Perognathus longimembris pacificus (Pacific pocket mouse): 125360177
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Entry
125360177 CDS
T08928
Symbol
Ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04010
MAPK signaling pathway
plop04014
Ras signaling pathway
plop04020
Calcium signaling pathway
plop04151
PI3K-Akt signaling pathway
plop04210
Apoptosis
plop04722
Neurotrophin signaling pathway
plop04750
Inflammatory mediator regulation of TRP channels
plop05200
Pathways in cancer
plop05202
Transcriptional misregulation in cancer
plop05216
Thyroid cancer
plop05230
Central carbon metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125360177 (Ntrk1)
04014 Ras signaling pathway
125360177 (Ntrk1)
04020 Calcium signaling pathway
125360177 (Ntrk1)
04151 PI3K-Akt signaling pathway
125360177 (Ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
125360177 (Ntrk1)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
125360177 (Ntrk1)
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
125360177 (Ntrk1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
125360177 (Ntrk1)
05202 Transcriptional misregulation in cancer
125360177 (Ntrk1)
05230 Central carbon metabolism in cancer
125360177 (Ntrk1)
09162 Cancer: specific types
05216 Thyroid cancer
125360177 (Ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
plop01001
]
125360177 (Ntrk1)
Enzymes [BR:
plop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
125360177 (Ntrk1)
Protein kinases [BR:
plop01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
125360177 (Ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
TrkA_TMD
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
125360177
NCBI-ProteinID:
XP_048214167
LinkDB
All DBs
Position
11:complement(38953150..38974525)
Genome browser
AA seq
773 aa
AA seq
DB search
MSLEARRPAQLGAHGPSATRPERGARRRDAARPAVRAARLASPGYRAGQTAGLADAGICR
RCILPRGPGGAEKPHHREEWPSFCGSRCLPFHSSTQSPESVFQCSGVPVLENGAGSPPTG
DRPVGNPLRCSCGLHWLQRWEEEGLGRLHAQRLQCTRSLALGHNTSCGVPMLKVQVPNTS
VEVGDDVLLQCHVTGQGLHDAGWILTELEGTATVMTSGDLPSLQLKLANVSSDLNRKNVT
CWAENDVGRTELSVQVNVSFPASVHLGMAVRQHQWCIPFSVDGQPAPSLRWLFNGSTLNE
TSFIYTLFLESALTNETMQHGCLRLNQPTHVNNGNYTLVAVNPYGQASAYVMAAFMDNPF
EFNPEDPIPVSFSPVDTNSTSRDPVEKKDETPFGVSVAVGLAVFACLFLSALLLVLNKCG
QRSKFGINRPAVLAPEDGLAMSLHFMTLGGSSLSPTEGKGSGLQGHIIENPQYFSDACVH
HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEVSENARQDFQREAEL
LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG
LGQLLAVASQVAAGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRV
GGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG
RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPVYLDVLG
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggaggcccggcggccggcgcagctgggagcgcacggaccgtcggccacccgg
cccgagcgaggcgcgcgccgccgcgatgctgcgaggccggcggtgcgggcagctcggctg
gcctcgccgggctaccgtgccgggcagactgctggcttggctgatgctggcatctgcagg
cgctgcatcctgccccgagggcctgggggagctgagaaacctcaccatcgtgaagagtgg
ccttcgttttgtggctccagatgccttccgtttcactcctcgactcagtcgcctgaatct
gtctttcaatgctctggagtccctgtcctggaaaacggtgcagggtctccccctacagga
gatagacctgtcgggaaccctctacgatgttcctgtggtctgcactggcttcagcgctgg
gaagaggaggggctgggcagactgcatgcccaaaggctgcagtgtaccagatccctggcc
cttgggcacaacaccagctgtggtgtgcccatgctgaaggtccaagtgccgaacacctct
gtggaagtgggggacgatgtcctgctgcagtgccacgtgactgggcaggggctgcacgat
gctggctggatcctcactgagctagagggcacagccacagtgatgacatctggagatctg
ccttccctgcagctgaagctggccaatgtcagcagtgacctcaacaggaagaatgtgaca
tgctgggcagaaaacgatgtcggccggactgagctctctgtccaggtcaacgtctccttc
cctgccagtgtgcacctaggtatggctgtgaggcagcaccaatggtgtatccccttctct
gtggatgggcagccggcgccctccctccgctggctcttcaatggctccacgctcaatgag
accagcttcatctacacccttttcctggagtcagccttgaccaacgagacgatgcagcat
ggctgccttcgcctcaaccagcccactcacgtcaacaatgggaactacaccctggtggct
gtcaacccttatggccaagcgtctgcctatgtcatggccgccttcatggacaaccctttt
gagttcaaccctgaggaccccattcctgtctccttctcgccagtggacactaacagcacg
tctagagatccagtagagaaaaaggatgaaacaccttttggggtctcggtggctgtgggc
ctggctgtctttgcctgcctgtttctttctgccctgctccttgtgctcaacaaatgtgga
cagaggagcaagtttgggatcaaccgtcccgctgtgctggctccagaggatgggctggcc
atgtcactacatttcatgacattgggtggcagttcgctttccccgactgagggcaaaggc
tctgggctccaaggccacatcatcgagaacccacagtacttcagtgatgcctgtgtccat
cacatcaaacggcgggacatcgtgctcaagtgggaactgggtgagggcgcctttgggaag
gtcttcctcgctgagtgccacaacctgctgcctgagcaggacaagatgctggtggctgtc
aaggcactgaaggaggtgtctgagaacgctcggcaagacttccagcgcgaggctgagctg
ctcaccatgctccagcaccagcacattgtgcgtttctttggcgtctgcaccgagggccgc
ccgctgctcatggtcttcgagtatatgcggcatggggacctcaatcgctttctccgatcc
catgggccagatgccaagctgctggctggtggggaggacgtggctccaggccccctgggt
ctcgggcagctgctggcagtagctagccaggtggcagcaggaatggtgtacctagccagt
ctgcactttgtgcaccgggacttggccactcgcaactgtctggtgggccaaggactagtg
gtcaagatcggggatttcggcatgagcagagacatctacagcactgactactaccgtgtg
ggaggccgcaccatgctgcccatccgctggatgccgcctgagagcatcctgtaccgcaag
ttcaccaccgagagcgacgtgtggagcttcggcgtggtgctctgggagatcttcacctat
ggcaagcagccgtggtaccagctctccaacaccgaggcgatcgagtgcatcacgcaggga
cgggagttggagaggccacgtgcctgcccaccagaggtctacgccattatgcggggctgc
tggcagcgggaaccccagcagcgccacagtatcaaggatgtgcatgcccggctccaagcc
ctggctcaggcaccgcctgtctacctggacgtcctgggctag
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