Perognathus longimembris pacificus (Pacific pocket mouse): 125359512
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Entry
125359512 CDS
T08928
Symbol
Lamc2
Name
(RefSeq) laminin subunit gamma-2
KO
K06246
laminin, gamma 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04151
PI3K-Akt signaling pathway
plop04382
Cornified envelope formation
plop04510
Focal adhesion
plop04512
ECM-receptor interaction
plop05145
Toxoplasmosis
plop05146
Amoebiasis
plop05165
Human papillomavirus infection
plop05200
Pathways in cancer
plop05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
125359512 (Lamc2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125359512 (Lamc2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125359512 (Lamc2)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125359512 (Lamc2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125359512 (Lamc2)
09162 Cancer: specific types
05222 Small cell lung cancer
125359512 (Lamc2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
125359512 (Lamc2)
09174 Infectious disease: parasitic
05146 Amoebiasis
125359512 (Lamc2)
05145 Toxoplasmosis
125359512 (Lamc2)
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_B
EGF_LMN_ATRN
DUF3577
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
125359512
NCBI-ProteinID:
XP_048213250
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Position
11:complement(19509882..19576530)
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AA seq
1191 aa
AA seq
DB search
MPALWLCCYLCVSLLLPAARATSRREVCDCNGKSKQCIFEQELHRQTGNGFRCLNCKDNT
DGVHCERCREGFYRHRDRDHCLPCNCHAKGSLSARCDNSGQCSCKPGVTGEKCDRCLPGF
HTLTDAGCTPDPSLLNLKCDCDPAGIVGPCDSGRCVCKPAVTGERCDRCRPGYYHLDRGN
PDGCTQCFCYGHSDSCHGSVDFSVHKITSDFREGVDGWKAIQKNRSPAKLHWSHRHRDVF
SSARRSDPVYFVAPAKFLGNQQVSYGQTLSFDYRVDRGGRHPSSHDVILEGAGLQIKAPL
MPLGKTLPCGLTKTYTFRLSEHPSSNWSPQLSYFEYRRLLRNLTALRIRATYGEYSTGYL
DNVTLISARPVSGAPAPWVEHCVCPVGYKGQFCQDCASGYRRDSARLGPFGSCIPCNCQG
GGACDPDTGDCYSGDESPDIECADCPIGFYNDPHDPRSCKPCPCHNGFSCSVMPETEEVV
CSNCPPGVTGARCELCADGYFGDPFGERGPVRPCQPCQCNHNVDPSVSGNCDRLTGRCLK
CIHNTAGFYCDQCKEGYFGDPLAPNPADKCRACNCNPMGAEPGECRSDGSCVCKPGFGGL
NCEHAALTSCPACYNEVKMQMGAFMQQLQSLEALVSQAQGRGGSVPNAELEGRMQQAEQA
LQDVLREAQIAEDARRSLSLQVAKVRGQENSYQNRLEDLKMAAERIQALSSQHQNQVQDT
RRLMAEMRLSLAESEASLRNTNIPPSEHYVGPNGFKSLAQEATNLAESHADSASNMEQLA
RETEDFSKQALALAHQAVSGGGGSGILDSSVVQGLMGKLETTRSQALQLSREATQADIEA
DQSYQQSLRLQDAVSQLQALTDPSFQVEATRIKQKADSLSSLVTRHVDEFKHVQRNLGNW
EKETQQLLQSGKDGRQKADQLLSRANLAKSRAQEALSMGNATFYEVENILKNLREFDLQV
ENRKAEAEEAMKRLSSISQKVADASDKTEQAEAALGSAAADAQRAQSAAREALEISSEIE
QEIGSLNLEANVTADGALAMEKGLASLKSDIREVEGELTRKELEFDADKDAVQMVITEAQ
RVETRAKNAGLTIQDTLEALDGILHLIDQPGSVNEEGLVLLENELFQAKAQIKTQLRPLM
SALEERSRRQRGQLHSLRTSIDDILADVKNLENIRDNLPPGCYNTQALEQQ
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccctgtggctctgctgctacctctgcgtctcgctcctcctgcctgcggcccgg
gccacctccaggagggaagtctgtgactgcaatgggaaatccaagcaatgcatctttgag
caggagcttcaccgacagacaggcaatgggttccgctgcctcaactgcaaggacaatacg
gatggcgttcactgtgagaggtgcagggagggcttctaccgacaccgggacagagaccac
tgcctgccctgcaactgtcatgccaaaggttctctcagtgctcgatgtgacaactctgga
cagtgcagctgcaagccaggtgtgacaggagagaaatgtgatcggtgtctaccaggcttc
cacacactcactgatgccggatgcactccagacccaagccttctaaatctcaagtgtgac
tgtgacccagctggcattgtggggccctgtgattctggccgctgtgtctgcaagccagct
