggaaccgc
tcggaaggggccgcgaggctccacctcgtgctcacagaccacctgggcagctccaacctg
accgcggtagtcagccgaggggtctcaaaccacaccttcctgcacctgactccgggcacc
cgctacgagctgaggcttagtgctgccgctgggccccactgggcgacggggcccaatgcc
accgaatggacctacccctctcccccactggacctggtgctgactccagtgccccctgag
ctccaggccagctggaaggcagggccgggagcatgggatggctacttactgaggctgagt
ggaccagtggagaggaacatctctctgggccctgaggtccacagcgccatgatcccggga
cctctgccaactggacactatgccctggagctgagggttctggctgggctgcatcacgcc
tacgctcaggccagtgcctggctggctgatcctgcagcccagcctaggcagggcagtggc
gccaagctgcagctgcaaggattgaaggccacgagggagcctgggcggcgggcgctgctc
tacgcagatggtgccccaggcctcctaggaaatatctctgtgccctctggtgccacccaa
gtcaccttctatgagctggtgcctggggcccgctaccgggtggacattgcctcgttttcc
ggagtcatcactcagagccttgcaggccacaccagtcccctggcaccccggtccctggag
gtgatcagcagggaacacccctctgagctgaccattggctgggcctcagccccagggcag
cgagaaggctataaggttgcctggcaccaggatggcagccagaggtcaccgaacagcctt
gttgatgcgggccccgaccattccaggctgacgctgagggacctggtgcctggttcctgc
tacaccgtgtcagtgtgggcctgggctggggacctccactctagcatccaaaggatgcag
gcctgcacccgccctgctcctgtcaccaacctgagcctgagcgttgcctctgagcctccc
gctctgagggcttcctggagccccccaccagggggcagggatggtttccggctacggatt
tacaatctgagatccctggctctggaaaaagaagagaccctggtgcctgaggcccggaat
ttctcctgggctcagttggccccaggctctgagttcctggtgcagctgggaacccttcga
gggttggatgagagcagcagtgccaacgcaacagtttggacgcctcccctggcccctcct
gagatacgcgtgaccagcgaaggccccacgcagctccgagcatcctggggccatgcttct
gggggccgagaccggtaccagctgaccctattccaggaaggcaccccggtagccaccagc
agtgtggggcccgaggcggacagcacaagcttctcagcgctgaccccgggcacaaagtat
gaggtggagctggcggcacaggctgggctcctccgcactgcagctgccaacgtctccggc
tggacccccccgcgcgtgcccagtgagttgctggtgtcggtgcaggcgggcagcgctgtg
gtcagcctggcctgggccagcggccccctggggcggggcacgtgccgtgttcagctctcc
gaggatgggcaccccatccgggaggaggccctggctcttggtcaagcccacctagtgctg
aggggcctcacacctggatgtagcctcgggctctccgtgctgtgccaagccgggcctctc
cgggcttccactcgccctgtggttctgcctgtcgagcctggccccgtggaggacgtgcag
tgccgggcggagaccacccgcctggccctgcgctggtccatgcctcccgggcacgtgggc
acctgtctggtggtggccgaacggctggaggcgggaggaggtgcccacctcgtgctccag
gccaacacctcccaggatgcttttctcctgcccgacctggcgccggccacgccctatcgc
ctcagcctcaccgtgctgggccggaacggcctgtggagccgggcagtgagcctggtgtgc
agcacttctgctcaggcctggcgtcccccagagctggctgcagccccccggctggagctg
gaggcagggctgggggtgacgatcacacgaggcatgtttggcaaggatgatgggcagatc
cagtggtatggcgtccttgccaccaacaacatgtcactgcctcagcccccgcgggaagcc
ttcaaccacacgtggttcgaccactactacgggggacaggactgctacctggccatcctg
ctccccaaccccttcttcccagcaccctgggccgcaccaacaacatcctggatggtgccc
atgggcacggaggactgcggccgtacccgggagatatgcaacgggccgctgaagctgggg
ttccagtacaggttcagcgtggcggccttcaccaggctcggctctccggagaccatcgtg
tctttctcagccttctcagagccccgggccagcgtgtcctcagccgcggtgcccctggca
ggcgtggtgggcacggcagcgggcgttgtcctcaccgccggcgccgtgatgggcttgctg
tgctggtggaggcagaaggggcagggggcagagaaggatggcttttcccacgagctgacg
ccccacagcctgaggtggacccaccggcccatccctgctcacagcttccggcagagctac
gaggccaagagcgctcatgccaaccaggctttcttccaggagtttgaggagctgaaagag
gtgggccgggagcagagccggctggaggcagagcggccggccaacgcctggaagaaccgc
tacccacacgtgctgccctatgaccactccagggtcaggctgacgccgctggccggagac
ccccattcggactacatcaacgccagcttcatccccggctacgcccacccgcaggaattc
atcgccacccaggggcctctcaagaaaacgctggtggacttctggcggctggtgtgggag
cagcaggtccccatcatcgtcatgctcaccgtgggcatggagaacgggcgggtgctgtgt
gagcattactggccggctgaccccaccccggtcaccctggggcacctcaccatccacctc
ctggccgaggagcgcgaggaggagtggaccgtgagggagttccagctgcggcacggtgcc
cagcgcagacagcagagggtgaagcagctccagttcaccacctggcccgaccacagcacc
cccgaggcccccagctccctgctcgccttcgtgcagctggtacgggagctggcgagggcc
gcgccggccagggggcccatcctggtgcactgcagtgcgggcgtgggccggacgggcacc
ttcatcgccctcctgcggctgctgaggcagctggaggacgagcagacggtggacgtgttc
aacaccgtgtacacgctccggctgcaccggcccttcatgatccagaccccaagccagtac
atcttcctgcacagctgcctgctgaacgagatcctccacgagccctcgggcaccttaagt
ccttcccccaggtctgggcccatctctgtgacgaactttgcacaggcgtgtgccaagagg
gcagccaatgccaactctggcttcctgaaggagtacgagctgctgctgcaggccatcaag
gacgacaccggctcttgggcgccccctcctggccacgcgcaggacagctctgtctgctac
gatggtgctcaggcacagctttctctggagcgggagagccccacggaggtcgtgacggaa
gcctggctcttccctggcgggccttctggccgggaccacgtggtgctgaccggcccggcg
gggccagaggagctctgggagctggtgtgggagcacggagcccatgtgctggtctccttg
tacccgctggatactcaggagaagccacaggagttctggccgacggagatgcagccagtg
gtcacagacacggtgaccgtgcaccggatggctgaaagcaacatagtgggctggccctgt
acggtcttccgggtcacacatggcgcgagcggagcggagaggcaggtccagcacctgcag
tttcagttctgggaatccggccacgagctgcctgctgccaccttgctgcctttcctagcc
gcggtgggccattgctgctcccagggcaagagccgaaagccgggcacgctgctcagccac
gccagcaagggcaccgcccatctgggcatcttcctggccatggagcagctgctgcagcag
gcagggtctgagtgcaccgtggatgtcttcaacgtggccctgcagcagtcacaggcctgt
ggcctcatgactccaacactggagcagtacatctacctctacaactgtctgaacagcgca
ctggtggacgggctgccctga
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integrated database retrieval system
