Perognathus longimembris pacificus (Pacific pocket mouse): 125361154
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Entry
125361154 CDS
T08928
Symbol
Ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
plop
Perognathus longimembris pacificus (Pacific pocket mouse)
Brite
KEGG Orthology (KO) [BR:
plop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plop03400
]
125361154 (Ap5b1)
DNA repair and recombination proteins [BR:
plop03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
125361154 (Ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
125361154
NCBI-ProteinID:
XP_048215319
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Position
13:complement(58442698..58456470)
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AA seq
870 aa
AA seq
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MGPPGRDAWAQRLAAFRASPAALLDGPDGERVGRELLSDLRSEKLGEPTKASLLALSMEF
AAQLWPDAAAAEAAAASLLDTLVLLPPRPSALRRPLLLAATAVLAAGGALGPTSGASARL
LPLLLGLACGRDVGRSFGPASEQRALQAAACECLRELESCRPGLLGGALGPLRSLLGQGG
PVQPLSLLLALALRHALAAGGGSGAGVRSLLAAGVSSGAGAWDWTLAPADAPLQPQAPCW
PAAEGEQGPAEGEPSPEDTRELRATVAQLLDTSYLLTPAAQAQLLWLLGCGLRAQPPVLF
KPQLVRLLGTAQLALLHSVLALKAAFGEALFTAQDEALLLRRLALAAQHPSLPQPTHLFY
LHCILTFPENWPLGPEGEEAAPLLLGPQLGRSLMPSLLHEPMALLARLHLLCLRCAEEEE
EEERGPAQSPRRYLEELLAGLRGRAALEGGPRALATLCFQASYLVASRLAGQPTVVTPLI
HGLAQLYRARPALAPHFVDLLDQVGPELREPLREALRQEVVSQPVGSEALRWHLQVLAKV
AEGDTQNVTLGFLHAAAAHCTDWGLQQALLRVCRVLLQSGGGAGLADLLQALARQLEDPD
GRDHARLYYILLAHLSGHKLAMALGPSVAAPALASSLVAENQGFTATLMVQEALAPIQLS
LGPPRAKGSLPVLQLQAEAQEPVYSLELRFHVDGQLYGRLGAVHVPCLAPGRPTHPLLLS
LQPRCPAPARLEVQALYTTPAGLTCHARLPPLAVSFAHLFLPFPQAPKGAEADFFEELWD
SCLPKGAESRVWCPLGPQSLEVLVARHLAPFVVVAQPPASYHIAVRLPPDSMLLLRLEAA
GGAGVPVALRTDDWAVLPLAGDYLRGLAAC
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggggcccccgggccgggacgcctgggcccagcgcctcgccgccttccgagccagcccg
gccgccctcctggacggccccgacggcgagcgcgtgggccgcgagctgctgagtgacctg
aggagcgagaagctgggcgagccgaccaaggcctccctgctggccctgagcatggagttc
gcagcccagctgtggcccgacgccgccgcggccgaggcggccgccgcctccctgctggac
accctggtcctgctgcccccgcggccctcggccctgcgccggcccctgctgctggccgcc
accgcggtcctggcggcagggggcgccctgggccccacctcgggggcgtcggcccggctc
ctgccgctgctgctcggcctggcctgcggccgcgacgtggggcggagcttcggccccgcc
tcggagcagcgcgccctgcaggccgcggcgtgcgagtgcctgcgcgagctggagagctgc
cggcccgggctgctggggggcgccctcgggccgctgcggagcctgctggggcaggggggc
cccgtccagcccctcagcctgctgctggcgctggcgctgcgccacgcgctggcggccggc
ggcggctcgggggccggcgtgcgcagcctgctggccgcgggggtctcctccggggccggc
gcctgggactggacgctagccccagccgatgcccccctccagccccaggcgccctgctgg
cctgccgccgaaggggagcagggccctgcagagggcgagcccagccccgaagacacccgc
gagctgagggccactgtggcccagctgctggacacctcgtacctgctcactcccgcggcc
caggcccagcttctgtggctgctgggctgcggtctgcgggcccagccgccggtgctcttt
aagccacagctggttcgcttgctgggaaccgcgcagctggccctgctgcactctgtgctg
gccctcaaggcggcctttggtgaggccctgttcaccgcccaggacgaggccctgctgctc
cgccgcctcgccctggccgcccagcacccgtccctgccccagcccacccatctcttttac
ctgcactgtattctgaccttccccgagaactggcccctgggccccgagggggaggaggcg
gcccccctgctgctgggaccccagctgggccgcagcctcatgcccagcctcctgcacgag
cccatggccctcctggcccgcctgcacttgctgtgtctgcgctgtgctgaagaggaggag
gaggaggagaggggcccagctcagagcccacggcggtacctggaggagctcctggccggc
ctgcgggggagggcggctctggaggggggcccccgggcactggccaccctctgtttccag
gcttcctacctggtggccagccgcctggccgggcagcccaccgtggtaacgcccttgatc
cacggactggctcaactttaccgcgctcggcctgcgcttgcgcctcactttgtggacctg
ttggatcaggtggggcctgaactcagggagcccctcagagaggcgctgaggcaggaagtc
gtgtcccagccagtcgggtctgaagctcttcgctggcatctgcaggtgttggcaaaagtg
gcagaaggggacactcagaacgtcaccctcggcttcctgcacgccgcagctgctcactgc
accgactggggcctgcagcaggcgctcctgcgggtctgccgggtcctgctgcagagcggc
ggcggcgccggcctggcggatttgctgcaggcgctggccaggcagctagaggaccctgat
gggcgcgatcatgcccgcctctactacatccttttggcccacctgtcagggcacaagttg
gcgatggctctgggcccctcagttgctgcgcccgcactggcctcctcgttggtggctgag
aaccagggcttcacagcgacactgatggtacaggaggccctggcccccatccagctgagc
ctggggcccccgagggcgaaaggctcgctccccgtgctgcagctccaggcggaggcccag
gagcccgtctactctctggagctgcgcttccatgtggacgggcagctctatggccgcttg
ggggccgtccacgtgccctgcctggctcccggccgccccacccaccccctgctcctgtcg
ctgcagcctcggtgcccagcccccgcgcggctggaggtccaggccctctataccacccct
gcgggcctcacctgccacgcccgcctgccgcccctggccgtgagcttcgcccacctcttc
ctgccctttccccaggctcccaagggggccgaagccgacttctttgaggagctctgggac
tcttgcctaccaaagggtgcagaaagccgtgtgtggtgcccacttgggccacagagcctg
gaggttttggtggcccgccacctagcgccctttgtggtagtggcccagcctcccgccagc
taccacatcgcggtgcggctgcccccggactccatgctgctgctgcggctggaggcggcc
ggcggggctggagtgcctgtcgctctgcggacagacgactgggctgtgctgcccctggct
ggcgactacctccgtggacttgcggcctgctga
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