Perognathus longimembris pacificus (Pacific pocket mouse): 125360104
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Entry
125360104 CDS
T08928
Symbol
Capn2
Name
(RefSeq) calpain-2 catalytic subunit
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04141
Protein processing in endoplasmic reticulum
plop04210
Apoptosis
plop04217
Necroptosis
plop04218
Cellular senescence
plop04510
Focal adhesion
plop05010
Alzheimer disease
plop05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
125360104 (Capn2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125360104 (Capn2)
04217 Necroptosis
125360104 (Capn2)
04218 Cellular senescence
125360104 (Capn2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
125360104 (Capn2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125360104 (Capn2)
05022 Pathways of neurodegeneration - multiple diseases
125360104 (Capn2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125360104 (Capn2)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
125360104 (Capn2)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C2: calpain family
125360104 (Capn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
125360104
NCBI-ProteinID:
XP_048214072
LinkDB
All DBs
Position
11:complement(44938409..44992856)
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AA seq
700 aa
AA seq
DB search
MAGIAAKLVKDREAAEGLGSHERAIKYLNQDYEALRNECLEAGALFEDPSFPALPSSLGF
KELGPYSSKTRGIEWKRPTEICADPQFIVGGATRTDICQGALGDCWLLAAIASLTLNEEI
LARVVPLDQSFQENYAGIFRFQFWQYGEWVEVVVDDRLPTKDGELLFVHSAEGSEFWSAL
LEKAYAKVNGCYEALSGGATTEGFEDFTGGIAEWYELRKPPPNLFKIIQKALQKGSLLGC
SIDITSAADSEAVTFQKLVKGHAYSVTGAEEVESGGSLQKLIRIRNPWGEVEWTGKWNDN
CPNWNTVDPEVRERLTRRHEDGEFWMSFGDFLRHYSRLEICNLTPDTLTSDSYKKWKLTK
MDGNWRRGSTAGGCRNYPNTFWMNPQYVIKLEEEDEDQEDGESGCTFLVGLIQKHRRRQR
KMGEDMHTIGFGIYEVPEELTGQTNIHLGKNFFLTTRARERSDTFINLREVLNRFKLPPG
EYILVPSTFEPHKDGDFCVRVFSEKKADYQVVDDEIEANIEEIAVSEEDIDDGFRRLFAQ
LAGEDAEISAFELQTILRRVLAKRQDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYIL
WTKIQKYQKIYRDIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDQLIIDFD
NFVRCLVRLEILFKIFKQLDPEDTGTIELDLISWLCFSVL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgcagccaagctggtgaaggaccgggaggcggccgaggggctgggatcg
cacgagcgagccatcaagtacctcaatcaggactacgaggctctgcggaacgagtgcctg
gaggccggggcgcttttcgaggacccctccttccccgccctcccgtcctctcttggcttc
aaagagttgggaccttactcgagcaaaactcggggtatcgagtggaaacgccccacggag
atctgcgctgatccccagtttattgttggaggagctacccgcacagacatctgccaagga
gccctaggtgactgctggctgctggcagccatcgcctccctcactttgaatgaagaaatc
ctggcccgagttgtccccttagaccagagtttccaggaaaactatgctgggatcttccgc
ttccagttctggcagtatggcgaatgggtggaggtggtggtggatgaccggctgcccacc
aaagacggggagctgctcttcgtgcattcagccgaggggagtgagttctggagcgccctg
ctggagaaggcctatgccaaggtcaatgggtgctacgaagcactttcagggggcgccacc
accgagggcttcgaggacttcaccggtggcattgctgagtggtacgagctgaggaagcct
cctcccaacctgttcaagatcatccagaaggcgctgcagaagggctctctccttggctgc
tctattgatatcaccagtgctgcggactcggaggctgtcacgttccagaagctggtgaag
gggcatgcgtactcggtcaccggagctgaggaggttgaaagtggaggaagcctgcagaaa
ctgatccgcatccgaaatccctggggagaagtcgagtggaccgggaagtggaatgacaac
tgcccaaactggaacacagttgacccagaggtgagggaaagactgaccagaagacatgaa
gatggagagttctggatgtcttttggtgacttccttcgacactattcccgcctggaaatc
tgcaacctgactcctgacaccctcaccagtgacagctacaagaaatggaagctcaccaag
atggatggaaactggaggcggggctccactgcagggggctgcagaaactaccccaacacc
ttctggatgaaccctcagtatgtgatcaagctggaggaggaggatgaggaccaggaggat
ggggagagcggctgcaccttcctggtgggcctcatccagaagcacaggcggcgacagaga
aagatgggcgaggacatgcacaccattggctttggcatctacgaggttccagaggagcta
actggacagaccaacatccacctgggcaaaaacttcttcctcaccacccgagcaagggag
cggtctgacacattcatcaacctccgagaggtgctcaatcgcttcaagctgcccccgggc
gagtacatccttgtgccttccacctttgagccccacaaagacggagacttctgcgtcagg
gtcttctcagagaagaaggctgactaccaagttgttgatgatgaaattgaggccaacatt
gaagagatcgccgtcagcgaggaggacattgacgatggcttccggaggctgtttgctcag
ctggcaggggaggatgcagagatctccgcctttgagctgcagaccatcctgagaagagtt
ctagcaaagcgccaagatatcaagtcagatggcttcagcattgagacctgcaaaatcatg
gtggacatgctagatgaagatgggagtggcaagctggggctgaaggagttctacattctc
tggacgaagattcagaaataccaaaaaatttaccgggatatcgacgttgacaggtctggc
accatgaattcctatgagatgaggaaagccttagaagaagcaggtttcaagctgccttgt
caactccaccaagtcattgtggctcgctttgctgatgaccagctcatcattgattttgat
aattttgttcggtgtttagttcgactggaaatactattcaagatctttaagcagctggat
cctgaggacacaggcacaatagagctggaccttatctcttggctctgtttctctgtactt
tga
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