Perognathus longimembris pacificus (Pacific pocket mouse): 125360490
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Entry
125360490 CDS
T08928
Symbol
Pop1
Name
(RefSeq) ribonucleases P/MRP protein subunit POP1
KO
K01164
ribonuclease P/MRP protein subunit POP1 [EC:
3.1.26.5
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
125360490 (Pop1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plop03009
]
125360490 (Pop1)
03016 Transfer RNA biogenesis [BR:
plop03016
]
125360490 (Pop1)
03029 Mitochondrial biogenesis [BR:
plop03029
]
125360490 (Pop1)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
125360490 (Pop1)
Ribosome biogenesis [BR:
plop03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
125360490 (Pop1)
Transfer RNA biogenesis [BR:
plop03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
125360490 (Pop1)
Mitochondrial biogenesis [BR:
plop03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
125360490 (Pop1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POP1_C
POP1_N
POPLD
Motif
Other DBs
NCBI-GeneID:
125360490
NCBI-ProteinID:
XP_048214411
LinkDB
All DBs
Position
12:complement(30251448..30283568)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSTAKERKHAKKMRNQPTNVTLSSGFVAQRGVRHHNGGGKPFQAQQQESHSGSSRQRQTK
MTSHSLPEPDMNEQSSSKVMFKKKGGWKAGPEGTSQEIPKYITASTFAQARAAEISAMVK
AVTQKSSNSLVFQTLPRHMRRRAMSHNVKRLPRRLREMAQKEAEKAVHQKKEHSKNKSHK
ARRCHLNKTLEFNRRQKKNKWLETHIWHAKRFHMVKKWGYCLGERPTVKSHRACYRAMTN
LCLLQDLSYYCCLELKGKEEEILKALSQMCNIETGLTFAAVHCLSGRRQGSLMLYRANKY
PGGMLGPITFIWNSARIPGDTCENRQLWIWLHPALKQDVLEEIKTVCLCMEPIKPNVCIP
DPLPTPTQEKSQPELADKKSGKKRKRKDDEENLKPIKKIIGDGTRDPCQPRSWISPATGI
IISDLTMEMNRFRLIGPLSHSILTEALKAASVHTEEEDTEKTPHRWWVDTCKNPESVSLH
RRQEAVFELLGGITSPAELPAGTILGLTVGDPRVNLPQKWSKALSNPEKCQDKEKVRQLL
LEGVPAECAHSFIWNQDICESATENKISDQDLNRMRNELLVPGSQLVLGPQESKIPILLI
HQPGKVTGEDRLGWGSGWDVLLPKGWGMAFWIPFIYRGARVGGLKEAMVHSQYKSLPNIP
GDFPDCPAGVQFAEEQAKNFLEKYKRRPPAKRANYVKLGTLAPFHCPWEQLTQDWESKVQ
AQDTSPVALSGEGGDRRRPGAPCADTPEKAPQLSDEAGSSTSDPREPEVMETECQDQEVG
EKVPDQSPGENHTAATKSQLCVLRSRKLLKQLSAWCGPSSENSRTAQWAPGRGQPDLSRA
ACLSVLARFPRALAWVRLSLLQKGSPEPHTMVCIPAEEDLLQLGRDRHYCGPQEPRHSDP
FKSMIVKQKEKKKLLKRQDGGLAPSEALAEGAPVQEALTLGLWSGPLPGVISHCSRVLLG
FVTQGDFSMAVGHGEALGFVSVTGLLDMLCSQPPAARGLVLLRPPASLQYRFARITIEV
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtctactgcaaaggaaagaaaacatgcaaagaaaatgagaaaccagcccaccaatgtc
actctgtcttctggctttgtggctcagagaggtgtaaggcaccataatggagggggcaaa
cctttccaagctcagcagcaagagtctcattctggaagttcaagacagcgacaaaccaag
atgacttcccattcacttcctgagcctgatatgaatgagcagtcttcctctaaagtcatg
tttaagaaaaagggaggctggaaagcaggtccagagggcacctctcaggagattcccaag
tatataaccgcttccacttttgctcaggcacgagctgctgaaatcagtgccatggtaaaa
gctgtgacccagaagtcttctaactcgctggtgttccagactctaccacggcacatgagg
