Perognathus longimembris pacificus (Pacific pocket mouse): 125359571
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Entry
125359571 CDS
T08928
Symbol
Utp20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125359571 (Utp20)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
125359571 (Utp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
ToxN_toxin
DUF7051
Motif
Other DBs
NCBI-GeneID:
125359571
NCBI-ProteinID:
XP_048213322
LinkDB
All DBs
Position
1:complement(15077296..15172753)
Genome browser
AA seq
2796 aa
AA seq
DB search
MKTKPVSHKTENTHRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQVRNSFAYQPLLDLVVQLARDLQT
DFYPHFEDFFLAITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMNNIYSLYSTLLAH
RKLHIRNFAAESFTFLMRKVSDKNALFNLMLLDLHEHPEKVEGVGQLLFEMCKGVRNMFH
SCTGQALKLILQKLGPVTETETQLPWVLVGETLKNMAKSTVVHIYKEHFATFFDCLQESL
LDLHSKVTKANSCESSEQIKRLLEIYMILVKHGNGSKITKPADVCKVLSQTLATANLSAT
CRKTLLDIISALILGENVSLPETLIKETIEKIFESRFERRLILDFSEVMFSMKQFEELFL
PTFLSYIETCFSVGDTGAKDEALAILAKLILNKAVPPTMGCMVIEKYPLVFSQQTVGSYL
RQKKTRSERTKKQYSVLDHLLTVIQLPPSKDTTYFSQSWATLIVLPHIRPLEKEKVIPLV
ACLIESLFVTIDRGTFGKGSFFVLCQAVNTLLSLEESSELLHLVPVERVKNLVLTFPSEP
SVLLLADLYYQRLSFCGCKGPLSEEALMELFPKLQTNISTGVSKIRLLTIRILNHFDIQL
PVLMEGDGDGLSERQSAFTILRQAELVQATVSDYREKLLHLRKLRHDMVQTALPHGPLQE
VPLRYLLGMLYVNFSALWDPVIELISSHAHEMENKQFWKVYYEHLDKAATRAEKELQKDI
GDEEQSIGDENWEQPQEGHVGALYQQQLALKTDCRERLDHTNFRFLLWRALAKFPERVEP
RSRELSPLFLRFINNEYYPADLQVAPTQDLRRKGRGRTAEETEEEPTVGNDEDLEEEEGS
PEEPSQKKKTRRAAAKQLIAHLQVFSKFSNPRSLYLESKLYELYLQLLLHQDQTVQKIAL
DCILTYRHPHILPYRENLQRLLEDRSFKEEIVHFSISEDNSVVKTAHRADLFPILMRILY
GRMKNKTGSKTQGKSASGTRMAIVLRFLAGTQPEEVQIFLDLLSEPVKHFKNGECHSAVT
QAVEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQILLCMTATVSHILDQR
EKIQLRFINPLKNLRRLGIKMITDIFLDWESYPFKTEEIDAVFHGAVWPQICRLGSESQY
SPTPLLKLISIWSRNSRYFPFLAKQKPGHPECDILTNVFATLSAKNLSDATARIVMDIVD
DLLNLPDFEPTETVSCLLVTGCVYADVTEDTGEPITVGGRLILPHVPAILQYLSKTTISA
EKVKKKKNRAQVSKELGILSKISKFMKDKEQSSLLITLLLPFLHRGNIAQDTEVDILVTV
QNLLQHCRDPTSFLKPLAKLFSVIKNKSSRQLLCTVFQSLSDFESGLEYITDIIQLNAFD
QRHLDDINFDVRFSAFQKITSYIKEMQAVDFNYLIPVMHNCFYNMELGDMSLSDNASICL
MSIIKKLAALNVTEKEYREIIHRALLEKLRKGLKSQTESIQQDYTMILSCLIQTFPNQLE
FKDLVQLTDCHDPEMDFFENMKHIQIHRRARALKKLANQLLEGKVVLSSKSLQNYIMPYA
MTPIFNEKMLKHENITIAATEVIGAICRHLSWPAYVYYLKHFIHVLQSGQINQKLGVSLL
VIVLEAFHFDHKTLEEQMGKIQNEGDTVETVEIQEHEAMELEDLDEEEKEEACKQESDNT
EAQGAPDSADSDETAAKESACVSKPVSFLPRNKEELERVIQTIQGTVTGDILPRLHKCLA
STTKREEEHKLVKSKVVNDEEVVRVPLAFAMVKLMHSLPQEVMEANLPSILLKVCVLLKN
