Perognathus longimembris pacificus (Pacific pocket mouse): 125361081
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Entry
125361081 CDS
T08928
Symbol
Vcpip1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
plop01002
]
125361081 (Vcpip1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
plop04121
]
125361081 (Vcpip1)
Enzymes [BR:
plop01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125361081 (Vcpip1)
Peptidases and inhibitors [BR:
plop01002
]
Cysteine peptidases
Family C64
125361081 (Vcpip1)
Ubiquitin system [BR:
plop04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
125361081 (Vcpip1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
125361081
NCBI-ProteinID:
XP_048215274
LinkDB
All DBs
Position
12:complement(66034933..66068119)
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AA seq
1240 aa
AA seq
DB search
MSQPPPPPPPPPLPPPPPPPPPPPEAPHSPPSVAAAAAAAAAAAAAAAAAAAGAAPGGLS
KRRDRRILSGSCPDPKCQARLFFPASGSVSIECTECGQRHEQHQLQGVEEVTDPDVVLHN
LLRNALLGVTGAPKKNTELVKVMGLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGEL
FDCALLGDRAFLIEPEHVNTVGYGKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDG
HCLVHAVSRALVGRELFWHALRENLKQHFQQHLAQYQALFHDFIDAAEWEDIINECDPLF
VPPEGVPLGLRNIHIFGLANVLHRPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGRDG
HLNKPICIAWSSSGRNHYIPLVGIKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGC
VIGGDRSLQDKYLLRLVAAMEEVFMDKHGIHPSLVADVHQYFYRRTGVIGIQPEEVTAAA
KKAVMDNRLHKCLLCGALSELHVPPEWLAPGGKLYNLAKSTHGQLRPDKNYSFPLNNLVC
SYDQLKDILVPDYGLSNLTACNWCHGSSVRRVRGDGSIVYLDGDRTNSRSTGGKCGCGFK
HFWDGKEYDNLPEAFPITLEWGGRVVRETVYWFQYESDQSLNSNVYDVAMKLVTKHFPGE
FGSEILVQKVVHTILHQTAKKNPDDYTPVNIDGAHAQRVGDVQAQEESQLPTKIILTGQK
TKTLHKEELNMSKTERTIQHNITEQASAMQKRKTEKLKQEQKGQPRTVSPSAIRDGPSSA
PATPTKAPYSPTASKEKKIRITTNDGRQSMVTLKSSTTFFELQESIAREFNIPPYMQCIR
YGFPPKELMPPQAGMEKEPVPLQHGDRITIDVLKSQAEGGQSAAAHSAHTVSQEESAVTG
KLSSKELLEQTDKEMYSLCLLATLMGEDVWSYAKGLPHMFQQGGVFYNIMKKTMGMADGK
HCTFPHLPGKTFVYNASEDRLELCVDTAGHFPIGPDVEDLVKEALSQVRAEATTRSRESS
PSHGLLKLGSGGVVKKKSEQLHNVTAFQGKGHSLGTASSNPHLDPRGRETPIVRKYTTGT
DFSNSSTKTELPVFPVAPGNNELIRIAPGVVTMRDRQLDPDVIEAQRKKLQEMVSSIQAS
MDKHMRDQNTEQSTSELPQRKVEIVSSSARSGNLQTGLSESFSLTGGTEKLNTEITDSCV
GDAMGAAFATRSKAQTENSVEEPEEMDSQDAEMTEPMDHS
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagccgccgccgccgcccccgccgccgccgctgccgccgccgccgccgccgccg
ccgcccccccccgaggctccgcacagcccgccgtccgtggcggcggcggcggcggcggcg
gccgcggcggcggcggcggcggcggcggcggcggcgggggccgccccgggggggctctcc
aagcgccgggaccgcaggatcctttccgggagctgcccggaccccaagtgccaggcgcgc
ctgttcttcccggcctcgggttccgtcagcatcgagtgcaccgagtgcgggcagcggcac
gagcagcaccagctgcagggcgtggaggaggtgaccgacccggacgtggtgctgcacaac
ctgctgcggaacgcgctgctcggggtgacgggggcgcccaagaagaacacggagctggtc
aaggtgatgggcctctccaactaccactgcaaactgctgtcgcccatcttggctcgctac
ggaatggacaaacagacgggccgggccaagctgctccgggacatgaaccagggcgagctg
ttcgattgcgccctgctcggggaccgcgccttcctcatcgagcccgagcacgtgaacacg
gtgggctacggcaaggaccgctccgggagcctcctctatctgcacgacacgctcgaggac
atcaagcgcgccaacaagagccaggagtgcctcatcccggtgcacgtggacggggacgga
cactgcctcgtgcacgccgtgtcccgggccctcgtaggccgggagctcttctggcatgcc
