Perognathus longimembris pacificus (Pacific pocket mouse): 125360499
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Entry
125360499 CDS
T08928
Symbol
Cthrc1
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125360499 (Cthrc1)
Cilium and associated proteins [BR:
plop03037
]
Other cilia and associated proteins
Stereociliary proteins
125360499 (Cthrc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
125360499
NCBI-ProteinID:
XP_048214423
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Position
12:complement(26555655..26564043)
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AA seq
245 aa
AA seq
DB search
MRPPGRAASPPGLLLGPLLLLLALQLPAPSSASETPKGKQKAPIRQREVVDLYNGMCLQG
PAGVPGRDGSPGANGIPGTPGIPGRDGFKGEKGECLRETFEESWTPNYKQCSWSSLNYGI
DLGKIAECTFTKMRSNSALRVLFSGSLRLKCRNACCQRWYFTFNGAECSGPLPIEAIIYL
DQGSPELNSTINIHRTSSVEGLCEGIGAGLVDVAIWVGTCSDYPKGDASTGWNSVSRIII
EELPK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccccgggccgcgccgcctccccacccggcctgctgctcggccctctcctcctg
ttgctggcgctgcagctgcccgcgccgtcgagcgcctcggagacgcccaaagggaagcag
aaggcgccgatccggcagagggaggtggtggacctgtataatggaatgtgtttacaaggg
ccagccggggtcccaggtcgtgatgggagccccggggccaatggcattccaggaacccct
ggcatcccaggtcgggatggattcaaaggcgaaaagggagaatgcctaagggaaaccttt
gaggaatcctggaccccaaactacaagcagtgctcatggagttctctgaattatggcata
gatcttggaaaaattgcagagtgcacattcacaaagatgcgttccaacagtgccctccga
gttttgttcagcggctcacttcggctaaaatgcagaaatgcatgctgtcagcgttggtat
ttcacgttcaatggagcagaatgttcagggcctcttcccattgaagccatcatttattta
gaccaagggagccctgaactgaattcaaccattaatattcatcgtacttcttctgtggaa
ggactctgtgaagggattggtgctggattggtggatgttgctatctgggttggtacttgt
tcagactatccaaaaggagatgcttcgactgggtggaattcagtgtctcgcatcattatt
gaagaactaccaaaataa
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