RAQEIRDIARSTLSKIIEDLGVHFLQYVLKELQTTLVRGYQVHVLTFTVHMLLQGLTSKL
QVGDLDPCLDIMIEIFNHELFGALAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQ
VTKLILPLKEILQNTTSLKLARKVHETLRRIIAGLIVNPEMMAESILLLSYGLISENLPL
LTEKEKKPAVPAPDPRLPPQSCLLLPPTPVRGGPKAAVSRKTNMHIFIESGLRLLHLSLK
TSKISSSSEHVLEMLDPFVSLLIDCLDSMDVKVITGALQCLIWILRFPLPSIETKAGQLT
KHLFILLKNYAKHGAAKGQNFHLVVNCFKCVTIIIKKVKSYQITEKQLQVLLAYAEEDIY
DTSRQATAFGLLKAILSRRLLVPEIDDVMRKVSNLAISAQNEPTRVQCRQVFLKYILDYP
LGEKLRPNLEFILAQLNYEHETGRESALEMIAYLFVTFPQGLLHENCGMFFIPLCLMMVN
DDSTTCKKMVAMAIKSLLSKISPEKRDWLFGMVTTWFEAKKKLNKQLAALICGLFVESEG
VDFERRLGNLLPVIEREIDPENFNDIIEETEEKAADRLLFSILTLISKLVKECNIIQLSK
PSETLNKIWSHVHTHLRHPHSWVWLTAAQIFGLLFASCQPEELIQKWNTKKRKKKLREPV
AVRFLTDDLDQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVIYLLEPHSEDKQG
EIKDLVQQEALGDSVSGDALGENEAGASGKAESHREKEEEKEEPGRPTTLLWLVQKLSRM
AKLEAAYSPRNLLKRTCIFKFLGAVAVDLGVDRVKPYLPVIIAPLYRELNSTYSEQDPLL
KNLSQEIIELLKKLVGLENFSLAFASVQKQANQKRALRKKRKALEFVTNPDIAAKKKLKK
HKNKSEAKKRKIEFLRPGYKAKRQKTHSLKDLAIVE
NT seq
8391 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaagcctgtttcccataagacggagaacacccaccggtttcttacatttgct
gagcgactcgggaatgtgaatatcgatattattcaccgcattgatagaactgcaagctat
gatgaggaggttgaaacctacttctttgagggtctgttgaaatggagagaattgaatcta
acggaacatttcggaaaattttacaaagaagttattgacaaatgccaatcattcaatcag
ttggtttatcatcagaatgagatagttcaaagtttgaagactcacctgcaagttaggaac
agttttgcctaccagccccttttagatttggttgtacagttggcacgagatctgcagacg
gatttctatccacactttgaggacttttttctggctatcacctccatcctggagacgcag
gacacagagctgttagaatgggccttcacttcgctgtcctatctttacaagtacctgtgg
agactgatggtgaaggacatgaacaatatatacagcctgtacagtacactcttggctcat
agaaaactacatataagaaattttgctgccgaaagctttactttcttaatgagaaaggtc
tctgataaaaatgcacttttcaacttaatgcttcttgatcttcatgaacatccagaaaag
gtggaaggagttggacagttactctttgaaatgtgcaaaggagttagaaacatgtttcat
tcctgtacaggacaggcactgaagctaattttgcaaaagctaggaccagttactgaaaca
gaaactcaactaccatgggtattagttggagaaacactcaaaaacatggctaaatctact
gtagtccacatctataaggaacactttgctacattttttgactgtttgcaagaatcactc
ttggatctacatagcaaagtgacaaaagcaaactcttgtgaaagttctgaacagattaaa
agattattagaaatatatatgatacttgtaaaacatggaaatggatcaaaaataaccaaa
cctgctgatgtttgtaaggtattgtctcaaacattagcaacagcaaatctttctgcaaca
tgccgcaagacactcttggatataatttctgctttgatccttggtgaaaatgtttctttg
ccagagaccctcatcaaagaaaccatagaaaaaattttcgagagcagatttgaaagacgt
ttgattttggatttctctgaagttatgttttctatgaagcaatttgaagagctttttcta
ccaacctttctctcatacattgagacttgcttctcagttggtgacactggggcgaaagat