ctgagagagaatctcaaacagcactttcagcagcacctggcccagtatcaagccctgttc
catgacttcatcgatgccgccgagtgggaggacattattaacgagtgcgatcctctgttc
gtgccacccgagggcgtgcccttaggcctgaggaacatccacatatttggcctcgccaac
gtgttacatcgccccataatcctgttagattccctgagcggcatgagaagctccggcgac
tattcagccaccttcctgcccgggctcatacccgcggagaagtgtactggaagagatggt
cacttgaacaagccaatctgcatcgcgtggagtagctccggtagaaaccattatatcccc
ctagtcggcataaaaggggccgccctgcccaaactgcctatgaatttgcttccaaaagca
tggggtgtgcctcaagatcttattaagaagtacatcaaacttgaggaggacggcggttgt
gttattggaggagacagaagtctgcaagataagtacttacttagacttgttgctgctatg
gaagaagtctttatggacaaacacggcatccatccgagtctggtagctgacgtccatcaa
tatttctacagaaggactggtgtgataggaattcagcctgaagaagtaacagcagctgct
aaaaaagcagtgatggataatcgccttcacaaatgtttgctctgcggtgccctttctgaa
cttcatgttcctcctgagtggttggctccaggagggaaactgtataacctggcaaaaagt
actcatggacagctgaggcctgacaaaaattacagctttcctttgaacaatttggtttgc
tcctatgatcagttgaaagacattctggtaccagactacggattgagtaatttaacagct
tgtaattggtgccatggctcgtctgtgcgaagggtcagaggagacggatctattgtgtat
ttggatggagacagaactaattctaggtccaccggtggcaaatgtggttgtggattcaaa
cacttttgggatggtaaagagtatgacaatctaccagaagctttccctattactttggaa
tggggaggaagagtggtccgagaaacagtttattggttccagtacgaaagtgatcagtct
ttgaatagtaatgtttatgatgttgcaatgaaacttgttaccaagcactttccaggtgaa
tttgggagcgaaatcctagttcaaaaagttgtccacactatattgcatcaaactgccaaa
aagaaccctgatgattacacgcctgtaaacatagatggtgctcatgcccagagagttgga
gatgtgcaagcacaagaagagtctcagctccctactaaaattatccttactggacagaaa
acaaagactttgcacaaggaagagttgaacatgagtaaaaccgaaagaactattcagcat
aatattacagagcaggcttctgcaatgcagaaacggaaaacagaaaagttaaaacaagaa
caaaaagggcaacctagaactgtttctcccagtgccatccgagacggtccatcctctgca
cctgctacccctactaaggcgccctattcaccgacagcctctaaggagaagaagatccga
ataacaactaatgatggacggcagtccatggttacacttaagtcttcaacaacctttttt
gaacttcaggaaagtatagccagagaattcaacattcctccatatatgcagtgcattcgg
tatggctttcctcctaaagagctaatgccgccgcaggcaggcatggaaaaggagcctgtc
cccttacagcacggtgacagaattacaatagacgttctaaaaagccaagcggaaggtggt
cagtctgctgccgcacactcggcccacaccgtcagccaagaggagagtgctgtgactggc
aaactgtcatccaaagaacttctggagcagaccgacaaagagatgtactccttgtgtctt
ctggcgacattaatgggagaagatgtatggtcttatgcaaaaggacttcctcacatgttt
cagcagggtggtgtattctacaatattatgaagaaaaccatggggatggccgatggcaag
cactgtacttttccacatctacctggcaaaacctttgtgtataatgcttctgaagacaga
ctggagctgtgtgtggatactgcgggacatttccccattggtcctgatgttgaagattta
gttaaagaggctttaagtcaggttcgagcagaggctactacaagaagcagggaatcaagt
ccttcacatgggctgttaaaactaggtagtggtggagtagtgaaaaagaaatctgagcaa
cttcataatgtaacagcctttcagggaaaggggcattctctaggaactgcatctagtaac
ccacaccttgatccaagaggtagggaaactccaattgtgagaaagtatactacagggaca
gacttcagtaatagttccactaaaacagagcttccggtattcccagttgctccaggtaac
aatgagcttattcgaatagctcctggagtagtaacaatgagagacaggcagcttgatcct
gatgtgattgaggcccagagaaaaaaattgcaggaaatggtttcttctattcaggcttca
atggacaagcacatgcgggatcagaatacagagcagtcaacatctgaacttcctcaaaga
aaagtagaaattgtaagttcttctgcgcggtctggaaatcttcagactggcttgtctgaa
tctttttctttaactggtggcactgaaaaattgaatacagaaataactgatagctgtgtg
ggagatgcaatgggagcagcatttgccacaaggtcaaaagcacaaacggaaaattctgtg
gaagagcccgaagagatggatagtcaagacgccgagatgactgagccaatggatcactct
tga
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