Perognathus longimembris pacificus (Pacific pocket mouse): 125360552
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Entry
125360552 CDS
T08928
Symbol
Taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
125360552 (Taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125360552 (Taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plop03021
]
125360552 (Taf2)
03036 Chromosome and associated proteins [BR:
plop03036
]
125360552 (Taf2)
Peptidases and inhibitors [BR:
plop01002
]
Metallo peptidases
Family M1
125360552 (Taf2)
Transcription machinery [BR:
plop03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
125360552 (Taf2)
Coactivators
SAGA/TFTC/STAGA complex
125360552 (Taf2)
Chromosome and associated proteins [BR:
plop03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
125360552 (Taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
HEAT_2
Peptidase_M1
Motif
Other DBs
NCBI-GeneID:
125360552
NCBI-ProteinID:
XP_048214559
LinkDB
All DBs
Position
12:15463366..15524457
Genome browser
AA seq
1163 aa
AA seq
DB search
MNRKKGDRGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANLNRIKLNSKQC
RIYRVRINDLEAAFIYNDPTLEVCHSESKQRNLNYFSNAYAAAVTAVDPDAGNGELCIKV
PSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSIEGSMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQQESILALE
KFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIKYNDNRKNKFS
DNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKVDRSYEELQWL
LNMIQSDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEALTGNQEVTSNLSSHAQQ
IGFQNPFSSSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPASSRSSLMPQHS
SGCDITSTTKPQWSMELARKGSGKEPSPLEMSLHPAVAAPLSVFGKESASSKHSDHHHHH
HHEHKKKKKKHKHKHKHKHKTQT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaagggagaccggggcttcgagagcccgcggccgtataaattaacccat
caggtcgtctgcatcaacaatataaacttccagagaaaatctgttgtgggattcgtggaa
ctgactatatttcctacggttgcaaacttgaatagaatcaagttgaacagcaagcagtgt
agaatataccgagtaaggatcaatgatttggaggctgcttttatttataatgatccaacc
ttggaagtttgtcacagtgaatcaaaacagcgaaatctcaattacttttctaatgcttat
gctgctgcagttactgctgttgatcctgatgcaggaaacggagaactttgcattaaggtt
ccatcagagctgtggaaacacgttgatgagttaaaggtcctgaagatacacattaatttt
tctttggatcagccgaaaggaggtcttcattttgtggtacccagtatagagggcagtatg
gcggaaagaggtgctcatgtcttctcttgtgggtatcaaaattccacaagattttggttc
ccatgtgttgattcatactctgaattgtgtacatggaaattggaatttacagtagatgct
gcaatggtggctgtgtccaatggagatctggtagagacagtatatacccatgatatgagg
aagaagaccttccattatatgcttaccattcctacagcagcctccaatatctccttggcc
attggaccttttgaaatactcgtagatccgtatatgcacgaggttactcatttttgttta
cctcaacttcttcctttgcttaaacatacaacatcttatcttcatgaagtttttgaattt
tatgaagaaattcttacgtgtcgttacccgtactcctgtttcaagactgtgttcattgat
gaagcctatgttgaagtggcggcctatgcttccatgagcatttttagcacaaatctactc
cacagtgccatgattatagatgagacacctctgactaggaggtgtctcgctcagtccttg
gcccagcaattttttgggtgtttcatatccagaatgtcttggtctgatgaatgggtgctg
aaaggaatttcaggctatatttatggactttggatgaaaaaaacttttggtgttaatgag
taccgccattggattaaggaggaactagataaaatagtggcatatgaactgaaaactggg
ggagttttactacatcctatatttggtggaggaaaagaaaaggataatccagcatcccac
cttcacttttcgataaagcacccgcatactctctcctgggaatattacactatgtttcag
tgcaaagctcaccttgtgatgagattgattgaaaataggattagtatggagtttatgcta
caggttttcaacaaactgctaagtctggctagtactgcttcatctcagaagttccagtct
catatgtggagccagatgttggtttccacatctggatttttgaaatccatatcaaatgtc
tctggcaaagacattcagcccttaataaagcaatgggtagaccagagtggagtagtaaaa
ttttatggaagttttgcatttaatagaaaacgaaatgtcttagaactggaaataaaacaa
gattatacatctcctggaactcagaaatacgtgggaccacttaaagtgacagtacaggag
ttagatggatctttcaatcatacacttcaaattgaagagaacagccttaaacatgatatc
ccctgccattcaaaaagcagaaggaataagaagaaaaaaatcccactgatgaatggagaa
gaagttgacatggatctttctgcaatggatgcggattcccctttgctgtggataagaata
gatccagatatgtcagttctgaggaaggtagagttcgagcaatccgattttatgtggcaa
tatcaacttcgctatgaaagggatgttgttgcacaacaggaatccatcttggccttggag
aagtttcctacacctgcttcccgccttgcactcactgacatcttagagcaagagcagtgt
ttctaccgagtgagaatgtcagcttgcttttgtcttgcaaagattgcaaattcaatggtg
agcacgtggacaggaccaccagcgatgaaatcactctttactcggatgttttgttgtaaa
acttgtccaaacattgtgaaaacaaacaactttatgagctttcaaagttattttctacaa
aagactatgccagttgcaatggctttgttaagagatgttcataacctttgtcccaaagaa
gtcttaacatttattttagacttaatcaagtacaatgacaacagaaaaaataagttttca
gataactattaccgtgcagaaatgattgatgctctggcaaactctgttactccagcagtc
agtgtgaataatgaagttagaactttggataacttgaatcctgatgtgcgactaattctt
gaggaaatcaccagatttttgaatatggaaaaactacttccaagttacagacataccatt
actgtcagttgcttgagagctataagggtgcttcagaagaatggacatgtgccaagtgat
ccagctcttttcaaatcttatgctgaatatggccattttgtggacatcaggatagcagct
ttggaagcagtagttgactatactaaagtggacaggagttatgaagaactgcagtggcta
cttaatatgattcagagtgatcctgtaccatatgtaaggcacaagatcctaaacatgttg
actaaaaacccaccatttacaaagaacatggaatctcccttatgcaatgaagctctggtg
gatcaactttggaaacttatgaattctggtacttcgcatgactggaggttacggtgtggt
gctgtggacttatatttcacactttttggtctcagtagaccttcctgtttacccttgcca
gagcttggtttggttcttaatctaaaggaaaaaaaagctgtgctgaatcctaccataatt
ccagaggccttaacaggcaaccaagaagttacaagtaatctgagcagtcatgcacagcaa
attggatttcagaacccattttcaagttctcaagatgaggaggagattgatatggatact
gttcatgatagccaggccttcatttcccatcatctgaacatgcttgagaggccatcgact
ccagggctttctaaatatcgaccagctagttcccgatcttctttaatgccccagcattca
tcgggctgtgacatcacatctaccacaaaaccccagtggagtatggaacttgcccgtaag
ggatcaggtaaagaaccatcacctttggagatgagtttacatcctgcggtagcggctcct
ctctcagtatttggtaaggaatctgcatcctccaaacacagtgaccaccatcaccatcat
caccatgaacacaagaagaagaagaagaagcacaagcataagcataaacacaagcacaaa
acccaaacataa
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