Perognathus longimembris pacificus (Pacific pocket mouse): 125359921
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Entry
125359921 CDS
T08928
Symbol
Dennd4b
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
plop04131
]
125359921 (Dennd4b)
Membrane trafficking [BR:
plop04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
125359921 (Dennd4b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_long
SPA
PPR_3
Motif
Other DBs
NCBI-GeneID:
125359921
NCBI-ProteinID:
XP_048213741
LinkDB
All DBs
Position
11:41345529..41360441
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AA seq
1522 aa
AA seq
DB search
MATQASLAPSLSQLTIPDAVSEGGAMAEERPPRLVDYFVVAGLAGNGAPIPEETWVPEPS
GPLRSPRPAEPITDVAVVARALGEEVPQGYTCIQTSAGGHPLELSAGLLGGTQPVICYRR
GRDKPPLVELGVLYEGKERPKPGFQVLDTTPYSHSANLAPPGPGHPRTYLTYRRAAEGAG
LHALGITDLCLVLPSKGEGTPHTYCRLPRNLNPGMWGPAVYLCYKVGLAKANTLAYEAEL
LGRYPEEDNEAFPLPESVPVFCLPMGATIECWPAQTKYPVPVFSTFVLTGAAGDKVYGAA
LQFYEAFPRARLSERQARALGLLSAVERGRALGGRAVRSRRAIAVLSRWPAFPAFRAFLT
FLYRYSVSGPHRLPLEAHISHFIHNVPFPSPQRPRILVQMSPYDNLLLCQPVSSPLPLSG
ASFLQLLQSLGPELAITLLLAVLTEHKLLVHSLRPDLLTSVCEALVSMIFPLHWQCPYIP
LCPLVLADVLSAPVPFIVGIHSSYFDLHDPPVDVICVDLDTNTLFQTEEKKPLSPRTLPR
RPYKVLLATLTNLYQQLDQTYTGPEEETSLEFLLTDYEAVCGRRARLEREVQGAFLRFMA
CLLKGYRDFLRPLTQAPSEGARDVDNLFYLQGFLKSRERSSHKLYSQLLHTQMFSQFIEE
CSFGSARHAALEFFDSCVDKVHPEQEKPEPTALVELEELSGSELTVFITPPEEPPVPEGG
ESTPQYCYDGFPELRAELFESPQEQTGSLPVPGPSRSTPSSPAPRRTKQEMKVAQRMAQK
SATVPELWARCLLGHCYGLWFLCLPAYVRSAPSRVRALHTAYHVLREMESRKVVLPDEVC
YRVLMQLCSHYGQPVLSVRVMLEMRRAGIVPNTITYGYYNKAVLESKWPSGTPGGRLRWA
KLRNVVLGAAQFRQPLRERRQQQQQQQQQQQQNITAHQESGSSQTESYLERPSPTRPLQR
QTTWAGRSLRDPASPTGRLVKSGSLGSARGAQPTVEAGVAHMIEALGVLEPRGSPVPWHD
GSLSDLSLTGEEPASGGSPGGSGSALSAQSTEALEGLSGRGSKASGHQDEAGTPRRGLGA
RLQQLLTPSRRSPASRIPPAELPPDLPPTARRSPMDSLLRPRERPGSTASESSASLGSEW
DLSESSLSSLSLRRSSERLSDTPGPFQPPSLEILLSSCSLCRACDSLVYDEEIMAGWAPD
DSNLNTTCPFCACPFVPLLSVQTLDSRPSASSPKPTPAGASGSKDAPVPGGPGPVLSDRR
LCLALDEPQLCNGHMGGASRRVETGAWAYLSPLVLRKELESLVENEGSEVLALPELPAAH
PIIFWNLLWYFQRLRLPSILPGLVLASCDGPPPSQLSQAPPPWLTPDPASVQVRLLWDIL
TPDPNSCPPLYVLWRVHSQIPQRVVWPGPVPACLSFALLELVLRHVGLNEVHKAVGLLLE
TLGPPPTGLHLQRGIYREILFLTMAALGKDHVDIVAFDKKYKSAFNKLANSMGKEELRQR
RAQMPTPKAIDCRKCFGAPLEC
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggcaacccaggctagccttgctccatctctttctcaattgaccattccagatgcagtg
