Perognathus longimembris pacificus (Pacific pocket mouse): 125360824
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Entry
125360824 CDS
T08928
Symbol
Cdh17
Name
(RefSeq) cadherin-17
KO
K06811
cadherin 17, LI cadherin
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
125360824 (Cdh17)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
plop04515
]
125360824 (Cdh17)
Cell adhesion molecules [BR:
plop04515
]
Cadherins
Major cadherins
125360824 (Cdh17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_4
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
125360824
NCBI-ProteinID:
XP_048214906
LinkDB
All DBs
Position
12:33343040..33394914
Genome browser
AA seq
831 aa
AA seq
DB search
MTGACLRSLCLLMLCLTTGYGQDGKFSGPLKPMTFSIFEGQEPSQIIFQFKANPPAVTFE
LTGETDDIFKIQPDGLLYYTRALDRETRATHHLQLAALNAQGAIVEGPVPIIIEVKDIND
NRPTFLQEKYEGSVRQNSRPGKPFMYVNATDLDDPSTPNAQLFYQIVIQLPKINNIMYFQ
INNQTGAISLTLEGSRELDPVKNSNYNLVVSVKDMGGQNENSLSDTASVDITVKENIWKA
PDVVEVVENSTDPHPIKITQVQWNEPGAHYSLAQKEKLETFPFSIDQEGNIYVTQPLDRE
EKDSYVFYAAAKDEYGKLLSYPLQVHVRVIDINDNPPTCPSPVTVFEVQENEILGSSIGI
FTAHDLDEANTANSILRYKIVEQTPKVPIDGLFMIEEYEGKFQLAKQSLKKQDSPQYNLT
VEVSNGDFKTLCSVEINVIDINDQIPVFEKSDYGVLTFPEDAAVGSVILTIQATDADEPF
TGSSRILYRVIQGDSKGRLGIDTDPQTNAGYVTIKKPLDFETAAISTIVVQAENPEPLVS
GVVYNTSSFTSFKLIVTDVNEAPVFSQNVFQEKVMEDVAVGTKVGNVTAKDPEGLDLRYS
LRGDTRGWLKIDAVTGEIFSVAPLDRETENVYRVQVVATELGGSSLSSMSHFHLTLTDVN
DNPPRLAREYTGLFFCHPISAPGSLIFEATDDDQQSFRGPQFTFALGSESLKRDWEVSRI
NGTSARLSTKHTNFEEKVYEIPIRINDGGRPPLEGTVSLSVTFCKCVEGSCFRQAGHQPG
IPTVGMAVGILLTTFLVIGIILAVVFIRMRNDKGKDNVENAQSPEATPLRR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgactggagcctgtcttcgctctctgtgtcttcttatgctgtgtttgacaactggatat
ggtcaagatgggaagtttagtggacctctgaagcccatgacattttctatatttgaaggc
caagaaccaagtcaaatcatattccagtttaaagccaatcctcctgccgtgacctttgaa
cttacgggagagaccgatgacatatttaagatacaaccagatggactgctgtattacacg
agagccctggacagagagacaagagctacgcaccatcttcagcttgctgccctgaatgct
cagggagccatagtggagggcccagtccccatcatcatagaagtgaaggacatcaatgac
aaccgacccacatttcttcaggagaagtatgaaggctcagtaaggcagaactcgcggcca
gggaaacccttcatgtatgtgaatgcaacagacctggacgatccaagtacccccaatgcg
caactcttttaccaaattgttatccagcttcccaagatcaacaacatcatgtactttcag
atcaacaaccagacaggagcaatatcacttaccctagaagggtctcgggaactggatcca
gttaagaattctaactacaatcttgtggtctccgtgaaggacatgggaggccagaatgag
aattccctcagcgacacggcgtctgtagatattaccgtgaaagagaatatctggaaagca
ccggacgtcgtggaggttgtagaaaactccactgaccctcaccccatcaagatcactcag
gtgcagtggaatgagccaggtgcacactattccttagctcagaaggagaaactggaaaca
ttcccattttcaattgatcaggaaggaaatatttatgtgacccagcctttggatcgagaa
gaaaaggattcgtatgttttttatgcagctgcaaaggatgagtatggaaaactactttca
taccctctgcaagttcatgtgagagttatagacattaacgacaacccaccaacatgtcca
tctccagtaactgtatttgaggtccaggagaatgaaatactgggtagcagtattggaatc
ttcactgctcacgacttagatgaagccaacactgccaatagcattttaaggtacaaaatt
gtggaacaaactcccaaagttcctatagatggactcttcatgattgaagaatatgagggg
aagttccagttagctaaacagtccttgaagaagcaggatagtcctcagtacaacttaaca
gtagaggtgtccaatggagatttcaagaccctctgttctgtggaaatcaacgtaatcgat
atcaatgatcagattcctgtctttgaaaaatcagattatggggtcctgactttccctgaa
gacgcagctgttgggtctgtcatcttaaccattcaagccaccgatgctgatgagccattc
actgggagttctagaatcctgtatcgggttatccaaggagacagcaagggaagactagga
attgacacagatccccaaaccaatgcaggatatgtcacaattaaaaagcctcttgatttc
gaaacagcagctatttccaccatcgtggtccaagcagagaatcctgagcctctggtgtcg
ggggttgtttacaacaccagttcttttacctccttcaaacttattgtgacagatgtgaat
gaagcacctgtgttttcccaaaatgtattccaagaaaaagtcatggaggatgtggctgtg
ggcactaaagtgggcaatgtgactgccaaggatcccgaaggtctggacctaaggtactca
ctgaggggcgacacgagaggttggcttaaaattgacgctgtcactggtgagatcttcagt
gtcgccccgctggacagggaaacggaaaatgtgtaccgagtgcaagtggtggccactgaa
ttaggtgggtcctccttgagctccatgtcacacttccacctgacgcttacagatgtgaat
gacaacccacctcgcctagccagagagtacaccggcttgttcttctgccatcccatctct
gcccctggaagtctcattttcgaggccactgatgacgatcagcaatcatttcgaggtccc
cagtttacatttgccttgggcagtgaaagcttgaaaagagactgggaagtttccagaatc
aatgggactagtgccagactttccaccaagcacacgaattttgaggagaaagtctatgag
atccccatccgcatcaacgacgggggtcggccgcccttggagggcactgtgtctttatca
gtgactttctgcaagtgtgtggaaggaagctgcttccggcaagcaggtcaccagcctggg
atacccacggtgggcatggcggtcggtatactgctgactacctttctggtcataggtata
attttagcagttgtgtttattcgcatgaggaatgataaaggcaaagataatgttgaaaac
gcccagtcacctgaagctacccctctgagacgctga
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