Perognathus longimembris pacificus (Pacific pocket mouse): 125359729
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Entry
125359729 CDS
T08928
Symbol
Nlrp3
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3
KO
K12800
NACHT, LRR and PYD domains-containing protein 3
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04217
Necroptosis
plop04621
NOD-like receptor signaling pathway
plop04623
Cytosolic DNA-sensing pathway
plop04625
C-type lectin receptor signaling pathway
plop05132
Salmonella infection
plop05133
Pertussis
plop05135
Yersinia infection
plop05164
Influenza A
plop05171
Coronavirus disease
plop05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
125359729 (Nlrp3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
125359729 (Nlrp3)
04623 Cytosolic DNA-sensing pathway
125359729 (Nlrp3)
04625 C-type lectin receptor signaling pathway
125359729 (Nlrp3)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease
125359729 (Nlrp3)
05164 Influenza A
125359729 (Nlrp3)
09171 Infectious disease: bacterial
05132 Salmonella infection
125359729 (Nlrp3)
05135 Yersinia infection
125359729 (Nlrp3)
05133 Pertussis
125359729 (Nlrp3)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125359729 (Nlrp3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359729 (Nlrp3)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
plop04054
]
125359729 (Nlrp3)
Membrane trafficking [BR:
plop04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
125359729 (Nlrp3)
Pattern recognition receptors [BR:
plop04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125359729 (Nlrp3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_NLRC3
PYRIN
FISNA
WHD_NOD2
LRR_TMOD-LMOD
LRR_6
LRR_CARMIL
LRR_4
LRR_MHP1-HER1-GIP3
LRR_NLRC4
nSTAND3
NB-ARC
HP_1247_M
WHD_NACHT_C
HTH_NLRC5
AAA_16
Motif
Other DBs
NCBI-GeneID:
125359729
NCBI-ProteinID:
XP_048213570
LinkDB
All DBs
Position
11:7003202..7043881
Genome browser
AA seq
1035 aa
AA seq
DB search
MRMTSTRCKLAHYLEDLEDADLKKFKMHLEDYPVEKGCIALPRGQTEKADHVDLATLMID
FNGEEKAWAMAVRIFAEINRRDLHEKAKQDQLEWDNTHASSLNVVCQEDSIEEEWMGLLG
FLSRISACKKKKDYCKKYRKHVRSRFHCIEDRNARLGESVNLNKRYTRLQLVKEHPSQQE
REHELLAIGRNKTWDSAMSPIKLESLFDPDDEHSEPVHTVVFQGAAGIGKTILARKIMLD
WASGNLFQDKFDYLFYIHCREVSLVMSRSLGDLMVSCCPDPNPPMHKIVQKPSRILFLMD
GFDELQGAFDEHIGALCTDWQKAERGDILLSSLIRKKLLPEASLLITTRPVALEKLQHLL
DHPRHIEILGFSEAKRKEYFFKYFSDEVQAGEAFRLIQENEVLFTMCFIPLVCWIVCTGM
KQQMQSGKGLAQTSKTTTAVYVFFLSSLLQSRGMGQESHLHANLRGLCSLAADGIWNQKI
LFEECDLRNHGLQKVDVSAFLRMNVFQKEVDCEQFYSFIHMTFQEFFAAMYYLLEEEEDE
VMTSSRSRSGSELPDRDVAVLLENYGKFEKGYLIFVVRFLFGLVNQERASYLEKKLSCKI
SQQIRLELLKWIEEKAKAKKLQIQPSQLELFYCLYEMQEEDFVRRAMDHFPKIEVNLSTR
MDHMVSSFCIENCRRVETLSLGFLRNSPKEEEEEEEDRSHLGTDHCVLSGPHAACSHILV
NCFLTSSFCRGLFSVLSTNTNLTELDLSDNVLGDPWMKVLCETLRNPGCNIRRLWLGRCG
LSHQCCFDISSVLSSNQKLIELDLSNNSLGDFGITLLCVGLNHLLCNLKKLWLVSCCLTS
ACCQDLASVLSTNHSLTRLYVGENALGDSGVGILCEKVKHPQCNLQKLGLVNSGLTSICC
SALSSALQTNHNLTHLYLRGNALGDRGLKLLCEGLLHPDCQLQMLELDNCSLTSHSCWGL
STILTSNKSLRKLSLGNNDLGDLGIMMLCEVLKQQGCLLKNLQLCEMYFNYETKRALEAL
QEEKPELTIVFEPSW
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgacgagcacccgctgcaagctggctcactatctggaagacctggaggatgca