agtgaggggggggccatggcggaggagcggcccccccggctggtggattatttcgtggta
gctgggcttgcggggaacggagcacccatccctgaggaaacatgggttccagaacccagt
gggcccctgcgctctcctcggccagctgagcccatcacagatgtggccgttgtcgctagg
gcactgggcgaggaggtgccccagggctacacgtgcatccagacttctgctgggggccac
cccttggaactcagtgccggactcctggggggaactcaaccagtcatctgctaccgcagg
ggccgcgacaagccccccctcgttgaactgggggtgttatatgaggggaaggaacgtccc
aagcctggcttccaagttcttgacacgacaccctacagccactcagccaacctggcccct
ccaggccctgggcatccccgcacctacctcacttaccggcgggcagcagagggggcaggg
ctgcatgccttgggcatcactgacctctgcctggtgctgcccagtaaaggcgagggcacg
ccacatacttactgccggttaccccgcaacctcaatcctggcatgtggggcccagcagtg
tacctgtgctacaaggtgggcctggccaaggccaacacgctggcgtatgaggcagagctg
ctgggccgctacccggaggaggacaatgaggcgttcccgctgcccgagtcagtgcccgtc
ttctgcctgcccatgggggccactatcgagtgctggcctgcccagaccaagtacccggtg
cccgtcttctccacctttgtgcttacgggtgctgctggtgataaggtgtatggtgccgcc
ctacagttctacgaggcgttccccagggccaggctgtcggagcggcaggcacgggcactg
ggcctgctgagtgccgtggagcggggccgggcactggggggccgagctgtgcgtagtcga
cgtgccattgctgtgctgtcccgatggcctgccttcccagccttccgagccttcctcacc
ttcctttaccgctactccgtctcaggcccccaccgcctacccttggaagcgcacatctcc
cacttcattcacaacgtcccattcccttccccacagagaccccgcatcctagtgcagatg
tctccctatgacaacctgctcctttgtcaacctgtgtcctcgcccctacccctcagtggt
gccagtttcttgcagctgctgcagagcctgggccctgagctggctatcacactgctgctg
gctgtgctcacagagcacaaactgctggtccattcgctgcggccggacctgctcaccagt
gtctgtgaggccctcgtctcgatgatcttcccactacactggcagtgtccctacattcca
ctttgcccgctggtgctggcagacgtgctgagcgcccctgtgcccttcattgtgggtatc
cactccagttactttgatctgcatgacccccctgtggatgtcatctgtgtcgaccttgac
accaacacactcttccagacagaggaaaagaagcccctctcccctcggaccctgccccgc
agaccctataaagttctgctggccacactgacaaatctctatcagcagctggaccagact
tacactggaccagaggaggagacatctctggaattcctgctgaccgactatgaggcagtg
tgtggtcgccgggcccgcctggagcgggaagttcagggagcgtttctgcgcttcatggcc
tgtctgctcaagggctacagagacttcctgcgtcccctcacccaggccccctctgagggg
gctcgcgatgttgacaacctcttctaccttcagggtttcctcaagtcccgcgaacgctcc
agccacaagctgtactctcagctgctgcacacacagatgttctcacagttcatcgaggaa
tgttcttttggctctgctcgacatgctgccctcgaattctttgactcttgtgttgataag
gtccaccccgagcaggagaagcctgagccgacagccttagtggagctggaggagctgtct
ggaagtgagctcactgtctttatcacaccccctgaggagcctccagtaccagagggtggt
gaatctactccccagtactgttatgatgggttcccagagctacgtgctgagctgtttgag
tctcctcaagagcagacagggtccctgcctgtaccaggcccatcccgtagtacccccagc
agtcctgcccctcgccgtaccaaacaggagatgaaggttgcacagcggatggcacagaag
