KEGG   Perognathus longimembris pacificus (Pacific pocket mouse): 125360978
Entry
125360978         CDS       T08928                                 
Name
(RefSeq) 26S proteasome complex subunit SEM1-like
  KO
K10881  26 proteasome complex subunit DSS1
Organism
plop  Perognathus longimembris pacificus (Pacific pocket mouse)
Pathway
plop03050  Proteasome
plop03440  Homologous recombination
plop05010  Alzheimer disease
plop05012  Parkinson disease
plop05014  Amyotrophic lateral sclerosis
plop05016  Huntington disease
plop05017  Spinocerebellar ataxia
plop05020  Prion disease
plop05022  Pathways of neurodegeneration - multiple diseases
plop05169  Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:plop00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    125360978
  09124 Replication and repair
   03440 Homologous recombination
    125360978
 09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    125360978
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125360978
   05012 Parkinson disease
    125360978
   05014 Amyotrophic lateral sclerosis
    125360978
   05016 Huntington disease
    125360978
   05017 Spinocerebellar ataxia
    125360978
   05020 Prion disease
    125360978
   05022 Pathways of neurodegeneration - multiple diseases
    125360978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plop03019]
    125360978
   04131 Membrane trafficking [BR:plop04131]
    125360978
   03051 Proteasome [BR:plop03051]
    125360978
   03400 DNA repair and recombination proteins [BR:plop03400]
    125360978
Messenger RNA biogenesis [BR:plop03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     125360978
Membrane trafficking [BR:plop04131]
 Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    125360978
Proteasome [BR:plop03051]
 Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     125360978
DNA repair and recombination proteins [BR:plop03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     125360978
SSDB
Motif
Pfam: DSS1_SEM1
Other DBs
NCBI-GeneID: 125360978
NCBI-ProteinID: XP_048215132
LinkDB
Position
12:complement(13378121..13378486)
AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNHLRAEL
EKHGYKMETS
NT seq 213 nt   +upstreamnt  +downstreamnt
atgtcagaaaaaaagcagccggtagacttgggtctcctggaggaggatgacgagttcgag
gagtttcctgccgaagattgggctggtttggatgaagatgaagatgcacatgtctgggag
gataactgggatgatgacaatgtagaagatgacttctccaatcacttacgagctgaacta
gagaaacatggttataagatggagacttcatag

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