cggagagcgatgagccacaacgtcaaacgccttcccagacggttacgcgagatggcccag
aaggaggcagagaaggctgtacatcagaaaaaagaacactcaaaaaataaaagtcataaa
gctcgaagatgtcacctaaacaagacactagagtttaaccgtagacaaaagaagaacaaa
tggctagaaactcatatctggcatgccaagcgcttccacatggtgaagaagtggggctac
tgcctgggagagaggccgacggtgaagagccaccgggcctgctatcgagccatgacaaac
ctttgcctccttcaggatttatcctactactgttgtctggagttgaagggcaaagaggaa
gaaatactaaaggcactttctcagatgtgtaacatagaaacaggactgacatttgctgca
gttcactgtttgtctggaaggcgccaagggagcctcatgctttaccgggcaaataaatat
cctggaggaatgcttgggcctattacatttatttggaattctgcaaggatccctggtgac
acctgtgagaacaggcagctgtggatctggcttcatcctgctcttaaacaggatgtttta
gaggaaataaaaacagtgtgcctgtgtatggaacccatcaaaccaaatgtctgcatccct
gacccacttcctacaccaacccaagaaaaaagccaaccagagctggctgataagaaaagt
ggcaagaaaagaaaaaggaaagatgatgaagaaaatttgaaaccaattaaaaaaattatt
ggtgatggaactagagacccctgccagccacgttcttggatctctccagccacaggcatc
ataatcagcgatttgacaatggaaatgaacagattccggctgattggtcccctttctcac
tccatcctaactgaggctcttaaagctgcttctgtccacactgaggaagaggacacagag
aagacacctcatcgctggtgggtagacacctgtaagaacccagagagcgtttcccttcat
cgaagacaagaagctgtgtttgaattgttaggagggataacatcaccagcagaacttcct
gcaggtactattctgggcctgacagtgggggatcctcgagtaaatttgcctcaaaagtgg
tccaaagctttgtccaatccagaaaaatgccaagataaggagaaggttagacagctgctt
ctggagggtgtgcctgcggaatgtgcacatagctttatctggaaccaagatatctgtgag
agtgccacagagaataaaatctcagatcaggacttaaaccggatgagaaatgaattgctg
gtacctggatcacagcttgttttaggtccccaggaatccaagatccctatccttttgatt
catcagccaggaaaagtgacaggggaagaccgactgggctggggaagcggctgggacgtc
ctgctcccgaagggctggggcatggctttctggatcccatttatctatcgaggtgccaga
gttggagggctaaaagaggccatggtgcattcccagtataaaagtttgcctaacatccca
ggagattttccagattgccctgctggggttcagtttgctgaagaacaagctaagaatttc
cttgaaaagtacaaaagacgccctcctgccaaacgtgccaactatgttaagcttggcacc
ctggcccctttccactgtccctgggagcagctgacacaggactgggagtccaaagtccag
gcccaagacacatcccctgtggctctcagtggtgagggaggtgacaggagaagacccggg
gcgccttgtgctgacacgcctgagaaagcgccacagctctctgatgaagcagggtcctcc
acaagtgaccccagggagccagaggtcatggaaactgagtgtcaggaccaggaagtgggg
gagaaggttccagaccagagtcctggagagaaccacactgctgccaccaagagtcaactt
tgtgtgcttaggagtagaaagttactgaagcaactgtcagcctggtgtgggcccagctct
gagaacagccggacggctcagtgggctcctggcagaggccagccagacctgagcagagcg
gcgtgcctgtccgtcctggcccgcttccccagggccctggcctgggtccgcttgtccctg
cttcagaagggcagcccagagccgcacaccatggtctgcatccccgctgaggaggatttg
ctccagctagggcgggatcgccactactgtgggccccaggagcccaggcacagtgatccc
tttaagagcatgattgtaaaacaaaaggaaaagaagaaactactgaagaggcaagatgga
ggactcgctccgtctgaggcgctggccgagggggcccctgtgcaggaggctctgacattg
ggcttgtggtcaggccccctccctggtgtgatttcacactgttccagagtcctcctcggc
tttgtcactcagggagatttctccatggctgttggccatggagaagccctgggctttgtg
agtgtgacaggcctactggatatgctgtgcagccagccgccggctgcgaggggtctggtg
ctgctcaggccgcccgcctccctgcagtaccggtttgcaagaattaccattgaggtgtga
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