Perognathus longimembris pacificus (Pacific pocket mouse): 125360636
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Entry
125360636 CDS
T08928
Symbol
Rp1
Name
(RefSeq) oxygen-regulated protein 1
KO
K19538
retinitis pigmentosa 1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
plop03037
]
125360636 (Rp1)
04812 Cytoskeleton proteins [BR:
plop04812
]
125360636 (Rp1)
Cilium and associated proteins [BR:
plop03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125360636 (Rp1)
Cytoskeleton proteins [BR:
plop04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
125360636 (Rp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DCX
DUF7755
FGF
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
125360636
NCBI-ProteinID:
XP_048214625
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All DBs
Position
12:56421460..56588247
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AA seq
1094 aa
AA seq
DB search
MSETPSTSFSTIHRTSEGQVSSRRPLSIAHPVVAKRISFYKSGDPQFGGVRVVVTPRSFK
TFDALLDNLSRKVPLPFGVRTISTPRGRHHITRLEELEDGESYVCSHGRRVQPVDLDRAR
RRPRPWLSSLALSAPAPRAPAAPRAPRRLLVFRNGDPKTRRTVLLTRRVTQSFEAFLQHL
TVVMQRPVSKLYATDGRKVPSLQAVILSLGAVVAAGKEPFKPGNYDVQKYLLPARLPGIS
HRVRRKGNAKPENRKSVKWKVSIVTSDFPNAGTSSQIYIILYGHHRSSAPIYLYGTDGVG
FQNGHEDIFTLTVGDIGVPFKIRIGHTNSGYAPSWHCKEIRLQNMNCGKQFYIPVQRWLA
RDKEDGEICREFPLLSKGQPVIPVTVYEVFVATGELWNAGTVANVYISIYGEKGDSGSRQ
LLRSKSSFNFLRGHTDTFLLEAVHLGNLFKIVIGHDGLGPGNGWFLDDVVVKDPTTNHEY
AFFCHRWLDQGEDDGKLVRELYARDNSIFSARWKLEHKSKETWVAESWKFTKGNTLQFYN
RLTGGFVRLHPDGTVDAIGEKTDKYGLFDVIFNKGNICSFRSHEMRHLSLALDNGFAGRG
TATELRVIYQHSRCALLESALVPGHTLVFDRQGRRAEESSAGYADLSKEFVILVKGVFLN
SAVILLATSLCQALCLQSDGTCTGAGKQSETSYWKVHKISSGICMFESLKNTQMYLRIKD
GLCDGTGTGGTDCHFKIKKNLEDASISLESVKSPGLFVGLQPDGQAKPVIYTEEENVCFY
PQVIQFGRENPMGMSATPIQGEEIQKSENQKKMLPTSEVKGSLTTSATKQILPSQTSETV
LSEDEWKVSVLTGNTGTQANVTLWVYGDEGVIGPISLSKDSPEQLFLPRQEDEYQVEIKS
IGEIYKIRIGHDGTSRQPEWSLQRVTMQHMKSKKVLDFVANVWLSQIQEDGDIVCELPVM
KEGQPIFPLVRYQVDVYTGQLKQAETESEVSLCLYGERGDSGLRLLHKSNMPVRFQRGQI
DKFQVEAVSLGRLQKVLLRCEACDESQYWYCEKIVVMEPGASAEYIFTCERWLPFMSEGI
IHSEIELYHQGEDQ
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagactccttccacgagtttttccaccatccaccgaacttctgaaggtcaagtt
tcttcccgccgccccttgagcatcgcccatcctgtggtggccaaacgcatcagcttctat
aagagcggggacccccagttcggaggggtcagggtggtggtcaccccgcgttccttcaaa
acctttgatgctttgctggataacttgtccaggaaggtgcccctgcccttcggggtgagg
accatcagcacgccccggggccgccaccacatcacgaggctggaggagctggaggacggc
gagtcctacgtgtgctcgcacggccgcagggtgcagccggtggacctggaccgggcccgc
aggcgcccgcggccctggctcagcagcctcgccctcagcgcgcccgcgccccgcgccccc
gccgcgccccgcgcccccaggaggctcctggtgttccggaatggcgaccccaagaccagg
cgcacggtcctcttgaccaggagggtcacccagagcttcgaggcctttctacagcacctg
acagtggtcatgcagcgcccggtgagcaagctgtacgccacggatggcaggaaggttcct
agcctgcaggcagtgattttgagtttgggagctgtggtggcagcaggaaaagagccattt