gaagcactggctattttggccaagctcattctcaacaaagcagtacctcccaccatgggc
tgcatggtgattgagaagtatcctctggtgttctcacagcagacagtggggtcctattta
aggcaaaagaagactaggtctgaaagaacaaagaaacagtactcagtactggaccatctc
ttaactgtaattcagctcccccccagtaaagatacgacttacttctcacagtcttgggca
actcttatagtattacctcacattagaccacttgagaaggagaaggtgatacctctagtg
gcatgtctcatagagtcgctcttcgtgactattgacagagggacctttgggaaaggaagc
ttctttgttctttgtcaagctgtaaatactctgctgagtttggaagagtcttctgaacta
cttcacttggttcctgtggaacgtgtaaagaatttggtattaacatttccttcagaacca
tcggtgctactgttggctgatctctattatcagagattatccttctgtggctgtaaagga
ccactttctgaggaagctttaatggaattatttcctaaattacaaacaaacatttcaacc
ggagtatccaagattcggcttttgacaataaggatcttgaaccattttgacattcagctt
ccggtattgatggagggtgatggtgacggtctgtcggagcgccagtcagccttcactata
ttacgccaggcagaacttgttcaagcaactgtgagtgattacagggagaagctcctgcac
ttgcggaaactgaggcatgatatggtgcagactgctcttcctcatggacccttacaggag
gtgccacttcgttatttgttaggcatgttatatgtcaacttcagtgctctgtgggatcct
gttattgaactcataagttctcatgcccatgaaatggaaaataagcagttttggaaagtc
tactatgaacatctagataaagcagctacacgtgctgaaaaagaactgcaaaaggatatc
ggagatgaggaacagtccattggggatgaaaactgggagcagccccaggaagggcatgtt
ggagctctttaccagcagcagttagcattgaaaactgactgtcgggagagactggaccac
accaactttcgatttttgctttggcgagctctggcaaaattcccagagagagtagaaccg
cggtccagggagctttccccactcttcttgagatttattaacaacgagtattaccccgca
gatctgcaagttgctccaacccaggatcttcggagaaaaggcagagggaggacagcagaa
gaaactgaagaggaacctactgtggggaatgatgaggatttggaggaggaggaagggtct
ccagaagaaccctcacagaagaaaaagacaagaagagctgcagcaaaacaattaattgct
catttgcaagttttctctaaattttcaaacccacggtccttatacctggaatccaaatta
tatgagttatatcttcaactattactacaccaagatcaaacagtacaaaaaatagccctg
gattgcatattgacatatagacatcctcatatcctcccttacagggagaacttacaaagg
ctgcttgaagatagaagctttaaagaagagatagttcattttagcatttcagaagataat
tctgtggtgaaaacagctcatcgagccgatttatttcctattctgatgagaattttgtat
ggaagaatgaagaataagactggcagtaaaacacaggggaaatctgcttcaggcacacgc
atggccattgttctgcggttcttggctgggacccaacctgaggaggtccagatattctta
gacctgttgtctgaacctgtgaagcacttcaagaatggagagtgccattctgcagttact
caagccgtggaagatttggatttgtctaaagttcttcctttgggtcgtcagcatggcatc
ttaaatagtctagaaatagtgttgaagaacattagtcatctgatcagtgcatacttacca
aagattttacagatactactctgtatgaccgctactgtatcacacatccttgaccaacgg
gaaaagatacagctgaggtttattaacccattaaaaaatttaagacgtcttggaatcaaa
atgataactgatatatttttggattgggagtcctatccattcaaaacagaagaaattgat
gctgtgtttcacggtgcagtttggccccagatctgcaggcttggatctgagagtcaatat
tcacctactcctctgctgaaattaattagtatctggagcagaaattcaaggtatttccct