tcagcaactgtgcctgagctttgggcccggtgcctgctggggcactgctatgggctgtgg
ttcctgtgtctgccagcatatgtgcggtctgcaccctcccgggtgcgggccctacacaca
gcctaccatgtactgcgtgagatggagagccgaaaggtggtgctccctgatgaggtgtgt
taccgggtgctgatgcagctgtgctcacactatgggcagcctgtgttgtctgtacgggtc
atgctggagatgcggcgggcaggcattgtgcccaacactatcacctatggttactacaac
aaggcagtactggaaagcaagtggccgtctggtacaccaggtgggcgcctgcgctgggcc
aagctccgaaatgttgtcctgggggctgctcagttccgccagcccttgagagaacggcgg
cagcagcagcaacagcagcagcaacagcagcagcagaacatcacagcacaccaagagtca
ggcagctcccagacagagtcttatctggagcgaccctccccaacccgcccccttcagcgc
caaactacgtgggctgggcgaagtctgagggaccctgcctcacccactgggcgcctggtg
aaaagtggcagcctgggcagtgcccgaggggcacagcccactgtggaagctggtgtggcc
cacatgatagaggccttaggagtcctggaaccccggggatcacctgtgccctggcatgat
ggaagtctttcagatctgagcctgacaggggaggagccagcaagtggaggcagcccaggg
ggctcaggctcagccctgagtgctcagtccaccgaagctttggaagggctgagtgggcga
gggtccaaggctagtggacatcaggatgaggctggcaccccccgacgagggttgggtgcc
cgcctccaacagctgctcactccttctcgccgctctcctgcctctcgcattcccccagcg
gagctgccccctgacctgcctcccacagcccgccgtagtcccatggacagcctcctgagg
ccccgggagcgcccaggatccactgcctcagagagctcagcctctctgggcagtgagtgg
gacctctcagagtcttctctcagcagcctgagcctgcgccgttcctccgagcgcctcagt
gacacccctggacccttccagccaccttccctggaaattctgctgtctagctgctccttg
tgccgtgcctgtgattcactggtgtacgatgaggaaatcatggctggctgggcacctgat
gactctaacctcaacacaacttgccccttctgcgcttgcccctttgtgcccctgctcagt
gtccagacccttgattcccgacccagtgcctccagccccaagcctacccctgctggtgcc
agtggcagcaaagatgcccctgtgcctgggggtcctggccctgtgctcagtgatcgcagg
ctctgccttgctttggatgaaccccagctctgcaatgggcacatggggggtgcctctcgg
agggttgagactggagcatgggcatacctgagccccctggtgctgcgtaaggagttagag
tcactggttgagaatgagggcagtgaggtattggcattgcctgaactgcctgctgcccat
cccatcatcttctggaaccttctgtggtatttccaacggctgcgcttgcctagtattcta
ccaggtctggtgctggcttcctgtgatgggcccccacccagtcagctctctcaggcccca
cctccttggcttactcctgatccagcctctgtgcaggtgcggctgctgtgggatatcctg
actcctgaccccaatagctgcccacctctctatgtgctctggagggtgcacagccagatc
ccacagcgggttgtatggccaggcccagtacctgcatgtcttagctttgcgttattggag
ttagtgctgcgtcatgttggactcaatgaggtgcacaaggctgtaggacttctgctggaa
actctagggccccctcccactggcctgcacctccagagaggcatctaccgagagatctta
ttcctgacaatggctgctctgggcaaggaccatgtggacatagtggcctttgacaagaag
tacaagtctgccttcaacaagctggccaatagcatgggcaaggaggagctgaggcagcgg
cgggcacagatgcctacccccaaggccattgactgccgaaaatgttttggagcacctctg
gaatgctaa
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