Perognathus longimembris pacificus (Pacific pocket mouse): 125359685
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Entry
125359685 CDS
T08928
Symbol
Parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03410
Base excision repair
plop04064
NF-kappa B signaling pathway
plop04210
Apoptosis
plop04217
Necroptosis
plop05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
125359685 (Parp1)
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125359685 (Parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125359685 (Parp1)
04217 Necroptosis
125359685 (Parp1)
09160 Human Diseases
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
125359685 (Parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plop03032
]
125359685 (Parp1)
03036 Chromosome and associated proteins [BR:
plop03036
]
125359685 (Parp1)
03400 DNA repair and recombination proteins [BR:
plop03400
]
125359685 (Parp1)
Enzymes [BR:
plop01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
125359685 (Parp1)
DNA replication proteins [BR:
plop03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
125359685 (Parp1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
125359685 (Parp1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
125359685 (Parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
125359685
NCBI-ProteinID:
XP_048213481
LinkDB
All DBs
Position
11:68220700..68245048
Genome browser
AA seq
1012 aa
AA seq
DB search
MAEASDKLYRVEYAKSGRASCKKCSESIPKDSLRMAIMVQSPMFDGKVPRWHHFSCFWKL
GHCIRQPDVEVDGFSDLRWDDQQKVKKTAEAGGVLGKGADGTGSKAEKTLGDFAAEYAKS
NRSTCKGCMEKIEKGQMRLSKKMLDPEKPQLGMIDRWYHPSCFVKHREELGFWPEYSASQ
LKGFSLLTAEDKEALKKQLPGVKSEGKRKGDQVDGTDDVVKKKSKKEKDKDSKLEKALKA
QNELIWNLKDELKKACSTGDLKELLIFNKQQVPSGESAILDRVADGMAFGALLPCVECAG
QLVFRSDAYYCTGDVTAWTKCMVRTQTPRRKEWVTPKEFREISYLKKLKIKKQDRLFPPE
TSTPAPVAPPPPTASTPTAVDSTPPDKPLCNMKVLTLGKLSRNKDEVKAEVEKLGGKMTG
TASKASLCISSKKEVEKMSKKMEEVKEANVRVVSEDFLQDVSASTKPLQELLSAHSLSAW
GAEVKSEPVEEAPQGKSAAALSKKSKGPAKEEGPNKAEKRMKLTLKGGAAVDPDSGLEHS
AHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEGDKENRYWIFRSWGRVGTVIGSNKLE
QMPSKEDAVEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEIDYGQDEEAVKKLAVSPGTK
SKLPKAVQELVGMIFDVESMKKAMVEYEIDLQKMPLGKLSKRQIQAAYSILSEVQQAVSQ
GSNSSQILDLSNRFYTLIPHDFGMKKPPLLNNTDSVQAKVEMLDNLLDIEVAYSLLRGGS
DDGSKDPIDVNYEKLKTDIQVVDKDSEEAEIIRKYVKNTHATTHNAYDLEVVDIFRIERE
GESQRYKPFRQLHNRRLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYFADMVS
KSANYCHTSQGDPIGLILLGEVALGNMYELKHASHISKLPKGKHSVKGLGKTTPDPSASV
TLDGVEVPLGPGVSSGVSDTCLLYNEYIVYDIAQVNLKYLLKLKFNFKTSLW
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcctcggacaagctctaccgagtcgagtacgccaagagcgggcgcgcctct
tgcaagaaatgcagcgagagcatccccaaggactcgctccgcatggccatcatggtgcag
tcacccatgtttgacgggaaggtcccgcgctggcaccacttctcctgcttctggaagctg
ggccactgcatccggcagcccgacgtggaggtggacggcttctctgatctgcggtgggat
gaccagcagaaggtgaagaagacggccgaggccgggggcgtgctcggcaaaggcgcggat
