Perognathus longimembris pacificus (Pacific pocket mouse): 125359692
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Entry
125359692 CDS
T08928
Symbol
Hcn3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04929
GnRH secretion
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
125359692 (Hcn3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
plop04040
]
125359692 (Hcn3)
Ion channels [BR:
plop04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
125359692 (Hcn3)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
125359692
NCBI-ProteinID:
XP_048213496
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All DBs
Position
11:complement(40224190..40236593)
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AA seq
780 aa
AA seq
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MEAEQRSAAGASGGTTPGLEAAPAAAPAPANAASGRNPASAPEPKRRQLGTLLQPTVNKF
SLRVFGSHKAVEIEQERVKSAGAWIIHPYSDFRFYWDLIMLLLMVGNLIVLPVGITFFKE
ENSPPWIVFNVLSDTFFLMDLVLNFRTGIVVEEGAEILLAPRAIRTRYLRTWFLVDLISS
IPVDYIFLVVELEPRLDAEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHM
TYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVPMLQDFPPDCWVSMNRMVNHSWGRQYSH
ALFKAMSHMLCIGYGQQAPVGMPDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQY
QEKYKQVEQYMSFHKLPADTRQRIHEYYEHRYQGKMFDEESILGELSEPLREEIINFTCR
GLVAHMPLFAHADPSFVTAVLTKLRFEVFQPGDLVVREGSVGRKMYFIQHGLLSVLARGA
RDTRLTDGSYFGEICLLTRGRRTASVRADTYCRLYSLSVDHFNAVLEEFPMMRRAFETVA
MDRLRRIGKKNSMLQRKRSEPSPSSSGGIMEQHLVQHDRDMARGVRGLAPGTGARLSGKP
VLWEPLVHAPLQAAAMTSSVAIALTHQRGSLPLSPDSPATLLARSARRSAGSPASPLVPV
RAGPLLARGPWASTSRLPAPPARTLHASLSRAGRSQVSLLGPPPGGGGRRLGPRGRPLSA
SQPSLPQRATGDGSPGRKASGSERLPPSGLLAKPPGTAQPPRPSVPEPATPRGPQLSANM
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggagcagcggtcggcggccggggccagcggagggacgacccctgggctggaa
gcggcgcctgccgctgctccggctccggcgaacgcggcctcgggtcggaaccccgcgtcg
gcgccggagcctaagaggaggcagcttgggacgctgcttcagcccacggtcaacaagttc
tccctgcgggtgttcggcagccacaaggcggtggaaatcgagcaggagcgggtgaagtca
gcgggggcctggatcatccacccctacagcgacttccggttttactgggatctgatcatg
ctgttgctgatggtggggaacctcatcgtcctgcccgtgggcatcaccttcttcaaggag
gagaactccccaccctggatcgtcttcaatgtcctctctgacactttcttcttgatggat
ctggtgctcaacttccgaacgggcattgtagtggaggagggtgctgagatcctgctggcg
ccgcgtgccatccgcactcgctacctgcgtacctggttcctggttgacctcatctcctct
atcccagtggattatattttcctggtggtggagctagagccaaggctagatgccgaggtc
tataagacagcaagagcgttgcgaatcgttcgcttcaccaagatcctcagcctgctgcga
ctgctccgcctctcccgcctcatccgctacatacaccagtgggaggagatctttcacatg
acctatgacctggccagcgctgtggtgcgcatcttcaacctcattgggatgatgctgctg
ctctgtcactgggatggctgtctgcagttcctggttcccatgctgcaggacttccctccc
gactgctgggtctccatgaaccgcatggtgaaccactcatggggccgccagtattcccac
gccctgttcaaggccatgagccacatgctgtgcattggctatgggcagcaggcacctgta
ggcatgcctgacgtctggctcaccatgctcagcatgattgtgggcgccacgtgctacgcc
atgttcatcggtcatgccactgcactcatccagtccctggactcttcccggcgtcagtac
caagagaagtacaagcaggtggagcagtacatgtccttccacaagctgccagctgacaca
cggcagcgcatccatgagtactacgagcatcgctaccagggcaagatgtttgatgaggag
agcatcctaggcgagctgagcgagccgctgcgggaggagatcattaacttcacctgtcgg
ggcctagtagcccacatgccgctgtttgcccacgctgaccccagcttcgtcaccgcagtg
ctcaccaagctccgctttgaggtcttccagccaggagacctcgtggtgcgtgagggctca
gtgggcaggaagatgtacttcatccagcatgggctgctcagcgtgctggcacgtggtgcc
cgggacacccgcctcactgatggatcctactttggggagatctgcctgctgactcggggc
cggcgcacagccagcgtgagggccgacacctactgccgcctctactcactcagcgtggac
cacttcaatgctgtgctggaggagttccccatgatgcgccgggcttttgagacagtggcc
atggatcgcctgcgccgcatcggcaagaagaactccatgctgcagaggaagcgctctgag
ccgagtcccagcagcagcggtggcatcatggagcagcatttggtgcaacatgacagggac
atggcccggggtgttcgaggcttggccccaggcacaggagcccggctgagtgggaagcca
gtgctgtgggagccactagtgcacgcgccccttcaagcagctgccatgacgtccagtgtg
gccatcgccctgactcaccagcggggctctctgcctctctcccctgactctccagccacc
ctgcttgctcgctctgctcgccgctcggcaggatccccagcctccccactggtgcctgtc
cgagctggtcctctgctggccagggggccgtgggcatccacctcccgtctgcctgcccca
cctgcccgaacactccacgccagcctgtcccgggctggccgctcccaggtgtctctgctg
ggcccacccccaggaggaggtggaaggcggctgggaccccggggtcgcccactctcagct
tctcaaccttctctgcctcagagggcaacaggtgatggctctcctgggagaaaggcttct
ggaagtgagcgcctgcccccctcggggctcctggccaagcctccagggacagcacaacca
cccaggccatcagtgcctgaaccagccaccccccggggcccccagctctccgccaacatg
tga
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