aaaccaggaaattatgacgtccagaagtacttgcttcctgctagattaccagggatctct
catcgcgtgcgcaggaagggaaatgctaagccggaaaacagaaagagtgttaaatggaaa
gtttccatagtcactagtgactttccaaatgcagggaccagctcacagatttacattata
ttatatggacatcatagaagttcagcccccatatatctttatggaacagatggagttgga
tttcagaatgggcatgaagacatctttactctcacagttggagacatcggagtgccattt
aagattcgtattggccacactaattctggatatgcaccttcctggcattgcaaggagata
cggttgcagaacatgaattgtggaaaacagttttacatacctgttcaacggtggctggcc
cgagataaagaggatggggaaatctgccgagaatttcctctcttaagtaaaggacagcca
gtcattccagtgacagtatatgaagtgtttgtggcaacaggtgaattgtggaatgctgga
acagtagcaaatgtctacatttccatctatggggaaaagggagattcaggatccagacaa
ctacttagatcaaagagctcctttaattttttaagaggacatactgataccttcctctta
gaagctgtacaccttggaaatttgttcaagattgtgataggtcatgatggacttggccca
gggaatggctggtttcttgatgatgttgtggtcaaagatccaaccacaaaccatgagtat
gccttcttctgtcacagatggctggatcaaggggaggatgatgggaaacttgtcagagaa
ctatatgccagggataatagtatcttctctgcaaggtggaaactagaacataagagtaaa
gaaacatgggtggccgagagctggaagtttacaaaaggaaacactctacagttctacaac
aggctgactggagggtttgtccgtctgcatccggatggcacagttgatgctattggagag
aagacagacaaatatggtctctttgatgttatctttaacaaagggaatatatgtagtttt
cgaagtcatgagatgagacatctttctctagctcttgacaatggatttgctggcagaggc
accgcgactgaactgagggtgatttatcaacacagccgctgtgcacttcttgagtcagca
ctggtacctggtcacacactagtttttgatcgccaaggcagaagagctgaagaatcatca
gcaggctatgctgacctttcaaaagaatttgtgattcttgtcaagggagtgttcctcaac
agtgctgtaattctactggctacaagcctgtgtcaggccctgtgtctccagtctgatggg
acctgcactggagcaggaaaacagtcagaaacatcttactggaaagtgcataaaatcagt
tctgggatttgcatgtttgaaagtctgaagaacacacagatgtatctgaggattaaggat
ggcctatgtgatggaacaggcactggaggtactgactgtcacttcaaaattaagaagaac
ttggaagatgcatctataagcttggaatctgtgaagagccccgggctgtttgttggactt
caaccagatggacaggcaaaaccagttatttataccgaagaagagaatgtttgcttctat
ccgcaagtcatccaatttggcagagaaaacccaatgggaatgtctgcaactcccatccaa
ggagaagagatccagaagtcagagaaccagaagaaaatgctgcccacatctgaggtcaaa
ggatctttaactacgtcagctacaaaacaaattctgccttcccaaaccagtgagactgtt
ctgtcagaagatgaatggaaggtgtcagtgttgacgggaaatactgggactcaagccaat
gtcacactctgggtatacggagacgaaggagtcattggaccgataagtctcagcaaagac
agcccggaacagctcttccttccaaggcaggaggatgaatatcaggttgaaatcaaaagc
attggagagatatataagatcagaataggacacgatgggaccagcagacaaccagagtgg
agtttacagagggttaccatgcaacatatgaagagcaagaaggtactagattttgtagca
aatgtatggctgtctcagatccaagaagatggagacattgtctgtgagcttcctgtcatg
aaagaaggacagcctattttcccattagtgagatatcaagttgatgtctacacaggccag
ttgaaacaagcagaaacggaatctgaggtctctctctgtctctacggggagaggggggac
tctggccttagactgctgcacaagtccaacatgccagtaagattccaaagaggacagatt
gataaatttcaagtagaagcagtgtcacttggaaggctgcagaaggtgctattgcgctgt
gaagcctgtgacgaatcccagtactggtactgtgaaaagatcgtagtcatggaacccggt
gcctccgctgagtacatcttcacctgtgaaagatggcttcccttcatgtctgagggcata
attcactcagaaattgaactgtatcatcaaggtgaggatcaatga
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