tttctggctaaacagaaacctggacaccctgaatgtgatatcctgaccaatgtgtttgca
actctctcagcaaagaacctctctgatgccacagccagaattgtgatggacatagttgat
gaccttcttaaccttccagattttgagcccacagaaacagtgtcatgcttgctggtcact
ggatgtgtttatgctgacgtcacagaggatacaggtgagcctatcactgtaggaggaaga
ttaattctacctcatgtgcctgcaattcttcagtatctcagcaaaaccactataagtgca
gaaaaggtgaagaagaaaaagaacagggcccaagttagtaaggaacttggcattctctca
aagatcagcaagtttatgaaagacaaagaacagagttctctgctcattacacttctcctc
ccattcctccaccgtggcaatattgctcaggatacagaggttgatattctggtgacagtg
caaaacctgttacagcactgtcgggaccctacaagcttcctcaagcctttggccaaactc
ttttcagttattaaaaacaaatcgtcaaggcagttgctctgtacagttttccagagtctt
tcagattttgaaagtggactagaatatattacagatattatccagcttaatgcctttgac
caaagacaccttgatgatatcaactttgatgttcgcttctcagcattccaaaaaattacc
tcttatattaaggaaatgcaagccgtggattttaactatctaattccagttatgcataat
tgtttctataatatggagttaggagatatgtctttaagtgataatgccagcatatgcttg
atgagtatcatcaaaaaactagctgccttgaatgtcacagagaaagaatacagagaaatc
attcaccgagccctcctggagaaactgaggaaagggctgaagagccagacagagagtatt
cagcaggattataccatgatactttcctgtttaattcaaactttcccaaatcagctggag
tttaaagacttggtacaacttactgactgtcacgatccagaaatggacttctttgagaac
atgaagcatattcagatccacagaagagcaagagccttgaagaaactggcaaatcagctc
ctagaaggcaaagttgtgctttcttctaaatctcttcagaattatatcatgccttatgcc
atgactccaatttttaatgagaaaatgctcaagcatgaaaatataacaattgctgccaca
gaggttattggggctatttgcagacatctctcctggccagcatatgtatattacttgaaa
catttcattcatgtcctacagtcagggcaaattaatcaaaagttgggtgtcagtttgcta
gtaatagtattagaagcattccattttgaccacaaaactcttgaagaacaaatgggaaaa
attcagaatgaaggagacacagttgaaacggtggagatacaggaacatgaagctatggaa
ctggaagacttggatgaggaagaaaaggaagaagcatgtaagcaagagtcagataacaca
gaggcgcagggagcccctgattcagctgattctgatgagacagcggctaaggagtctgca
tgtgtctcgaagcctgtctctttccttccccggaataaggaagaactggagagagtaatc
cagactatccaaggaactgtcacgggggacatcctcccaaggctgcacaagtgccttgca
tccacgacaaaaagggaagaagagcacaagctggtgaagtcaaaggtcgtgaatgatgag
gaagtggtccgagttcctttagcttttgccatggtgaagctgatgcattctctgcctcaa
gaggtgatggaggcaaatctgccaagcattttgttgaaagtgtgtgtcctcctaaagaac
agagcacaggaaatcagagacattgcccgcagcactctctccaaaataatagaggatttg
ggtgtgcacttcctacagtatgttttaaaagaactacaaactactcttgtccgtggatat
caggtccatgtgctaacgttcactgttcacatgttgctgcaaggcctcaccagcaagctt
caagttggggatttggatccttgtttagatataatgattgagatctttaaccatgaactg
tttggtgctcttgcggaagagaaagaagtgaagcagatcctctccaaagttatggaggct
cgaagaagcaagagttacgactcttatgaaattctgggcaagtttgtaggaaaagatcag
gttacaaaacttattcttccattaaaagagatcttacaaaataccacaagtttaaagctg
gcccggaaagttcatgaaaccttacgccgaattatagcaggattaattgtaaatccagaa
