Perognathus longimembris pacificus (Pacific pocket mouse): 125359892
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Entry
125359892 CDS
T08928
Symbol
Tdrkh
Name
(RefSeq) tudor and KH domain-containing protein isoform X1
KO
K18406
tudor domain-containing protein 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
plop03036
]
125359892 (Tdrkh)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Gene silencing
piRNA pathway
125359892 (Tdrkh)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
TUDOR
KH_2
KH-I_KHDC4-BBP
KH_Vigilin
KH_KhpA-B
KH_PARP14_8
KH_N4BP1_2nd
KH_PARP14_3
Agenet
Motif
Other DBs
NCBI-GeneID:
125359892
NCBI-ProteinID:
XP_048213710
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All DBs
Position
11:42888176..42906555
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AA seq
561 aa
AA seq
DB search
MSTEQTSWTSLSTIQKIALGLGIPASAAVAYILYRRYRESREERLTFVGEDDIEIEMRVP
QEAVKLIIGRQGANIKQLRKQTGARIDVDTEDVGDERVLLISGFPVQVCKAKAAIHQILT
ENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQ
KEVAAAKHLILEKVSEDEELRKRIAHSAETRVPRKQPISVRREEMAEAGGAGEPASWKNI
SSSMGQTAPLEIPPHKGGGDMAVVGPKEGSWEKPNDDSFQKPGAQTSPEMSMFEIPSPDF
SFHADEYLEVYVSASEHPNHFWIQIIGSRSLQLDKLVSEMTQHYENSLPEDLTVHVGDIV
AAPLSTNGSWYRARVLGTLENGNLDLYFVDFGDNGDCPLKELRALRSDFLSLPFQAIECS
LARIAPSGAQWEEEALDEFDRLTYCADWKPLVAKISSYVQTGISTWPKIYLYDISNGKKL
DIGLELVRKGYAIELPEDMEENRTVPDMLKDMATETDVSLASMLSETKESPEELPHTLSC
LSLSEAASMSGDDNLKDDYLL
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgaacagacttcttggacaagcttgtccactattcagaagatagccctgggc
ctcggcatcccagccagtgcagcagttgcctatatcctataccgcaggtatagagaaagc
agagaagaacggctgacgtttgttggagaggatgacatcgagatagagatgagggttccc
caggaagctgtgaagctcatcattggacggcaaggagccaatattaaacaactgaggaaa
cagaccggtgctcggattgatgttgacacagaggatgtaggcgatgagcgagtgctgctt
atcagtggttttcctgtccaggtgtgcaaggccaaagcagccatccatcagatcctgaca
gagaataccccagtgtccgagcagctctcagttccccagagatccgtgggcagaattata
gggagaggcggcgagacgattcgttctatctgtaaggcctcaggagcaaaaattacctgt
gacaaagaatcagaagggacattactactatcaagactcataaaaatctcaggcacacag
aaggaagtggcagcagctaagcatttgatactggagaaagtttcagaggatgaagaactt
cggaagagaattgcccattctgcagaaaccagagtcccacgcaagcagccaatcagtgtg
agaagagaagaaatggcagaggcaggaggagctggagaaccagcttcatggaaaaacatc
agttctagcatggggcagactgcacctttggagattcctccccacaaaggaggtggtgac
atggctgttgtaggacccaaagaaggttcctgggaaaaacctaatgatgacagctttcag
aaacctggagcccaaaccagtccagagatgtccatgtttgaaatccccagtcctgacttc
agtttccatgctgatgagtacctagaagtctacgtttctgcctctgaacaccctaaccac
ttctggatccaaatcattggctcacgtagcctgcaattggataagcttgtcagtgagatg
acccagcattatgagaatagcctgcctgaagacttgactgtgcatgtaggagacattgta
gcagcacctttatctacaaatggttcctggtatcgagcccgggtccttggaacattggag
aatgggaatttagacctctactttgttgactttggagataatggagattgcccactgaag
gagctcagggctctcaggagtgactttctaagccttccatttcaagcaattgaatgtagt
ctggcaaggatcgccccctcaggtgcacaatgggaagaagaagctttagatgagtttgac
agactcacttattgtgctgattggaagccccttgtggccaagatctctagctacgtccag
actgggatctcaacttggccaaagatctacttatatgatatcagcaatgggaagaaactt
gatattgggctagaattagttcgtaaaggatatgcgattgagcttcctgaagacatggaa
gaaaacagaactgtcccggacatgttgaaggacatggccacagaaacagatgtctctctt
gccagcatgcttagtgagaccaaagagagcccggaagagctaccacataccctgtcctgc
ctcagcttatcagaagctgcctctatgtctggagatgataaccttaaagatgactactta
ctttga
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