Perognathus longimembris pacificus (Pacific pocket mouse): 125360717
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Entry
125360717 CDS
T08928
Symbol
Col14a1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
125360717 (Col14a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
plop00535
]
125360717 (Col14a1)
Proteoglycans [BR:
plop00535
]
Extracellular matrix (ECM) proteoglycans
Others
125360717 (Col14a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Arylsulfotran_N
VWA_3
DUF5581
Motif
Other DBs
NCBI-GeneID:
125360717
NCBI-ProteinID:
XP_048214719
LinkDB
All DBs
Position
12:complement(15105826..15282270)
Genome browser
AA seq
1797 aa
AA seq
DB search
MKIFQCKMRYWLIPAFVAIAYFCTIVQGQVAPPTRLRYNMLSHDSIQISWKAPRGKFGGY
KLLVTPTSGGKTNQLNFQNTATKAIIQGLMPEQNYTVQLIAYNKDKESKPAQGQFRIKDL
EKRKDSTKPRVKVVDRGNGSKPSSPEEVKFFCQTPAIADIVILVDGSWSIGRFNFRLVRL
FLENLITAFNVGSEKTRIGLAQYSGDPRIEWHLNAFSTKEEVIEAVRNLPYKGGNTLTGL
ALNYIFENSFKPEAGSRTGVSKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
NELQEIASEPDSTHAYNVAEFDLMHTVVESLTRTVCSRVEEQDKEIKASAIATIGPPTEL
VTSEVTARSFMVNWTHAPGRVEKYRVVYYPTRGGKPEEVVVDGSVSSTVLKNLMSLTEYQ
IAVFAIYAHTASEGLRGTETTYALPMASDLELYDVTENSLRVKWDAVPGATGYLILYAPL
TEGLAGDEREMKIGETHTDIELTGLFPNTEYTVTVYAMFGEEASDPVTGQETTLPLSPPR
NLRISNVGSTSARLSWDPASRKISGYRIVYTSADGTEINEVEVDPITTFPLKGLTPLTEY
SIAIFSLYEEGQSLPLAGVFTTEEVPAQQYLEIDEVKTDGFRVTWHPLSAEEGPHKLMWI
PVYGGKTQEIALIEEQDSYVIEGLEPGTEYEVSLLAILDDGSESEVVTAVGTTLDSFWTE
QPTTVEPTIPVTSVLQTGIRNLVVDDETTSSLRVSWDISDSNVEQFRVTYMTAQGDPTEE
VVGTVMVPGSQNSLLLKSLLPDMEYKVTVTPLYTDREGVSVSAPGKTLPSSGPQNLRVSE
EWYNRLRITWDPPAGLVKGYRIVYKPVSIPGPTLETFVGADVNTILITNLLSGMDYNVKI
FASQAEGFSDALTGVVKTLYLGVTDLQAHQIEMTSLCVGWQVQRHATAYRIVLESLQDTQ
TQESTVGGGTNRHCFYGLQPDTEYKISIYTKVQELEGPSVSIMQRTQSLPTQPPTFPPTI
PPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDRIGADGTQVAMVQFTD
DPRTEFKLNAYKTKETLLDAIRHISYKGGNTKTGKAIKHVRDTLFTAEAGTRRGIPKVIV
VITDGRSQDDVIKISREMQSDGYNIFAIGVADADYSELVNIGSKPSGRHVFFVDDFDAFK
KIEDELITFVCETASATCPLVHKDGIDLAGFKMMEMFGLVEKDFSSVEGVSMEPGTFNLY
PCYHLHKDALVSQPTKYLHPEGLPSDYTISFLFRILPETPQEPFALWEILNKNSDPVVGI
ILDNGGKTLTYFNYDRSGDFQTVTFEGPEIRKIFHGSFHKLHVVVSKTLAKVVIDCKQVG
EKAINASANITVDGVEVLGRMVRSRGPTGNSAPFQLQMFDIVCSTSWANRDKCCELPSLR
DEESCPDLPHSCSCSAANEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPVGP
QGPPGPQGPSGLSIQGMPGMPGDKGEKGDTGLPGSQGVPGGVGSPGRDGSPGLRGFPGKD
GSSGPPGPPGPIGIPGAPGVPGMMGSMGPQGALGPPGVPGAKGERGERGDLQSQAMVRAV
ARQVCEQLIQSHMARYTAILNQIPSHSSSTRTIQGPPGEPGRPGSPGTPGEQGPPGAPGF
PGNAGVPGTPGERGLTGFKGERGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRG
PPGHLGVPGPQGPSGQPGYCDPSSCSSYGVGAPHPDEPEFTPVHDEQEAMELWGSGI
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttccagtgcaaaatgagatactggctgattccagcttttgtggcaattgct
tatttctgcaccatcgtccagggtcaagtggctccgcccacaaggttaagatataacatg