gtcactggagagcgttgtgacaggtgtcggccaggttattaccatctggacagaggaaat
cctgatggctgtacccagtgtttctgctatgggcattcagacagctgccacggctctgtg
gacttcagtgtccataagatcacctctgacttccgagaaggtgttgatggatggaaggct
atccagaaaaataggtctcctgcaaagcttcattggtcgcatcgccatcgggatgtattt
agttcagcccgacgctcagatcctgtttattttgttgctccagccaaatttcttggtaat
cagcaggtgagctacgggcaaaccctgtcttttgactaccgtgtggacaggggtggcagg
catccctcctctcatgatgtgatcttggaaggggcaggcctacagatcaaagctcctctg
atgcctcttggcaagacgctaccttgtggactcaccaagacgtacacgttcaggttaagt
gaacatccaagcagcaactggagccctcagctgagctatttcgagtaccgacgattgcta
cggaacctcaccgccctccggatccgggccacttacggagagtacagtactggctacttg
gacaacgtgaccctcatttcagcccgccctgtctctggagccccagcaccttgggttgaa
cattgtgtatgtcctgttggatacaagggacaattttgccaagattgtgcttctggctac
agaagagattcagcaaggctagggccttttggtagctgcattccctgcaactgccaaggg
ggaggggcctgtgatccagacacaggagattgttattcgggggatgagagccctgacatc
gagtgtgccgactgtcccattggtttctacaatgatccacatgacccacgcagctgcaag
ccatgcccttgtcacaatggcttcagctgctcagtgatgccagagacagaggaggtggtg
tgcagcaactgccccccaggggtcactggagctcgctgtgaactctgtgctgatggctac
tttggggatcccttcggagaacgtggcccagtgaggccttgtcagccctgtcaatgcaat
cacaatgtggaccccagtgtatctgggaactgtgaccggctgacaggcaggtgtttgaaa
tgcatccacaacacagctggcttctactgcgaccagtgcaaagagggttactttggggat
ccattggcacccaatccagcagacaagtgtcgagcttgcaactgcaaccccatgggtgca
gagcctggtgagtgtcgcagcgatggcagctgtgtttgcaagccagggtttggtggactc
aactgtgagcatgcggcactgaccagctgtcctgcttgctataatgaagtaaagatgcag
atgggtgcgtttatgcagcagctgcagagcctggaggccctggtgtcacaggctcagggc
agaggcggatcggtgcccaatgcagagctggaagggagaatgcagcaggcggagcaggcc
cttcaggacgttctgagagaagcccagattgcagaagatgctaggagatccctaagtctc
caggtggccaaggtgaggggtcaggagaacagctaccagaaccgcctggaggacctcaaa
atggctgctgaaaggattcaggccttgagcagccagcaccagaaccaagttcaggacacc
cgccggcttatggctgagatgcgcttgagcctggcggaaagtgaagcatccctgcgcaac
accaacattcctccctccgagcactatgtggggccaaatggctttaaaagtctggctcag
gaggccacaaatttggcagaaagccatgctgactcagccagtaacatggaacaactagca
agggaaactgaggacttttctaaacaagctctagccctggcccaccaggctgtgagtgga
gggggcggaagtggcattttggacagctccgtggtacaaggacttatgggaaaattagag
accacgaggtcccaggccctgcagctttcacgggaggctactcaggccgacattgaggcg
gatcaatcttaccagcagagtctccgccttcaggacgcagtgtctcagcttcaggcactc
actgatccgtcttttcaggtagaagcaacgaggatcaaacagaaagctgactctctctcg
agcctggtaaccaggcatgtggatgagttcaagcatgtgcagagaaatctgggaaactgg
gaaaaagaaacgcagcagctcttgcagagtggaaaggatgggcgtcagaaagcagaccag
ctgctttcccgtgccaaccttgctaaaagcagagcccaagaagcactaagtatgggcaac
gccactttttatgaagttgagaacattctgaagaacctacgagagtttgacctgcaggtt
gaaaacagaaaagcagaagcagaagaggccatgaagagactctcctccattagccagaag
gttgcagacgccagtgacaagactgagcaagccgaagcagccctggggagtgcggctgcc
gacgcccagcgggcgcagagtgcagccagggaggccctggaaatcagcagcgagatagaa
caggagatagggagtctcaacttggaagccaatgtgacagcagatggggccttggctatg
gagaagggactggccagtctgaagagtgacataagggaggtggaaggagagctgacaagg
aaggagctggagtttgatgctgataaagacgcagtgcagatggtgattacagaagcccag
agagttgagaccagagccaagaatgctggactcacaatccaagacacactggaggcattg
gatggtatcctacacctaatagaccagcccggcagtgtgaatgaagaagggttggtgtta
ttggagaatgagctttttcaagccaaggcccagatcaaaacacaactgcggcccttgatg
tcagctttggaagagaggtcccgtcgacagaggggccagctgcattcgctgcggacaagc
attgatgacattctggctgatgtgaagaacctggaaaacattagggacaacctgcccccg
ggctgctacaacacccaggctctcgagcaacagtga
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