ggaactggcagcaaggcagaaaagacgctgggcgactttgcagcagagtacgccaagtcc
aacagaagcacgtgcaaggggtgtatggagaagattgagaagggccagatgcgcctgtcc
aagaagatgttggacccagagaagccccagctgggcatgatcgaccggtggtaccacccg
agctgcttcgtcaagcacagggaggagctgggcttctggcccgagtacagtgccagccag
ctgaaaggcttcagcctcctcactgcggaggacaaggaagccctgaagaagcagctgccg
ggagtcaagagtgaaggaaagaggaaaggtgaccaggtggatggcacggacgacgtggtc
aagaagaagtctaagaaagaaaaagataaagacagcaagctggaaaaggccctcaaggcc
cagaacgagctgatctggaacctcaaggatgagctgaagaaggcgtgttccaccggcgac
ctgaaggagctgctcatcttcaacaagcagcaggtgccatccggagagtccgcgatcttg
gaccgagtggcagacggcatggcgtttggggccctccttccctgtgtggagtgcgcaggc
cagctggtcttcaggagcgacgcctactactgcacaggcgatgtcactgcctggaccaag
tgcatggtcaggacacagacgccccgccggaaggagtgggtgaccccgaaggaattccga
gaaatctcttacctcaagaaactaaagatcaaaaagcaggaccggctgtttccccccgag
acaagtacccccgcgccggtggcacccccgccccccacagcctccacccccactgctgtg
gactccaccccgccagataagcctctgtgcaacatgaaggtcctgacgctcgggaagctg
tcgcggaacaaggacgaggtgaaagccgaggttgagaagctggggggcaagatgacgggg
accgccagcaaggcctccttgtgcatcagctcgaagaaggaggtggaaaagatgagcaag
aagatggaggaagtcaaagaagccaacgtccgcgttgtgtcggaggacttcctgcaggac
gtctccgcctccaccaagcccctccaggagctgctgtcggcgcacagcttgtccgcgtgg
ggggcggaggtgaagagcgagcccgtggaggaagccccgcagggcaagtccgcggccgcg
ctctccaagaagagcaagggccccgccaaggaggaaggtcccaacaaggctgagaagagg
atgaagctaaccctcaagggaggggcggccgtcgacccagactcagggctggaacactcg
gcacacgtcctggagaagggcgggaaggtcttcagtgccacgctgggcctggtggacatc
gtgaaagggaccaactcctactacaagctgcagctgctggagggcgacaaggagaacagg
tactggatcttccgatcctggggccgcgtgggcaccgtgattggcagtaacaagctggag
cagatgccgtcgaaggaggatgctgtcgagcacttcatgaagttatatgaggagaagacg
gggaatgcctggcactccaaaaacttcaccaagtaccccaagaagttctaccctctggag
attgactacggccaggacgaagaggcagtgaaaaagctggccgtgagccccggcaccaag
tccaagctcccgaaggcggtccaggagctggtcgggatgatcttcgacgtggagagcatg
aagaaagccatggtggaatacgagatcgaccttcagaagatgcccttgggcaagctgagc
aagaggcagatccaggcggcgtactccatcctcagcgaggtgcagcaggcggtgtcccag
ggcagcaacagctcccagatcctggacctctcaaaccgcttctacaccctgatccctcat
gacttcgggatgaagaagcccccgctcctgaacaacacagacagcgtgcaggccaaagtg
gagatgctggacaacctcctggacattgaggtggcctacagcctgctgaggggcgggtct
gacgacggcagcaaggaccccatagacgtcaactacgagaagctcaagactgacatccag
gtggtggacaaggattcggaagaagctgagatcatcagaaagtacgtgaagaacacgcac
gcgaccactcacaacgcctacgacctggaagtggtggacatcttcaggatcgagcgcgaa
ggggagagccagcgctacaagcccttccggcagctccacaaccgcaggctgctgtggcac
gggtcccgcaccaccaactttgccggcatcctgtcgcaggggctgcggatagccccgccc
gaggcgcccgtgacaggttacatgttcgggaaaggcatctactttgctgacatggtctcc
aagagtgccaactactgccacacgtctcagggggacccgatcggcctgatcctgctggga
gaggtcgccctgggaaacatgtacgagctgaagcatgcttcacatatcagcaaactgccg
aagggcaagcacagtgtcaaaggtttgggcaaaaccactcctgacccctcggccagcgta
accctggacggggtggaggtcccgctggggcccggggtctcctcgggcgtcagtgacacc
tgcctgctgtacaatgagtacatcgtctatgacatcgctcaggtgaacctgaagtacctg
ctgaaactcaagttcaatttcaagacttccctgtggtga
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