ctctcacatgacagtatacagatctcatggaaggctccaagagggaaatttggtggatac
aaactccttgtgactccaacttcaggggggaaaaccaatcaactgaattttcagaacact
gcaacgaaagcaattattcagggtcttatgcccgaacagaattacactgttcaactcatc
gcatacaataaagacaaagaaagcaagccagcccaaggacagttcagaattaaagattta
gaaaaaagaaaagattcaaccaagcccagagtcaaggttgtcgaccgaggaaatgggagt
aaaccatcttcacccgaagaagtgaaattcttctgtcagaccccggcgattgctgacatt
gtgatattggtggatggctcgtggagtattgggagattcaactttcgactggttcggctt
ttcttggaaaatctcatcacagcgttcaatgtgggctctgagaagactcgaattggtctt
gcccagtatagcggtgaccccagaatagaatggcatttgaacgcttttagcacaaaagag
gaagtgattgaagctgtccgaaacctcccatacaagggaggaaatactctcacaggtctt
gctttgaactacatctttgaaaatagctttaaaccagaagctggatccaggaccggagtc
tccaaaattggcattttaatcacagatggaaaatcccaagatgatattatcccaccatcc
agaaaccttcgtgagtctggtgtggaactgtttgctataggggtgaaaaacgcggacttg
aatgagctgcaggaaatcgcctctgagccggacagcactcatgcgtacaacgttgcggaa
tttgacctgatgcacacggtggtggagagcctgacgaggacggtgtgctcccgggtggaa
gagcaagacaaggagatcaaagcctcagctattgccaccattgggccgcctacggaactg
gttacttctgaagtcactgccagaagctttatggttaattggacacatgccccaggacga
gtggaaaaatacagagttgtgtattatcctacccgaggtggaaaaccagaggaggtggtg
gtggatggaagtgtgtcttctactgtattgaaaaacttgatgtctttaactgaataccag
atagcagtctttgccatatatgcccacactgctagtgagggcctgagagggacggaaacc
acgtatgctttacccatggcttcagatctcgaactgtatgatgtgactgagaatagtctt
cgtgtcaaatgggacgcagtgcccggggccacaggatacctgatcctctatgctcctctc
acagagggtcttgctggggatgaaagagagatgaaaattggagagactcacacagacatc
gagttgactggattgttccccaatacagaatacacagtcacagtgtatgccatgtttgga
gaagaggccagtgaccctgttacaggacaagaaaccacactacctttatcaccaccaaga
aatctgagaatctccaatgttggctctacaagtgctcgattaagctgggacccagcatcg
agaaagatcagtggttaccgaattgtatataccagtgcagatggcaccgaaatcaacgag
gttgaagttgatcccattactacattccctctgaaaggcttgacaccactcacagaatat
tccattgccattttctctctctatgaggagggccagtctttgcctctggctggagttttc
accacagaggaagttcctgcccagcagtatttggagattgatgaggtgaagacggatggt
tttagagtcacctggcatcctctctctgccgaggaagggccacacaagctgatgtggatt
ccagtgtatggtgggaagacccaagagattgccttaatagaagagcaggactcatatgtg
atcgaaggcttggagccaggcacggaatatgaagtctccctcttggctatacttgatgac
gggagcgagagcgaggtggtgactgctgttggaaccacactggacagtttttggacagag
caacccacaactgtagaacctactatacctgtgacttcagttctccagacaggaatcaga
aacctggtggtagatgatgaaaccacttctagtctgcgggtatcatgggacatttctgac
agcaatgtggagcagtttagggtgacctacatgacagctcaaggggaccccacggaagaa
gtggtaggaacggtaatggtgcctggcagccagaacagcctccttctcaagtctctgctt
ccagacatggaatacaaagtcacagtgacacccctctacaccgacagagagggggtcagc
gtctccgcccctggaaaaaccttgccatcctctggtccccaaaatttgagagtctcagaa
gaatggtacaaccgtctgcgtatcacgtgggatcccccagctggcctcgtaaaaggctac
aggattgtctacaaacccgtcagcattcctggccctaccctggaaactttcgtgggtgct
gatgttaacaccattttgatcacgaatctcctcagtggcatggactacaatgtgaagata
tttgcctcccaggctgaaggctttagcgacgctctgacaggggtggtgaaaacattgtac
ttgggtgtgaccgatctccaagcccaccagattgaaatgaccagcttgtgtgttggatgg
