Perognathus longimembris pacificus (Pacific pocket mouse): 125359881
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Entry
125359881 CDS
T08928
Symbol
Nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125359881 (Nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
plop04812
]
125359881 (Nedd1)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
125359881 (Nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
125359881 (Nedd1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
125359881 (Nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_DCAF4
eIF2A
WD40_like
Beta-prop_WDR75_1st
PROPPIN
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR35_TULP_N
NBCH_WD40
KNTC1_N
DUF1668
Mto2_bdg
Motif
Other DBs
NCBI-GeneID:
125359881
NCBI-ProteinID:
XP_048213704
LinkDB
All DBs
Position
1:complement(18325847..18364495)
Genome browser
AA seq
669 aa
AA seq
DB search
MCCKLFVGSVMQENLRFASSGDDIKIWDASFMTLVDKFNPHTSPHGISSICWSSNNNFLV
TASSGGDKIVVSSCKCKPVPLLELAEGQKQTCVDLNSTSMYLVSGGLNSTVNIWDLKSKR
LHRSLKDHKNEVTCVTYNWNDCYIASGSLSGEIILHSVTTNISGTPFGHGSNQSVRHLKY
SLFKKSLLGSVSDNGIVTLWDVNSQSPHHNFDSTHKAPASGICFSPVNELLFVTIGLDKR
IILYDTSSKKLVKTLVAEAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLKSPVKTINAH
KTSVQCIAFQYSTALTKSSSNKGCSNKATAVNKRTGNVSTGGGLQNSGIVREAATTSVAT
VPPQPLAPAVGKGTGAIQNKAGLLRSINTDILSKETDGGKSQDFSSFEDTGKSSLGDMFS
PIRDDAVVNKGSDESVGKGDGLDFLPQLNSVFPPRKTPVTSSTLALHSSPLTVFMGSPGK
EENENLDLTTESKKTYLGKPEPKDSFKQFTRLISSGGEPGNLSTSLSTNQTRNFEKFEKP
EKEIESQLIYEPPVNGSSTPDPKIASSVTAGVASSLSEKIVDTIGNNRSNAPLTSVQIRF
IQNMIQETLDDFREACHRDIMNLQVEMIKQFHVQLNEMHSLLERYSVNEGLVAEIEKLRE
ENRRLRAHY
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgtgttgtaaactttttgtaggctcagtcatgcaggaaaacctcagatttgcttcatca
ggagatgatattaaaatatgggatgcttcatttatgacattggtggataaattcaaccct
cacacgtcaccacatggaatcagttcaatttgttggagcagtaataataattttctagtg
acagcatcttctggtggtgacaaaatagttgtttcaagttgcaagtgtaaacctgttcca
cttttggaacttgctgaagggcaaaagcagacatgtgtcgatttaaattccacatctatg
tatttggtaagcggaggcctaaatagcactgttaatatttgggatttaaaatctaaaaga
cttcatcggtctcttaaggatcataaaaacgaagtaacttgtgtaacatacaattggaat
gattgctacattgcttctggatctctaagtggtgaaattattttgcacagtgtaaccact
aacatatctggtactccttttggccatggtagtaatcagtctgttcggcacttgaagtac
tccttatttaagaaatcattactgggcagcgtttcagataatggaatagtaactctctgg
gatgtgaatagtcagagtccacatcataacttcgatagcacacataaagctccagcttca
ggcatctgtttctctcctgtcaatgaattgctgtttgtaaccataggattggacaaaagg
atcatcctctatgatacctcaagtaagaagctagtgaaaactttggtggcagaggcgcct
ctcactgcagtggattttatgcctgatggagccactttggctattggatcttcccgtggg
aaaatatatcagtatgatttaaggatgctaaaatccccagtgaaaaccatcaatgctcac
aagacatctgtgcagtgtatagcatttcagtactccactgctcttactaagtccagttca
aataaaggctgttcaaataaggccacagcagtgaacaagcgaaccggcaatgtgagcact
ggtggagggcttcagaactcgggaattgtcagagaagcagccaccacttctgttgccaca
gttccaccacagcctttggcaccagctgtggggaaaggaacaggtgccattcagaacaaa
gcaggtttgttacgaagcataaacactgatattttatctaaggaaacagatggtggaaaa
agtcaggatttctccagctttgaggatactggcaagagtagtttaggtgacatgttctca
cctatcagagatgatgctgtagttaacaagggaagtgatgaatctgtaggcaaaggagat
ggacttgactttctaccacagttgaattcagtgtttccgccaagaaaaactccagtaact
tccagcactttggcattgcactctagtcctcttactgttttcatgggatcaccagggaaa
gaagaaaatgaaaatcttgatctgacaactgagtctaagaagacatatctgggaaaacca
gaacctaaagactcctttaaacagtttaccaggttgatctcctctggtggtgaacctgga
aatctaagtacctctctatcaactaaccaaacaagaaactttgagaaatttgaaaagcca
gaaaaagaaattgaatcccagttaatatatgaacccccagtcaatggatcctcaactcca
gacccaaagatagcatcctctgtcactgccggagttgccagttcactctcagaaaaaata
gtggataccattggaaacaatcggtcaaatgcaccactgacgtctgtacagatccgtttt
attcagaacatgatacaagaaaccttggatgactttagagaagcatgccatagggacatt
atgaatttgcaagtggagatgattaaacagtttcatgtgcagctgaatgaaatgcactct
ttgctggaaagatattcagtgaatgaaggtttagttgctgaaattgaaaaactaagagaa
gaaaacagaaggctacgggctcactattga
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