atgatggcagaatccattctattgctcagttatggtttgatcagtgagaacctacccctg
ttaacagaaaaagaaaaaaaaccagcagtccctgcacctgatccacgtttgccaccccag
agctgccttctgctccccccaactccagtccgaggtggaccaaaagctgctgtgagcagg
aaaaccaatatgcacatatttattgaatctgggcttcggctgctgcatctgagtctgaag
acttccaagatcagttcttcaagtgagcatgtgctggaaatgttggacccttttgtgtct
ctgctcatagactgcctggattccatggatgtgaaggtgatcacaggtgctttgcagtgc
ctgatctggatcttgaggttccctttgccttcaatagaaacaaaagcagggcagctgaca
aaacaccttttcattttgctgaagaactatgcaaaacatggggctgccaaaggccagaac
ttccacttggtagtaaactgcttcaagtgcgtgaccatcatcataaagaaagtcaagtct
taccagataactgaaaaacagctccaagttctgctggcatatgctgaggaggatatttat
gatacttcaagacaagccactgcatttggtcttctgaaggctattttatcgagaagatta
ttggtcccagaaatcgatgatgtcatgcggaaagtatccaacttggcaatttctgcacaa
aatgaacctaccagagtccagtgcagacaggtttttctgaaatatattcttgactatccc
cttggtgaaaaattgagaccaaacttggaattcatactcgctcaactgaattatgaacat
gagacgggaagagagtccgccttggagatgattgcctacctctttgtcacatttcctcag
gggctgctgcatgagaactgtggaatgttcttcatccctctttgtctaatgatggtgaat
gatgactctaccacatgcaaaaagatggtggccatggcaatcaaatctttactcagtaag
atcagccctgaaaagagagattggctgtttggtatggtgaccacctggtttgaggcaaag
aagaaattaaataaacagcttgctgccttgatctgtggcttgtttgtggaaagtgaaggg
gtcgattttgagagaaggcttggaaatcttcttcctgtgattgaaagggaaattgatcct
gaaaacttcaatgatatcatagaggagaccgaagagaaagctgcggaccgcctgctgttc
agcatcctcacactcatcagtaaacttgtcaaggagtgtaatattattcagctttccaag
ccttcggagactttgaataaaatctggagtcatgtgcacacgcacctgagacatcctcac
agctgggtgtggctcacagcagcccagatttttggactactctttgcctcttgccaacct
gaagagcttattcagaaatggaataccaaaaagaggaaaaagaaactcagagagcccgta
gcagtcaggttcctaacagatgatctagaccaaaagatgaaaagtatctctcttgcctct
tgccaccagttgcattccaaattcttagatcagtctcttggagagcaggttgtgaaaaat
ttgttatttgtagcaaaagtcatatatttactagaaccacattctgaagataagcaaggt
gaaataaaagacttggtacagcaggaagctttaggagacagtgtgtccggggatgcatta
ggagaaaatgaggccggagcaagtggaaaggcggagtcccacagagagaaggaagaggag
aaggaagagccgggcaggcccaccacgctgctgtggctggtccagaagttgtctcggatg
gcgaaactggaagctgcttattcacccagaaacctcctaaagagaacatgcatcttcaag
ttccttggggctgttgcagtggatcttggagtggacagggtaaagccttatctcccagtg
atcattgcgcctctgtatcgagaactgaacagcacctattcagagcaagatcctttgctg
aagaatctttcccaggaaattatagaactactcaaaaagctggttgggcttgagaacttc
tcattagcctttgcctcggtacagaaacaggctaatcagaagagggcactccggaaaaag
aggaaggctctggagtttgtgactaatcctgatattgctgccaagaaaaaattgaaaaaa
cataaaaataaaagtgaagcaaagaagaggaagatagagttcctgcgtccaggctataag
gccaagagacaaaagactcacagcctgaaagatttagccatagtggagtaa
DBGET
integrated database retrieval system