caggtgcagcgtcacgccacagcctacaggatagttctagaatccctccaggatacacaa
acacaagaatctactgtgggaggagggacaaacaggcattgcttctatggacttcagcct
gatactgaatataagatcagcatttacacaaaggtccaggagcttgagggacctagtgtg
agcatcatgcagagaacacaatctctccctactcagccaccaacgtttcctccaaccatt
ccaccagcaaaagaagtatgcaaagctgcaaaggcagacttggtatttatggtggatgga
tcctggagtattggagatgacaattttaataagatcatcaactttctgtacagcactgtt
ggagctctagacaggattggtgcagatggaacacaggtcgcaatggttcagttcactgat
gaccccagaacagaattcaaactaaatgcttacaaaaccaaagagactcttcttgatgca
attaggcacatttcatacaaaggaggaaatacaaaaacaggaaaagcaatcaaacacgtt
cgagatactttgttcactgcagaggcaggtacaagaagaggcatcccaaaggttattgtg
gttataactgatggaaggtcacaagatgatgtcatcaaaatctccagggagatgcaatct
gatggctacaacatttttgcaatcggtgtggcggatgcggactactctgagttggtgaac
attggcagcaagccgagtgggcgccatgtcttctttgtggatgactttgatgccttcaag
aaaattgaagatgaattgattacttttgtctgtgaaaccgcatcagcaacttgcccactg
gtgcacaaggatggcattgaccttgcaggatttaagatgatggaaatgtttggcttagtt
gaaaaggatttttcatcagtggaaggggtgtctatggagcctggtaccttcaacttgtat
ccgtgttaccatctccataaagatgctctggtttcccagccaaccaagtatctgcatcca
gaaggattgccttctgactacacaatcagttttctattccgaattcttcctgaaacccca
caggaaccatttgctctttgggaaattttaaataaaaattctgacccagtggttggaatc
attttggacaatggtgggaaaactctaacgtatttcaactatgaccgcagtggggatttt
caaactgttacttttgaagggcccgaaattaggaaaattttccatggaagctttcacaag
ctacatgttgttgtcagcaagactttggccaaagtggttattgactgcaagcaagtgggt
gagaaggcaataaatgcgtcagccaacatcactgtggatggtgtagaagtacttgggagg
atggttagatcgagaggacctactgggaactctgcacccttccagttacagatgtttgac
atcgtttgttctacatcctgggccaatagagacaaatgttgtgaacttcctagcctgagg
gatgaagagtcctgcccagacctcccacattcttgctcctgttctgcagccaatgaagtg
gcactaggaccagctggcccaccaggtggtccaggacttcggggaccgaaaggccaacaa
ggtgaacagggtccaaagggaccagagggcccgcgaggtgaaacaggtcctgttggacct
cagggtcctcccggaccccaaggaccaagtggtctatccattcaaggaatgcctggtatg
ccaggtgataaaggagagaaaggtgacactggtctccctggctcacagggtgtcccaggc
ggtgtgggttccccaggacgtgacggctcaccaggcctgaggggatttcctggaaaggac
ggttcctccggccctccaggaccaccagggccaattggaattcctggagctcctggagtc
ccagggatgatgggcagcatgggaccgcagggcgccctggggcctccgggtgtccctgga
gcaaagggagagcgcggtgagcgaggtgacctgcagtctcaggccatggtgagggccgtg
gcacgtcaagtgtgtgagcagctcatccagagtcacatggctaggtacacagccatcctc
aaccagattcccagccattcctcatccaccaggaccatccaggggcctcctggggagccg
gggagaccaggctcacctggaacccctggcgaacaaggacccccaggtgcaccaggcttc
ccaggaaatgcaggtgttccagggaccccaggagaacgaggtctcactggtttcaaggga
gagagaggaaatccaggcattggaactcaaggcccaagaggcccacctggaccagcagga
ccttccggggaaagtcggcctggcagccctgggcctcctggctctcctggaccaagagga
ccaccaggtcacttgggggtacctggaccacaaggtccttctggccagcctggatattgt
gatccctcatcctgttcttcctatggcgtaggagctcctcatcccgatgagcctgagttc
acccctgtccacgacgagcaggaagctatggaactgtggggctctgggatctga
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integrated database retrieval system
