Perognathus longimembris pacificus (Pacific pocket mouse): 125359612
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Entry
125359612 CDS
T08928
Symbol
Lingo4
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4 isoform X1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359612 (Lingo4)
Membrane trafficking [BR:
plop04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
125359612 (Lingo4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_1
Ig_3
LRR_14
ig
V-set
LRR_Zer-1
LRR_EndoS
LRRNT
Ig_2
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
125359612
NCBI-ProteinID:
XP_048213374
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All DBs
Position
11:42872972..42877543
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AA seq
628 aa
AA seq
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MLPSGFSGKPGKSRDHYHLKPLSQMVHVIIFPGLGMDATPVPKQAWPPWHPLLLLLLLPG
GNTSTCPAVCDCTSQPRAVICAHRRLEAVPGGLPLDTELLDLSGNRLWGLQRGMLSRLGL
LQELDLSHNQLSTLEPGAFHGLHSLLTLRLQGNRLRIMGPGIFSGLSALTLLDLRLNQIV
LFLDGAFGELGSLQQLEVGDNHLVFVAPGAFAGLTELSTLTLERCNLSTVPGLALARLPA
LVALRLRELDIEKLPAGALRGLGQLKELEIHHWPSLEVLDPGSLIGLNLSSLAITRCNLS
SVPFQALHHLSFLRVLDLSQNPISAIPARRLSPLVRLQELRLSGACLTSIAAQAFHGLTA
FHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLTCDCRLLWLLRLRRHLDFGTSPPAC
AGPQHVQGKSLREFSDILPPGHFTCKPALIRKSGPRWVIAEEGGRAVFSCSGDGDPAPTV
SWMRPPGSWLGRGGRMRVLEDGTLEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQIE
PPNGTLSDPNITMPGTPGPFFLDSRGVAMVLAMGFLPFLTSVTLCFGLIALWSKGKGRVK
HHMTFDFVAPRPSGDKNSGGNRVTAKLF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgctaccctccggcttctctggaaaaccagggaagtccagggatcactatcatctgaag
cctctttcccaaatggtccatgtcatcatctttccaggactcgggatggatgcaacccca
gttccaaagcaagcctggcccccatggcatcccctgcttctcctgctcctcctgcctgga
gggaacaccagcacctgtcctgctgtgtgtgattgcacctcccaaccccgagcagtgatc
tgtgcccacaggcgactggaggctgtccctgggggcctaccactggacactgagctccta
gacctaagtggaaaccgcttgtgggggcttcaacggggcatgctttcccgactgggcctg
ctccaggaactggacctcagccacaaccagctctccacccttgagccaggggcattccat
ggtctacacagtctactaactctgaggctgcaaggcaatcggctccgaattatggggcct
ggcatcttctcaggcctgtctgccctcacactgctggatctccgccttaaccagattgtc
ctcttcctagatggagcttttggtgagttaggcagcctccagcagttggaggtgggggat
aaccacctggtgtttgtagctccaggagcctttgcaggactgactgagctaagcaccctt
accttggagcgttgtaacctcagcacagtacctggtctggcccttgccaggctcccagca
ctagtggcccttaggcttagagaactggatattgagaaactgccagctggggccctgcgg
gggctggggcagctaaaggagctggagatccaccactggccatctttggaggttctggac
ccaggaagcctgattgggctcaatctgagtagcctagccatcacccgctgcaatctgagc
tcagtgcccttccaggcactgcaccacctgagcttcctcagggtcctggatctatcccag
aaccctatttcagccatcccagcccgaaggctcagtcccctggtgcggctccaggagctc
cggttatcaggggcctgcctcacttccattgctgcccaggccttccatggcttgactgcc
ttccacctgttggatgtggcagacaacgcccttcagaccctggaggaaacagcctttcct
tctccagacaaactggtcaccttgaggctgtctggtaaccctctaacctgtgactgccgc
cttctctggctgctcaggctacgaagacacctggactttggcacgtccccccctgcctgt
gctggcccccagcatgtccaagggaagagtttgagggaattttcagacatcctacctcca
ggacactttacatgcaagccagccctgatccgcaagtcagggccacggtgggtcattgca
gaggagggggggcgtgctgttttctcctgctctggagatggagacccagctcccacagtc
tcctggatgaggcctccagggtcttggctgggaagaggtgggagaatgagggtcctagag
gatgggacactggagattcgctctgtgcagctgcgggacagaggagcctatgtctgtgtg
gtaagcaatgtagctgggaatgactccctgagaacctggctggaagtaatacaaattgaa
ccaccaaatggcactctttctgaccccaacatcaccatgccagggaccccagggccattt
tttctagacagtagaggtgtagctatggtgttggcaatgggcttcctacctttccttacc
tcagtgaccctctgctttggcctgattgccctttggagcaagggcaagggccgagtcaag
catcacatgacttttgattttgtagcacctcggccctctggggataagaactctgggggt
aacagggtcactgccaagctattctga
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