gaccttaagaaattcaaaatgcatttagaagattaccctgtagagaagggctgcattgca
ctccctaggggccagacagagaaggcagaccatgtggatctggccacactcatgatcgac
ttcaatggggaagagaaagcctgggccatggccgtgaggatttttgctgaaatcaacagg
agagacctccacgagaaagctaagcaagatcaactagagtgggataatacacatgcttcc
agtctcaatgtggtgtgccaggaagacagcattgaagaggagtggatgggtttattgggg
ttcctttccagaatctcagcttgcaagaaaaagaaagattactgtaagaagtacagaaaa
cacgtgagaagcagattccactgtattgaagataggaatgcacgtctaggtgagagcgtg
aatctcaataaacggtacacacggctgcagctggtcaaggagcatccgagccagcaggag
agggagcatgagctgctggccataggcaggaacaagacatgggacagcgccatgagtccc
attaagctggagtcactgtttgatcctgatgacgaacactctgagcctgttcatactgtg
gtgtttcagggagcagctggcattgggaagacaatattggccaggaagattatgctggac
tgggcatcagggaacctcttccaagataagtttgattatttattctatatccactgtcgt
gaggtgagccttgtgatgtcaaggagcctgggggacctgatggtcagctgttgccctgac
ccaaacccacccatgcacaagattgtgcagaagccctccaggatcctcttcctcatggat
ggttttgatgagctgcaaggtgcttttgatgagcacataggagcactctgcacagactgg
cagaaggctgagaggggagacattctcctgagcagcctcatcagaaagaagctgctgcct
gaggcctctctgctcatcactaccagaccagtggccctggagaagctgcagcacctgctg
gaccaccctcgtcacatagagatcctgggtttctctgaagccaaaaggaaggagtacttt
ttcaagtatttctcagatgaggtacaggccggtgaagcctttaggctgatccaggagaat
gaagtcctcttcaccatgtgcttcatccccttggtttgctggattgtgtgtacagggatg
aagcagcagatgcagagtggcaagggccttgctcagacctctaagaccaccaccgccgtc
tatgtctttttcctgtccagtctcttgcagtcccgaggaatgggccaagaatcccacctc
catgccaatctccgggggctctgctccttggctgctgatggaatctggaaccagaaaatc
ttatttgaggaatgtgacctcaggaatcatggtctgcagaaggtagatgtgtccgctttc
ttgaggatgaacgtgttccagaaggaggtagactgtgagcaattctacagcttcatccac
atgactttccaggagttctttgctgctatgtactatttgctggaagaggaggaagacgag
gtgatgacaagtagcaggtccaggagtggctcagagcttccggatcgagatgtggcggtg
ctcctggagaactatggtaaattcgaaaagggatatctgatctttgtggtccgcttcctc
tttggccttgtaaatcaggagagggcctcttacttggagaagaaattaagttgtaagatt
tctcagcaaatcagactggagctgctgaaatggatcgaagaaaaagccaaggcaaagaag
ctgcagatacagcccagccagctggagctgttttactgcctctatgagatgcaggaggag
gactttgtgagaagggctatggaccacttccccaaaattgaggtcaatctctccaccaga
atggaccacatggtttcttcattttgcattgagaactgtcgcagagtcgaaacactttcc
ctgggctttctccgtaactcccccaaggaagaagaagaggaggaggaagacaggtcacac
ctgggcacagaccactgtgttctctcaggtcctcatgctgcctgctctcacatattagtg
aactgctttctaacatccagcttttgtcggggcctcttctctgttctaagcaccaacacg
aatctcactgagctagacctcagtgacaatgtgctgggggacccatggatgaaggtgttg
tgtgaaactctccggaatcctggctgtaacattcggaggctgtggttggggcgctgtggc
ctttcccatcagtgctgttttgacatctcctcagtcctgagcagcaaccagaagctgata
gaattggacctgagtaacaactccctgggagactttggaatcacactcctgtgtgtgggg
ctgaatcatctactatgcaatctgaagaaactctggttggtcagctgctgcctcacatca
gcttgttgccaggatcttgcatcagtcctcagcaccaatcattccctgaccagactctat
gttggagaaaatgccttgggagattcaggagttggaattttatgtgaaaaggtgaagcat
ccacaatgtaacttgcagaaactggggttggtgaattctggccttacatcaatttgttgt
tcagctctatcttctgcactccaaactaaccacaacctgacacacctttaccttcgaggc
aatgctcttggagacagagggctcaagctactgtgtgaagggctcttgcaccctgattgc
caacttcagatgttggaactagacaactgcagcctcacttcacacagctgctggggtctt
tctacaattctgacctccaataagagcctccgaaagctgagcctaggcaacaatgacctt
ggcgatctggggatcatgatgctctgtgaggtcctgaaacagcagggctgcctcctgaaa
aaccttcagttgtgtgaaatgtatttcaattatgagacaaaacgtgccttagaagcactt
caggaagaaaaaccggagttgaccattgtttttgagccttcttggtag
DBGET
integrated database retrieval system
